FFCP PHASE1:Hg19::chr6:90192974..90192999,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(8 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=22881 | |EntrezGene=22881 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=17280 | |HGNC=17280 | ||
|TSSclassifier=strong | |||
|UniProt=E5RJR9 | |UniProt=E5RJR9 | ||
|association_with_transcript=-122bp_to_ENST00000520458_5end | |association_with_transcript=-122bp_to_ENST00000520458_5end | ||
|cluster_id=chr6:90192974..90192999,+ | |||
|description=CAGE_peak_6_at_ANKRD6_5end | |description=CAGE_peak_6_at_ANKRD6_5end | ||
|id=chr6:90192974..90192999,+ | |id=chr6:90192974..90192999,+ | ||
|ontology_enrichment_celltype=CL:0002334!2.72e-09!12;CL:0002615!2.05e-08!3;CL:0002579!2.65e-08!3;CL:0000057!4.30e-08!75;CL:0002580!4.62e-08!3;CL:0002541!9.54e-08!3;CL:0000136!4.55e-07!15 | |ontology_enrichment_celltype=CL:0002334!2.72e-09!12;CL:0002615!2.05e-08!3;CL:0002579!2.65e-08!3;CL:0000057!4.30e-08!75;CL:0002580!4.62e-08!3;CL:0002541!9.54e-08!3;CL:0000136!4.55e-07!15 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.44e-24;12!CL:0002615;5.75e-20;3!CL:0002579;1.34e-19;3!CL:0002580;7.82e-19;3!CL:0000136;4.69e-17;13!CL:0002617;3.38e-13;2!CL:0002541;7.29e-09;3!CL:0000039;1.78e-08;7!CL:0000586;1.78e-08;7!CL:0002616;6.58e-08;1!CL:0002581;8.81e-08;1!CL:0000222;1.56e-07;1!CL:0002563;3.79e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,1.09e-24,12;CL:0002615,6.14e-20,3;CL:0002579,1.23e-19,3;CL:0002580,5.43e-19,3;CL:0000136,9.98e-15,15;CL:0002617,2.81e-13,2;CL:0002541,7.30e-09,3;CL:0000039,1.74e-08,7;CL:0000586,1.74e-08,7;CL:0002616,6.59e-08,1;CL:0002581,8.54e-08,1;CL:0002563,3.63e-07,4 | |||
|ontology_enrichment_development_v019=UBERON:0010226;2.91e-07;1!UBERON:0005062;7.48e-07;4!UBERON:0007284;7.48e-07;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:1799;2.91e-07;1!DOID:10165;2.91e-07;1!DOID:178;2.91e-07;1!DOID:326;2.91e-07;1!DOID:3978;2.91e-07;1!DOID:3394;2.91e-07;1!DOID:5844;2.91e-07;1!DOID:1798;2.91e-07;1!DOID:2513;2.91e-07;1!DOID:3369;2.91e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:2513,1.72e-07,1;DOID:3369,2.35e-07,1;DOID:1799,3.62e-07,1;DOID:10165,3.62e-07,1;DOID:1798,3.62e-07,1;DOID:178,3.84e-07,1;DOID:326,3.84e-07,1;DOID:3978,3.84e-07,1;DOID:3394,3.84e-07,1;DOID:5844,3.84e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0003688!4.90e-15!6;UBERON:0002358!4.90e-15!6;UBERON:0003684!4.90e-15!6;UBERON:0001178!4.90e-15!6;UBERON:0004923!1.36e-09!57;UBERON:0007100!7.99e-09!27;UBERON:0000476!9.54e-08!3;UBERON:0000920!9.54e-08!3;UBERON:0004457!5.19e-07!12;UBERON:0000042!5.19e-07!12;UBERON:0000948!5.46e-07!24;UBERON:0005498!5.46e-07!24;UBERON:0004140!5.46e-07!24;UBERON:0009881!5.46e-07!24;UBERON:0004141!5.46e-07!24;UBERON:0003084!5.46e-07!24;UBERON:0007005!5.46e-07!24;UBERON:0004139!5.46e-07!24;UBERON:0004291!5.46e-07!24 | |||
|ontology_enrichment_uberon_v019=UBERON:0003688;9.24e-38;6!UBERON:0002358;9.24e-38;6!UBERON:0003684;9.24e-38;6!UBERON:0001178;9.24e-38;6!UBERON:0004457;5.11e-25;9!UBERON:0000042;5.11e-25;9!UBERON:0000310;4.66e-15;10!UBERON:0005406;5.32e-14;2!UBERON:0001443;1.13e-13;11!UBERON:0003978;7.29e-09;3!UBERON:0000946;7.29e-09;3!UBERON:0003124;7.29e-09;3!UBERON:0000920;7.29e-09;3!UBERON:0002084;2.91e-07;1!UBERON:0002135;2.91e-07;1!UBERON:0002146;2.91e-07;1!UBERON:0002082;2.91e-07;1!UBERON:0005623;2.91e-07;1!UBERON:0001242;3.79e-07;4!UBERON:0001262;3.79e-07;4!UBERON:0004786;3.79e-07;4!UBERON:0004808;3.79e-07;4!UBERON:0001277;3.79e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003688,9.01e-38