FFCP PHASE1:Hg19::chr7:125078119..125078156,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-8bp_to_ENST00000458437_5end | |association_with_transcript=-8bp_to_ENST00000458437_5end | ||
|cluster_id=chr7:125078119..125078156,+ | |||
|coexpression_cluster_id=C356 | |||
|description=CAGE_peak_2_at_ENST00000458437_5end | |description=CAGE_peak_2_at_ENST00000458437_5end | ||
|id=chr7:125078119..125078156,+ | |id=chr7:125078119..125078156,+ | ||
|ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0002586!5.93e-08!3;CL:0000075!3.02e-07!27 | |ontology_enrichment_celltype=CL:0000064!3.11e-27!3;CL:0005012!3.11e-27!3;CL:0000067!3.11e-27!3;CL:0002304!3.11e-27!3;CL:0002586!5.93e-08!3;CL:0000075!3.02e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:1000497;2.07e-24;17!CL:0002518;2.07e-24;17 | |||
|ontology_enrichment_celltype_v019_2=CL:1000497,2.07e-24,17;CL:0002518,2.07e-24,17 | |||
|ontology_enrichment_development_v019=UBERON:0003918;2.00e-40;10!UBERON:0007687;2.00e-40;10!UBERON:0003104;1.90e-14;31 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:7;1.53e-08;39 | |||
|ontology_enrichment_disease_v019_2=DOID:7,2.03e-11,39 | |||
|ontology_enrichment_uberon=UBERON:0007625!3.93e-29!11;UBERON:0001778!3.11e-27!3;UBERON:0001775!3.11e-27!3;UBERON:0000488!1.05e-20!4;UBERON:0000019!4.45e-17!19;UBERON:0000047!4.45e-17!19;UBERON:0004088!4.45e-17!19;UBERON:0003072!4.45e-17!19;UBERON:0003071!4.45e-17!19;UBERON:0004128!4.45e-17!19;UBERON:0000970!3.02e-16!20;UBERON:0002104!1.71e-15!21;UBERON:0001456!1.71e-15!21;UBERON:0000020!3.49e-14!23;UBERON:0002203!3.71e-14!6;UBERON:0001768!3.71e-14!6;UBERON:0001032!1.31e-13!24;UBERON:0004456!1.31e-13!24;UBERON:0001801!2.07e-13!14;UBERON:0002113!3.24e-12!27;UBERON:0003918!3.24e-12!27;UBERON:0005095!3.24e-12!27;UBERON:0007687!3.24e-12!27;UBERON:0005085!2.50e-11!29;UBERON:0000489!2.30e-10!32;UBERON:0005172!3.54e-09!55;UBERON:0005173!3.54e-09!55;UBERON:0002417!2.78e-08!61;UBERON:0000916!2.78e-08!61;UBERON:0002200!3.76e-08!11;UBERON:0006876!3.76e-08!11;UBERON:0001781!5.93e-08!3;UBERON:0001782!5.93e-08!3;UBERON:0005424!5.93e-08!3;UBERON:0002369!7.26e-08!3;UBERON:0001235!7.26e-08!3;UBERON:0006858!7.26e-08!3;UBERON:0006554!1.27e-07!44;UBERON:0001008!1.85e-07!45;UBERON:0001444!5.74e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002113;1.03e-17;24!UBERON:0011143;1.03e-17;24!UBERON:0000489;6.74e-15;29!UBERON:0006554;1.90e-14;30!UBERON:0001008;1.90e-14;30!UBERON:0002417;1.46e-07;58!UBERON:0000916;1.46e-07;58 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002113,1.86e-16,26;UBERON:0003918,1.86e-16,26;UBERON:0011143,1.86e-16,26;UBERON:0005095,1.86e-16,26;UBERON:0007687,1.86e-16,26;UBERON:0000489,5.04e-14,31;UBERON:0006554,1.08e-09,47;UBERON:0001008,1.62e-09,48;UBERON:0005172,1.34e-08,54;UBERON:0005173,1.34e-08,54;UBERON:0002417,7.34e-08,60;UBERON:0000916,7.34e-08,60;UBERON:0003103,4.47e-07,68 | |||
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|short_description=p2@ENST00000458437 | |short_description=p2@ENST00000458437 | ||
}} | }} |
Latest revision as of 05:39, 31 July 2015
Short description: | p2@ENST00000458437 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_ENST00000458437_5end |
Coexpression cluster: | C356_renal_Smooth_Chondrocyte_thyroid_serous_Small_mesenchymal |
Association with transcript: | -8bp_to_ENST00000458437_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
kidney cell | 2.07e-24 | 17 |
kidney epithelial cell | 2.07e-24 | 17 |
Ontology term | p-value | n |
---|---|---|
kidney | 1.86e-16 | 26 |
kidney mesenchyme | 1.86e-16 | 26 |
upper urinary tract | 1.86e-16 | 26 |
kidney rudiment | 1.86e-16 | 26 |
kidney field | 1.86e-16 | 26 |
cavitated compound organ | 5.04e-14 | 31 |
urinary system structure | 1.08e-09 | 47 |
renal system | 1.62e-09 | 48 |
abdomen element | 1.34e-08 | 54 |
abdominal segment element | 1.34e-08 | 54 |
abdominal segment of trunk | 7.34e-08 | 60 |
abdomen | 7.34e-08 | 60 |
compound organ | 4.47e-07 | 68 |
Ontology term | p-value | n |
---|---|---|
disease of anatomical entity | 2.03e-11 | 39 |