FFCP PHASE1:Hg19::chr13:45775162..45775191,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr13:45775162..45775191,-
|short_description=p2@KCTD4
|description=CAGE_peak_2_at_KCTD4_5end
|association_with_transcript=0bp_to_ENST00000405872,NM_198404,uc00...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=386618 | |EntrezGene=386618 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=23227 | |HGNC=23227 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WVF5 | |UniProt=Q8WVF5 | ||
|association_with_transcript=0bp_to_ENST00000405872,NM_198404,uc001uzx.3_5end | |||
|cluster_id=chr13:45775162..45775191,- | |||
|description=CAGE_peak_2_at_KCTD4_5end | |||
|id=chr13:45775162..45775191,- | |||
|ontology_enrichment_celltype=CL:0000359!3.15e-20!32;CL:0000055!2.43e-15!180;CL:0000192!1.63e-13!42;CL:0000514!1.63e-13!42;CL:0000057!5.39e-11!75;CL:0002620!1.41e-10!23;CL:0000144!3.26e-10!625;CL:0000680!7.73e-10!57;CL:0000056!7.73e-10!57;CL:0000355!7.73e-10!57;CL:0002539!4.96e-09!10;CL:0000187!6.75e-09!54;CL:0000548!1.78e-08!679;CL:0000004!1.78e-08!679;CL:0000255!1.78e-08!679;CL:0000220!1.91e-08!246;CL:0002371!2.47e-08!591;CL:0000012!2.87e-08!682;CL:0002321!3.06e-08!248;CL:0000183!1.42e-07!59;CL:0000222!1.44e-07!119;CL:0000393!2.43e-07!60;CL:0000211!2.43e-07!60;CL:0002559!3.33e-07!4 | |||
|ontology_enrichment_celltype_v019=CL:0000359;6.43e-20;32!CL:0002539;3.44e-11;10!CL:0002559;9.60e-11;5!CL:0000192;1.12e-10;43!CL:0000346;1.16e-10;3!CL:1000428;1.16e-10;3!CL:0002595;2.36e-10;5!CL:0002621;3.60e-10;3!CL:0002594;9.28e-08;4!CL:0002593;4.36e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000359,3.83e-21,32;CL:0000192,1.08e-14,43;CL:0000514,1.08e-14,43;CL:0002321,3.77e-12,250;CL:0000680,2.52e-11,58;CL:0000056,2.52e-11,58;CL:0000355,2.52e-11,58;CL:0002539,3.27e-11,10;CL:0002559,7.06e-11,5;CL:0000346,9.45e-11,3;CL:1000428,9.45e-11,3;CL:0000187,1.24e-10,55;CL:0002595,1.95e-10,5;CL:0002621,3.56e-10,3;CL:0000222,1.27e-09,121;CL:0000393,3.25e-09,61;CL:0000211,3.25e-09,61;CL:0002594,8.99e-08,4;CL:0002593,3.74e-07,2 | |||
|ontology_enrichment_development_v019=CL:0000514;1.12e-10;43 | |||
|ontology_enrichment_disease=DOID:2394!9.96e-08!14 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000486!2.96e-16!82;UBERON:0000914!9.10e-15!83;UBERON:0002329!9.10e-15!83;UBERON:0003077!9.10e-15!83;UBERON:0003059!9.10e-15!83;UBERON:0007282!9.10e-15!83;UBERON:0009618!9.10e-15!83;UBERON:0007285!9.10e-15!83;UBERON:0004290!1.07e-13!70;UBERON:0002097!2.02e-13!40;UBERON:0002199!3.65e-13!45;UBERON:0002416!3.65e-13!45;UBERON:0001637!1.27e-12!42;UBERON:0003509!1.27e-12!42;UBERON:0004572!1.27e-12!42;UBERON:0004573!1.44e-11!33;UBERON:0004571!1.44e-11!33;UBERON:0001981!4.25e-09!60;UBERON:0007500!4.25e-09!60;UBERON:0004537!4.25e-09!60;UBERON:0006965!4.25e-09!60;UBERON:0004237!4.96e-09!10;UBERON:0004695!4.96e-09!10;UBERON:0002111!4.96e-09!10;UBERON:0004178!4.96e-09!10;UBERON:0004872!6.01e-09!84;UBERON:0003102!9.05e-09!95;UBERON:0001134!1.05e-08!61;UBERON:0002036!1.05e-08!61;UBERON:0003082!1.05e-08!61;UBERON:0002067!1.09e-08!9;UBERON:0004016!1.09e-08!9;UBERON:0010083!1.09e-08!9;UBERON:0005256!1.45e-08!143;UBERON:0002385!3.37e-08!63;UBERON:0001015!3.37e-08!63;UBERON:0000383!3.37e-08!63;UBERON:0000055!1.22e-07!69;UBERON:0002073!3.33e-07!4;UBERON:0005086!3.33e-07!4;UBERON:0002049!5.56e-07!79;UBERON:0007798!5.56e-07!79 | |||