,6;UBERON:0002358,9.01e-38,6;UBERON:0003684,9.01e-38,6;UBERON:0001178,9.01e-38,6;UBERON:0004457,1.22e-18,12;UBERON:0000042,1.22e-18,12;UBERON:0000310,3.57e-15,10;UBERON:0005406,5.17e-14,2;UBERON:0001443,8.89e-14,11;UBERON:0004923,3.69e-11,66;UBERON:0000920,7.30e-09,3;UBERON:0003978,7.60e-09,3;UBERON:0009751,7.60e-09,3;UBERON:0000946,7.60e-09,3;UBERON:0002523,7.60e-09,3;UBERON:0005983,7.60e-09,3;UBERON:0002165,7.60e-09,3;UBERON:0002062,7.60e-09,3;UBERON:0007280,7.60e-09,3;UBERON:0002146,2.07e-07,1;UBERON:0005623,2.07e-07,1;UBERON:0002084,3.40e-07,1;UBERON:0002082,3.40e-07,1;UBERON:0010226,3.40e-07,1;UBERON:0001242,3.63e-07,4;UBERON:0001262,3.63e-07,4;UBERON:0004786,3.63e-07,4;UBERON:0004808,3.63e-07,4;UBERON:0001277,3.63e-07,4;UBERON:0002135,4.34e-07,1 | |||
|phase1_expression=3.08853244759946,1.49870366723688,4.36958652697511,6.00439790118782,7.15137751083661,11.3404008133048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.36321382093172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,4.60385919864187,1.40330047216537,3.84417447767103,5.62877973973374,3.53878626515936,5.93672265779964,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.796991953004279,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,4.6112780877612,2.42345639906385,1.4124158349861,0.957003479195758,1.74035427463538,1.06606955203727,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.11712960508902,1.60412296808179,0,1.19807400299395,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,1.30953347240711,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,3.17021971490014,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=3.08853244759946,1.49870366723688,4.36958652697511,6.00439790118782,7.15137751083661,11.3404008133048,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35426486594342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.253019692019503,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00267582127178,0.144846518960824,0,0,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,0.506522046658319,0.264818361626438,0.286836620748814,0,0.560677600142307,0,0.24666754841716,0,0,0,0,0,0,0,0,0.149448680551801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.113432183160021,0.179389635688862,0,0,0,0,0,0,0,0.0974370051611986,0,0,0.484938170456436,0.355009592516614,0.10075209822764,0.169560592310488,0,0,0,0,0.132529768321485,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,8.36321382093172,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0.479249710983165,1.14861935834114,0,0,0,0,0,0,0,0,0.254094624222463,0,0,0,0,0,0,0,0,0,0,0.831883446123229,0.892144943985809,0,0.234282829985426,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.73675465473144,4.60385919864187,1.40330047216537,3.84417447767103,5.62877973973374,3.53878626515936,5.93672265779964,0,0,0,0,0,1.45031339509947,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.62962469366128,0,0,0.532306030317022,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0.136499911407986,0,0,0,0,0.438450885253763,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0962221127255121,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.890894042497916,0,0,0,0,0,0,0.796991953004279,0,0,0,0,1.86623752597084,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.344743373241465,0,0,0,0,0,0,0,0.219385397153973,0,0,0,0,4.6112780877612,2.42345639906385,1.4124158349861,0.957003479195758,1.74035427463538,1.06606955203727,0,0,0,0,0,0,0,0,0,0,1.41353071433941,0,0,0,0,0,0,0,0,0,0.234264445725339,0,0,0,0,0,0,0,0.150323419414493,0