FFCP PHASE1:Hg19::chr22:31739411..31739446,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23598 | |EntrezGene=23598 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=13071 | |HGNC=13071 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=130bp_to_ENST00000465287_5end | |association_with_transcript=130bp_to_ENST00000465287_5end | ||
|cluster_id=chr22:31739411..31739446,- | |||
|coexpression_cluster_id=C43 | |||
|description=CAGE_peak_5_at_PATZ1_5end | |description=CAGE_peak_5_at_PATZ1_5end | ||
|id=chr22:31739411..31739446,- | |id=chr22:31739411..31739446,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0007297;2.05e-18;2!UBERON:0005754;4.08e-10;1!UBERON:0008425;4.46e-10;1!UBERON:0008801;7.49e-10;1!UBERON:0006298;1.68e-09;1!UBERON:0007123;1.01e-07;5 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019=DOID:0050619;7.49e-10;1!DOID:1357;7.49e-10;1!DOID:5093;2.22e-09;4!DOID:1612;2.22e-09;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0050619,8.17e-10,1;DOID:1357,8.17e-10,1;DOID:5093,2.08e-09,4;DOID:1612,2.08e-09,4 | |||
|ontology_enrichment_uberon=UBERON:0004119!2.52e-11!169;UBERON:0000925!2.52e-11!169;UBERON:0006595!2.52e-11!169;UBERON:0001007!8.60e-11!155;UBERON:0001555!8.60e-11!155;UBERON:0007026!8.60e-11!155;UBERON:0004921!4.81e-10!129;UBERON:0004185!4.81e-10!129;UBERON:0007023!8.29e-10!115;UBERON:0000464!7.04e-09!104;UBERON:0006947!7.75e-09!3;UBERON:0004054!7.75e-09!3;UBERON:0001004!8.02e-09!72;UBERON:0000077!1.23e-07!130;UBERON:0000466!1.49e-07!126;UBERON:0000065!4.45e-07!53;UBERON:0002048!5.42e-07!22;UBERON:0000117!5.42e-07!22;UBERON:0000171!5.42e-07!22;UBERON:0000170!5.42e-07!22;UBERON:0005597!5.42e-07!22;UBERON:0000118!5.42e-07!22;UBERON:0000915!9.65e-07!52 | |||
|ontology_enrichment_uberon_v019=UBERON:0006947;8.75e-27;3!UBERON:0004054;8.75e-27;3!UBERON:0005904;2.99e-20;4!UBERON:0000341;1.29e-17;2!UBERON:0001829;1.29e-17;2!UBERON:0001044;3.15e-13;6!UBERON:0003293;3.15e-13;6!UBERON:0003294;3.15e-13;6!UBERON:0010047;3.15e-13;6!UBERON:0003408;3.15e-13;6!UBERON:0000167;3.15e-13;6!UBERON:0000974;3.72e-13;6!UBERON:0001000;3.74e-10;1!UBERON:0005352;3.74e-10;1!UBERON:0000998;4.08e-10;1!UBERON:0006868;4.08e-10;1!UBERON:0001301;4.86e-10;1!UBERON:0001831;7.49e-10;1!UBERON:0001764;7.49e-10;1!UBERON:0001825;7.49e-10;1!UBERON:0001567;7.49e-10;1!UBERON:0001736;1.68e-09;1!UBERON:0000058;2.06e-08;10!UBERON:0000310;4.65e-08;10!UBERON:0002046;1.01e-07;5!UBERON:0003135;1.09e-07;11!UBERON:0001443;2.28e-07;11!UBERON:0000161;2.69e-07;19!UBERON:0000166;2.69e-07;19!UBERON:0004175;8.88e-07;21 