FFCP PHASE1:Hg19::chr22:29137782..29137837,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=11200 | |EntrezGene=11200 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16627 | |HGNC=16627 | ||
|TSSclassifier=strong | |||
|UniProt=O96017,C9JFD7,B7ZBF8,B7ZBF2,F8WCV2 | |UniProt=O96017,C9JFD7,B7ZBF8,B7ZBF2,F8WCV2 | ||
|association_with_transcript=0bp_to_ENST00000328354,ENST00000348295,ENST00000382565,ENST00000382566,ENST00000382578,ENST00000382580,ENST00000398017,ENST00000405598,ENST00000425190,ENST00000433028,NM_001005735,NM_007194,NM_145862,uc003adt.1,uc003adu.1,uc003adv.1,uc003adw.1,uc003adx.1,uc003ady.1,uc003adz.1_5end | |association_with_transcript=0bp_to_ENST00000328354,ENST00000348295,ENST00000382565,ENST00000382566,ENST00000382578,ENST00000382580,ENST00000398017,ENST00000405598,ENST00000425190,ENST00000433028,NM_001005735,NM_007194,NM_145862,uc003adt.1,uc003adu.1,uc003adv.1,uc003adw.1,uc003adx.1,uc003ady.1,uc003adz.1_5end | ||
|cluster_id=chr22:29137782..29137837,- | |||
|coexpression_cluster_id=C2184 | |||
|description=CAGE_peak_1_at_CHEK2_5end | |description=CAGE_peak_1_at_CHEK2_5end | ||
|id=chr22:29137782..29137837,- | |id=chr22:29137782..29137837,- | ||
|ontology_enrichment_celltype=CL:0000066!1.79e-15!254;CL:0000012!2.44e-14!682;CL:0000548!2.66e-14!679;CL:0000004!2.66e-14!679;CL:0000255!2.66e-14!679;CL:0000063!4.35e-09!578;CL:0000003!9.72e-09!722 | |ontology_enrichment_celltype=CL:0000066!1.79e-15!254;CL:0000012!2.44e-14!682;CL:0000548!2.66e-14!679;CL:0000004!2.66e-14!679;CL:0000255!2.66e-14!679;CL:0000063!4.35e-09!578;CL:0000003!9.72e-09!722 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,8.03e-16,253 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!2.59e-46!235;DOID:14566!2.12e-44!239;DOID:0050686!5.07e-25!137;DOID:2531!3.83e-24!51;DOID:0060083!3.83e-24!51;DOID:0050687!1.30e-23!143;DOID:1240!7.93e-22!39;DOID:305!4.98e-19!106;DOID:8692!1.37e-18!31;DOID:3095!3.00e-07!22;DOID:2994!3.00e-07!22 | |ontology_enrichment_disease=DOID:162!2.59e-46!235;DOID:14566!2.12e-44!239;DOID:0050686!5.07e-25!137;DOID:2531!3.83e-24!51;DOID:0060083!3.83e-24!51;DOID:0050687!1.30e-23!143;DOID:1240!7.93e-22!39;DOID:305!4.98e-19!106;DOID:8692!1.37e-18!31;DOID:3095!3.00e-07!22;DOID:2994!3.00e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:8692;4.24e-18;31!DOID:1240;3.15e-17;39!DOID:2531;3.07e-15;51!DOID:0060083;3.07e-15;51!DOID:3095;2.79e-07;22!DOID:2994;2.79e-07;22!DOID:305;5.67e-07;106 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.47e-46,235;DOID:14566,2.03e-44,239;DOID:0050686,4.95e-25,137;DOID:2531,3.74e-24,51;DOID:0060083,3.74e-24,51;DOID:0050687,1.27e-23,143;DOID:1240,7.77e-22,39;DOID:305,4.89e-19,106;DOID:8692,1.35e-18,31;DOID:3095,2.98e-07,22;DOID:2994,2.98e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@CHEK2 | |short_description=p1@CHEK2 | ||
}} | }} |
Latest revision as of 14:36, 19 September 2015
Short description: | p1@CHEK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_CHEK2_5end |
Coexpression cluster: | C2184_diffuse_iPS_acute_Hodgkin_nonsmall_H9_HES3GFP |
Association with transcript: | 0bp_to_ENST00000328354, ENST00000348295, ENST00000382565, ENST00000382566, ENST00000382578, ENST00000382580, ENST00000398017, ENST00000405598, ENST00000425190, ENST00000433028, NM_001005735, NM_007194, NM_145862, uc003adt.1, uc003adu.1, uc003adv.1, uc003adw.1, uc003adx.1, uc003ady.1, uc003adz.1_5end |
EntrezGene: | CHEK2 |
HGNC: | 16627 |
UniProt: | O96017C9JFD7B7ZBF8B7ZBF2F8WCV2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 8.03e-16 | 253 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.47e-46 | 235 |
disease of cellular proliferation | 2.03e-44 | 239 |
organ system cancer | 4.95e-25 | 137 |
hematologic cancer | 3.74e-24 | 51 |
immune system cancer | 3.74e-24 | 51 |
cell type cancer | 1.27e-23 | 143 |
leukemia | 7.77e-22 | 39 |
carcinoma | 4.89e-19 | 106 |
myeloid leukemia | 1.35e-18 | 31 |
germ cell and embryonal cancer | 2.98e-07 | 22 |
germ cell cancer | 2.98e-07 | 22 |