|ontology_enrichment_uberon_v019=UBERON:0004573;8.95e-14;33!UBERON:0004571;8.95e-14;33!UBERON:0001637;1.08e-12;42!UBERON:0003509;1.08e-12;42!UBERON:0004572;1.08e-12;42!UBERON:0004237;3.44e-11;10!UBERON:0004695;3.44e-11;10!UBERON:0002111;3.44e-11;10!UBERON:0004178;3.44e-11;10!UBERON:0002073;9.60e-11;5!UBERON:0000412;1.16e-10;3!UBERON:0001992;1.16e-10;3!UBERON:0002097;2.03e-10;41!UBERON:0003834;2.36e-10;5!UBERON:0001533;2.36e-10;5!UBERON:0001949;3.60e-10;3!UBERON:0001310;9.28e-08;4!UBERON:0003513;2.17e-07;7!UBERON:0001135;3.34e-07;15!UBERON:0002456;4.36e-07;2!UBERON:0001003;6.40e-07;15!UBERON:0007376;6.40e-07;15 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,2.77e-17,42;UBERON:0003509,2.77e-17,42;UBERON:0004572,2.77e-17,42;UBERON:0000486,1.49e-15,83;UBERON:0004573,3.04e-15,33;UBERON:0004571,3.04e-15,33;UBERON:0002329,1.32e-12,71;UBERON:0003059,1.32e-12,71;UBERON:0007282,1.32e-12,71;UBERON:0004290,1.32e-12,71;UBERON:0009618,1.32e-12,71;UBERON:0003077,2.33e-12,72;UBERON:0007285,2.33e-12,72;UBERON:0007524,4.03e-12,73;UBERON:0004237,3.27e-11,10;UBERON:0004695,3.27e-11,10;UBERON:0002111,3.27e-11,10;UBERON:0004178,3.27e-11,10;UBERON:0007500,4.44e-11,59;UBERON:0001981,4.44e-11,59;UBERON:0004537,4.44e-11,59;UBERON:0006965,4.44e-11,59;UBERON:0007503,5.02e-11,78;UBERON:0002097,5.14e-11,41;UBERON:0002073,7.06e-11,5;UBERON:0005086,7.06e-11,5;UBERON:0000412,9.45e-11,3;UBERON:0001992,9.45e-11,3;UBERON:0003834,1.95e-10,5;UBERON:0001533,1.95e-10,5;UBERON:0001134,2.50e-10,62;UBERON:0002036,2.50e-10,62;UBERON:0003082,2.50e-10,62;UBERON:0001949,3.56e-10,3;UBERON:0002385,7.03e-10,64;UBERON:0001015,7.03e-10,64;UBERON:0000383,7.03e-10,64;UBERON:0004872,9.46e-10,83;UBERON:0002199,1.78e-09,46;UBERON:0002416,1.78e-09,46;UBERON:0003102,3.72e-09,99;UBERON:0000055,4.47e-09,68;UBERON:0001310,8.99e-08,4;UBERON:0005256,1.03e-07,122;UBERON:0003513,1.90e-07,7;UBERON:0002049,2.06e-07,78;UBERON:0007798,2.06e-07,78;UBERON:0001135,3.24e-07,15;UBERON:0002456,3.74e-07,2;UBERON:0001003,5.51e-07,15;UBERON:0007376,5.51e-07,15;UBERON:0007383,5.51e-07,15;UBERON:0004871,9.92e-07,8 | |||
|phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39557661096953,9.04041792035965,12.4152715365853,8.78279037822912,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,2.51577443545116,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0.597794722207204,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0,0,1.6623846929051,0,0,0.300476117813194,0,1.07633781413317,1.92201649936711,0.635795703478686,0,0.92747276314595,1.03056216018252,1.30281799432113,0,0.292311015483596,0,1.01254888506529,0,0.710019185033229,1.81353776809752,0.169560592310488,2.51239109112286,3.81844568827169,2.29443676311203,0,0,0,0,0,0,9.38697193978896,5.78916844373597,2.76269842704961,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,1.75600456653801,0,0,0.277765335475589,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,5.71139235876122,2.55195175036296,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.616964956219941,0,0,0,0,0,2.32689088364,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,2.17171960001369,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.24900292158013,1.10391690523754,1.99140405487612,0.300946099727719,0,0,0,0,