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0006947,8.77e-27,3;UBERON:0004054,8.77e-27,3;UBERON:0005904,3.00e-20,4;UBERON:0001829,1.04e-17,2;UBERON:0000341,1.23e-17,2;UBERON:0001044,2.84e-13,6;UBERON:0003293,2.84e-13,6;UBERON:0003294,2.84e-13,6;UBERON:0010047,2.84e-13,6;UBERON:0000167,2.84e-13,6;UBERON:0001000,3.74e-10,1;UBERON:0005352,3.74e-10,1;UBERON:0000998,4.09e-10,1;UBERON:0006868,4.09e-10,1;UBERON:0001301,4.87e-10,1;UBERON:0001764,8.17e-10,1;UBERON:0001825,8.17e-10,1;UBERON:0001831,8.91e-10,1;UBERON:0001567,8.91e-10,1;UBERON:0008801,8.91e-10,1;UBERON:0001736,1.15e-09,1;UBERON:0006298,1.15e-09,1;UBERON:0003408,3.64e-08,10;UBERON:0002530,3.69e-08,59;UBERON:0000310,4.11e-08,10;UBERON:0000974,4.54e-08,10;UBERON:0002046,8.83e-08,5;UBERON:0004117,8.83e-08,5;UBERON:0007689,8.83e-08,5;UBERON:0007123,8.83e-08,5;UBERON:0003091,8.83e-08,5;UBERON:0003135,1.09e-07,11;UBERON:0001443,2.04e-07,11;UBERON:0007023,4.22e-07,114 | |||
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| ||
|short_description=p5@PATZ1 | |short_description=p5@PATZ1 | ||
}} | }} |
Latest revision as of 20:29, 19 September 2015
Short description: | p5@PATZ1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_PATZ1_5end |
Coexpression cluster: | C43_ductus_seminal_duodenum_temporal_gall_prostate_bladder |
Association with transcript: | 130bp_to_ENST00000465287_5end |
EntrezGene: | PATZ1 |
HGNC: | 13071 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
male genital duct | 8.77e-27 | 3 |
internal male genitalia | 8.77e-27 | 3 |
duct of male reproductive system | 3.00e-20 | 4 |
major salivary gland | 1.04e-17 | 2 |
throat | 1.23e-17 | 2 |
saliva-secreting gland | 2.84e-13 | 6 |
gland of oral region | 2.84e-13 | 6 |
gland of foregut | 2.84e-13 | 6 |
oral gland | 2.84e-13 | 6 |
oral cavity | 2.84e-13 | 6 |
vas deferens | 3.74e-10 | 1 |
spermatic cord | 3.74e-10 | 1 |
seminal vesicle | 4.09e-10 | 1 |
seminal fluid secreting gland | 4.09e-10 | 1 |
epididymis | 4.87e-10 | 1 |
maxillary sinus | 8.17e-10 | 1 |
paranasal sinus | 8.17e-10 | 1 |
parotid gland | 8.91e-10 | 1 |
cheek | 8.91e-10 | 1 |
parotid gland primordium | 8.91e-10 | 1 |
submandibular gland | 1.15e-09 | 1 |
submandibular gland primordium | 1.15e-09 | 1 |
gland of gut | 3.64e-08 | 10 |
gland | 3.69e-08 | 59 |
breast | 4.11e-08 | 10 |
neck | 4.54e-08 | 10 |
thyroid gland | 8.83e-08 | 5 |
pharyngeal pouch | 8.83e-08 | 5 |
thyroid diverticulum | 8.83e-08 | 5 |
pharyngeal pouch 2 | 8.83e-08 | 5 |
thyroid primordium | 8.83e-08 | 5 |
male reproductive organ | 1.09e-07 | 11 |
chest | 2.04e-07 | 11 |
adult organism | 4.22e-07 | 114 |
Ontology term | p-value | n |
---|---|---|
paranasal sinus cancer | 8.17e-10 | 1 |
maxillary sinus cancer | 8.17e-10 | 1 |
thoracic cancer | 2.08e-09 | 4 |
breast cancer | 2.08e-09 | 4 |