FFCP PHASE1:Hg19::chr7:107883582..107883593,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4897 | |EntrezGene=4897 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7994 | |HGNC=7994 | ||
|TSSclassifier=strong | |||
|UniProt=C9JH43 | |UniProt=C9JH43 | ||
|association_with_transcript=90bp_to_ENST00000417701_5end | |association_with_transcript=90bp_to_ENST00000417701_5end | ||
|cluster_id=chr7:107883582..107883593,- | |||
|coexpression_cluster_id=C445 | |||
|description=CAGE_peak_20_at_NRCAM_5end | |description=CAGE_peak_20_at_NRCAM_5end | ||
|id=chr7:107883582..107883593,- | |id=chr7:107883582..107883593,- | ||
|ontology_enrichment_celltype=CL:0000064!7.27e-16!3;CL:0005012!7.27e-16!3;CL:0000067!7.27e-16!3;CL:0002304!7.27e-16!3 | |ontology_enrichment_celltype=CL:0000064!7.27e-16!3;CL:0005012!7.27e-16!3;CL:0000067!7.27e-16!3;CL:0002304!7.27e-16!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;4.66e-66;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001778!7.27e-16!3;UBERON:0001775!7.27e-16!3;UBERON:0001896!9.09e-16!3;UBERON:0005290!9.09e-16!3;UBERON:0010096!9.09e-16!3;UBERON:0002298!5.48e-13!8;UBERON:0002079!1.11e-12!1;UBERON:0002146!1.25e-12!1;UBERON:0005623!1.25e-12!1;UBERON:0000998!1.40e-12!1;UBERON:0006868!1.40e-12!1;UBERON:0002336!1.57e-12!1;UBERON:0001018!1.57e-12!1;UBERON:0002473!1.57e-12!1;UBERON:0005340!1.57e-12!1;UBERON:0002316!1.57e-12!1;UBERON:0003544!1.57e-12!1;UBERON:0001020!1.57e-12!1;UBERON:0005970!1.57e-12!1;UBERON:0002437!1.57e-12!1;UBERON:0001882!1.96e-12!1;UBERON:0005403!1.96e-12!1;UBERON:0001874!3.08e-12!1;UBERON:0007023!3.67e-12!115;UBERON:0000488!3.86e-12!4;UBERON:0000369!6.03e-12!4;UBERON:0002435!6.03e-12!4;UBERON:0000204!6.03e-12!4;UBERON:0010082!6.03e-12!4;UBERON:0002308!1.57e-11!9;UBERON:0000125!1.57e-11!9;UBERON:0003075!1.99e-11!86;UBERON:0007284!1.99e-11!86;UBERON:0002346!7.26e-11!90;UBERON:0004733!7.66e-09!12;UBERON:0002028!7.66e-09!12;UBERON:0007277!7.66e-09!12;UBERON:0001049!1.03e-08!57;UBERON:0005068!1.03e-08!57;UBERON:0006241!1.03e-08!57;UBERON:0007135!1.03e-08!57;UBERON:0002616!2.11e-08!59;UBERON:0002203!2.17e-08!6;UBERON:0001768!2.17e-08!6;UBERON:0004732!3.35e-08!13;UBERON:0009663!3.35e-07!7;UBERON:0003076!3.58e-07!15;UBERON:0003057!3.58e-07!15;UBERON:0000955!5.38e-07!69;UBERON:0006238!5.38e-07!69;UBERON:0002081!5.73e-07!2;UBERON:0005162!6.80e-07!2;UBERON:0000122!6.80e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0001896;3.27e-23;3!UBERON:0005290;3.27e-23;3!UBERON:0002298;2.45e-12;6!UBERON:0001894;9.89e-11;7!UBERON:0004733;7.92e-07;12!UBERON:0002028;7.92e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001896,3.27e-23,3;UBERON:0005290,3.27e-23,3;UBERON:0010096,3.27e-23,3;UBERON:0002298,2.45e-12,6;UBERON:0001894,9.89e-11,7;UBERON:0006222,9.89e-11,7;UBERON:0004733,7.92e-07,12;UBERON:0002028,7.92e-07,12;UBERON:0007277,7.92e-07,12 | |||
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|short_description=p20@NRCAM | |short_description=p20@NRCAM | ||
}} | }} |
Latest revision as of 02:33, 25 September 2015
Short description: | p20@NRCAM |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_20_at_NRCAM_5end |
Coexpression cluster: | C445_lung_Lens_Ciliary_diencephalon_thalamus_bile_hepatoma |
Association with transcript: | 90bp_to_ENST00000417701_5end |
EntrezGene: | NRCAM |
HGNC: | 7994 |
UniProt: | C9JH43 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
medulla oblongata | 3.27e-23 | 3 |
myelencephalon | 3.27e-23 | 3 |
future myelencephalon | 3.27e-23 | 3 |
brainstem | 2.45e-12 | 6 |
diencephalon | 9.89e-11 | 7 |
future diencephalon | 9.89e-11 | 7 |
segmental subdivision of hindbrain | 7.92e-07 | 12 |
hindbrain | 7.92e-07 | 12 |
presumptive hindbrain | 7.92e-07 | 12 |