1.47702144595741,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,1.80455823272956,0,0,0,0,0,0.847168708148562,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.62962469366128,1.3940745403212,0,1.59691809095107,0.869932992075073,1.29726953372744,0.858749320451947,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,1.26377536871694,0,1.70599442741899,3.16950440270266,0,0,0,0,3.98063385144732,3.5076070820301,0,0,5.47858017799301,1.54911749049875,0.281695602532241,0.430234056612155,0.294747123039363,4.9933947207375,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,11.5816225524729,10.4434638713739,0,0,0.779160935160341,0,0,0,0,0,0.20453736500431,0,5.28767299025073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.27600463892768,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0.457680136793847,0,0,0.73927574994817,0.63718706865481,4.94783423379965,0.155262956876259,0,0.53168342911599,2.08698024724694,0.150257608997218,0.380805212168795,0,2.18218391043071,0,0.928067519756987,1.59238355479446,0,0,0,3.78554694685953,0,3.21662387062389,3.13193150358254,0,0,0,0.358177682162975,2.16161013012681,0,0.176689145945881,0.964570191354574,8.44712203265363,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,1.38251932362818,0,4.37828402703092,5.87972492838188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | |phase1_expression=0.363356758541113,0.428201047781966,0,0,0,0,0,0,0,0,0,0,0,0,0,7.39557661096953,9.04041792035965,12.4152715365853,8.78279037822912,0,0,0,0,0,0.125542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.224723484445085,0,0,0,0,0,0,0,0,0,0.251248665256743,0.521482918420201,0,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174129737299267,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0.759783069987479,2.51577443545116,0,0,0,1.06748995729705,0.24666754841716,0,0,0,0,0,0,0.624320153660641,0.570471821544449,0.597794722207204,0.117434498643765,0,0.280901613404497,0.204154171254893,0.368502951935304,0.103325781175765,0,0,0,0,0,0,1.6623846929051,0,0,0.300476117813194,0,1.07633781413317,1.92201649936711,0.635795703478686,0,0.92747276314595,1.03056216018252,1.30281799432113,0,0.292311015483596,0,1.01254888506529,0,0.710019185033229,1.81353776809752,0.169560592310488,2.51239109112286,3.81844568827169,2.29443676311203,0,0,0,0,0,0,9.38697193978896,5.78916844373597,2.76269842704961,2.78620756819187,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.343135620597051,1.75600456653801,0,0,0.277765335475589,0,0,0,0,0,0.288732895522148,0,0,0,0,0,0,0,0.93733833986777,5.71139235876122,2.55195175036296,0,0.290633938513962,0,0,0,0,0,0,0,0,0,0,0.616964956219941,0,0,0,0,0,2.32689088364,0,0,0.26593811658487,0,0,0,0,0.142977993658148,0,0,0.325736184293735,0,0,0,1.74306691720059,0.099972991182057,0,0,0,0,0,0,2.17171960001369,0,0.179060963239896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.207970861530807,1.24900292158013,1.10391690523754,1.99140405487612,0.300946099727719,0,0,0,0,1.47702144595741,0,0,0,0,0,0.303127571446259,0,0,0.248107807818777,0.153461973288062,0.280660094433074,0.256278298511402,0,0,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,1.80455823272956,0,0,0,0,0,0.847168708148562,0,0,0.105551628892876,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,1.14853107599234,0,1.6068392