,0,0,0,0,0,0,0,0,0,0.17472666824203,0,0,0,0,0,0,0,0,0,0,0.195551382734803,0,0.213452994739353,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.429765441419957,0,1.11712960508902,1.60412296808179,0,1.19807400299395,0,0.223171457441873,0.268733889946905,0.360299883542404,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0.0524545881349981,0,0,0,0.714695326373367,1.32418394073086,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.310874401165561,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.336749488765919,2.52369796457302,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.567515953566836,0,0,0,0,0,0,0,0,0,0,0,0.636008701306837,0,0,0,0,0.0642292250964595,0,0.159633859057151,0,0,0,0,0,0,0,0,0,0,0,0,0.225630985047772,0,0,1.30953347240711,0,0,0,0,0,0,0.546974809018219,0,0.496211178389294,0,0,0,0,0,0,0.0887023701626388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.485710993059139,0,0,0,0,0,3.17021971490014,0,0,0,0.245148321753905,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.126698501011437,0,0,0,0,0.0757786982182394,0,0,0,0,0,0,0,0,0.0636471582781649,0,0.217716747896961,0,0,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p6@ANKRD6 | |short_description=p6@ANKRD6 | ||
}} | }} |
Latest revision as of 03:37, 20 September 2015
Short description: | p6@ANKRD6 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_ANKRD6_5end |
Coexpression cluster: | NA |
Association with transcript: | -122bp_to_ENST00000520458_5end |
EntrezGene: | ANKRD6 |
HGNC: | 17280 |
UniProt: | E5RJR9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 1.09e-24 | 12 |
adipocyte of omentum tissue | 6.14e-20 | 3 |
omentum preadipocyte | 1.23e-19 | 3 |
preadipocyte of the breast | 5.43e-19 | 3 |
fat cell | 9.98e-15 | 15 |
adipocyte of breast | 2.81e-13 | 2 |
chorionic membrane mesenchymal stem cell | 7.30e-09 | 3 |
germ line cell | 1.74e-08 | 7 |
germ cell | 1.74e-08 | 7 |
perirenal adipocyte cell | 6.59e-08 | 1 |
perirenal preadipocyte | 8.54e-08 | 1 |
intestinal epithelial cell | 3.63e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
omentum | 9.01e-38 | 6 |
peritoneum | 9.01e-38 | 6 |
abdominal cavity | 9.01e-38 | 6 |
visceral peritoneum | 9.01e-38 | 6 |
cavity lining | 1.22e-18 | 12 |
serous membrane | 1.22e-18 | 12 |
breast | 3.57e-15 | 10 |
perirenal fat | 5.17e-14 | 2 |
chest | 8.89e-14 | 11 |
organ component layer | 3.69e-11 | 66 |
egg chorion | 7.30e-09 | 3 |
valve | 7.60e-09 | 3 |
cardiac mesenchyme | 7.60e-09 | 3 |
cardial valve | 7.60e-09 | 3 |
tunica intima | 7.60e-09 | 3 |
heart layer | 7.60e-09 | 3 |
endocardium | 7.60e-09 | 3 |
endocardial cushion | 7.60e-09 | 3 |
presumptive endocardium | 7.60e-09 | 3 |
pulmonary valve | 2.07e-07 | 1 |
semi-lunar valve | 2.07e-07 | 1 |
heart left ventricle | 3.40e-07 | 1 |
cardiac ventricle | 3.40e-07 | 1 |
future cardiac ventricle | 3.40e-07 | 1 |
intestinal mucosa | 3.63e-07 | 4 |
wall of intestine | 3.63e-07 | 4 |
gastrointestinal system mucosa | 3.63e-07 | 4 |
gastrointestinal system epithelium | 3.63e-07 | 4 |
intestinal epithelium | 3.63e-07 | 4 |
mitral valve | 4.34e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
basal cell carcinoma | 1.72e-07 | 1 |
peripheral primitive neuroectodermal tumor | 2.35e-07 | 1 |
islet cell tumor | 3.62e-07 | 1 |
endocrine pancreas cancer | 3.62e-07 | 1 |
pancreatic endocrine carcinoma | 3.62e-07 | 1 |
vascular disease | 3.84e-07 | 1 |
ischemia | 3.84e-07 | 1 |
extrinsic cardiomyopathy | 3.84e-07 | 1 |
myocardial ischemia | 3.84e-07 | 1 |
myocardial infarction | 3.84e-07 | 1 |