984416,0,0,0,0,0,0,0,0,0.165284915360978,0,0,0,0,0.62962469366128,1.3940745403212,0,1.59691809095107,0.869932992075073,1.29726953372744,0.858749320451947,0,0,0.38126038784765,0,0,0,0,0,0,0,0.404364963146632,1.58510321173008,1.26377536871694,0,1.70599442741899,3.16950440270266,0,0,0,0,3.98063385144732,3.5076070820301,0,0,5.47858017799301,1.54911749049875,0.281695602532241,0.430234056612155,0.294747123039363,4.9933947207375,0,0,0,0,0,0.192444225451024,0.670302275535787,0,0.376575203107117,0.43050537267123,0,0.443430153536676,2.52695740227655,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.58116727106535,11.5816225524729,10.4434638713739,0,0,0.779160935160341,0,0,0,0,0,0.20453736500431,0,5.28767299025073,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113942055847001,0,0,0,1.27600463892768,0.641183153813036,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.174118413160805,0,0.171986032471617,0,0,0,0,0,0,0.137041924646751,1.19228767021794,0,0,0.480952921509202,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0,0,1.71906176567983,0,0,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.5926644736038,0.979762080328227,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.189403005275089,0.754703705257725,0,0.457680136793847,0,0,0.73927574994817,0.63718706865481,4.94783423379965,0.155262956876259,0,0.53168342911599,2.08698024724694,0.150257608997218,0.380805212168795,0,2.18218391043071,0,0.928067519756987,1.59238355479446,0,0,0,3.78554694685953,0,3.21662387062389,3.13193150358254,0,0,0,0.358177682162975,2.16161013012681,0,0.176689145945881,0.964570191354574,8.44712203265363,0,0.345430341731199,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.40341013740704,0,0,0.327543835020193,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.50794029276486,0,0,0,0,0,0,0,0,0,0,0.215927591218621,0,0,0,0,0,0,0,0,1.38251932362818,0,4.37828402703092,5.87972492838188,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.432626562123789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.122241444182866,0,0,0,0 | ||
|short_description=p2@KCTD4 | |||
}} | }} |
Latest revision as of 11:51, 17 September 2015
Short description: | p2@KCTD4 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_KCTD4_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000405872, NM_198404, uc001uzx.3_5end |
EntrezGene: | KCTD4 |
HGNC: | 23227 |
UniProt: | Q8WVF5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
vascular associated smooth muscle cell | 3.83e-21 | 32 |
smooth muscle cell | 1.08e-14 | 43 |
smooth muscle myoblast | 1.08e-14 | 43 |
embryonic cell | 3.77e-12 | 250 |
muscle precursor cell | 2.52e-11 | 58 |
myoblast | 2.52e-11 | 58 |
multi-potent skeletal muscle stem cell | 2.52e-11 | 58 |
aortic smooth muscle cell | 3.27e-11 | 10 |
hair follicle cell | 7.06e-11 | 5 |
hair follicle dermal papilla cell | 9.45e-11 | 3 |
stem cell of epidermis | 9.45e-11 | 3 |
muscle cell | 1.24e-10 | 55 |
smooth muscle cell of the subclavian artery | 1.95e-10 | 5 |
gingival epithelial cell | 3.56e-10 | 3 |
mesodermal cell | 1.27e-09 | 121 |
electrically responsive cell | 3.25e-09 | 61 |
electrically active cell | 3.25e-09 | 61 |
smooth muscle cell of the umbilical artery | 8.99e-08 | 4 |
smooth muscle cell of the internal thoracic artery | 3.74e-07 | 2 |