FFCP PHASE1:Hg19::chr21:27284505..27284518,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr21:27284505..27284518,- | |||
|coexpression_cluster_id=C2629 | |||
|description=CAGE_peak_at_chr21:27284505..27284518,- | |description=CAGE_peak_at_chr21:27284505..27284518,- | ||
|id=chr21:27284505..27284518,- | |id=chr21:27284505..27284518,- | ||
|ontology_enrichment_celltype=CL:0002139!3.11e-21!24;CL:0000115!6.67e-16!35;CL:0002543!1.86e-14!6;CL:0000071!7.68e-14!18;CL:0002546!7.68e-14!18;CL:0002078!5.95e-12!44;CL:0002618!1.32e-11!3;CL:0005020!2.10e-09!6;CL:0002138!2.10e-09!6;CL:0005022!2.10e-09!6;CL:0000213!1.76e-08!57;CL:0000215!1.76e-08!57 | |ontology_enrichment_celltype=CL:0002139!3.11e-21!24;CL:0000115!6.67e-16!35;CL:0002543!1.86e-14!6;CL:0000071!7.68e-14!18;CL:0002546!7.68e-14!18;CL:0002078!5.95e-12!44;CL:0002618!1.32e-11!3;CL:0005020!2.10e-09!6;CL:0002138!2.10e-09!6;CL:0005022!2.10e-09!6;CL:0000213!1.76e-08!57;CL:0000215!1.76e-08!57 | ||
|ontology_enrichment_celltype_v019=CL:0002618;1.43e-65;3!CL:0002543;2.86e-33;6!CL:0002139;5.54e-33;24!CL:0000785;4.10e-23;1!CL:0000819;4.10e-23;1!CL:0000071;6.36e-20;18!CL:0000115;9.47e-18;36!CL:0002138;7.79e-16;6!CL:0002545;1.48e-12;2!CL:0002078;7.90e-11;45!CL:0000213;1.06e-10;58!CL:0000215;1.06e-10;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0002618,7.35e-66,3;CL:0002543,2.05e-33,6;CL:0002139,4.69e-33,24;CL:0000819,6.40e-23,1;CL:0000115,4.24e-22,36;CL:0000071,5.49e-20,18;CL:0002546,5.49e-20,18;CL:0002078,1.05e-17,45;CL:0005020,7.79e-16,6;CL:0002138,7.79e-16,6;CL:0005022,7.79e-16,6;CL:0000213,9.48e-14,58;CL:0000215,9.48e-14,58;CL:0002545,1.48e-12,2;CL:0000785,3.62e-12,2;CL:0000955,3.62e-12,2;CL:0000818,3.62e-12,2;CL:0000954,3.62e-12,2;CL:0000816,3.62e-12,2;CL:0000817,1.51e-08,3 | |||
|ontology_enrichment_development_v019=CL:0002546;6.36e-20;18!CL:0005022;7.79e-16;6!CL:0000954;2.90e-12;2 | |||
|ontology_enrichment_disease=DOID:3493!6.59e-07!2 | |ontology_enrichment_disease=DOID:3493!6.59e-07!2 | ||
|ontology_enrichment_disease_v019=DOID:0060073;4.10e-23;1!DOID:8675;4.10e-23;1!DOID:0060058;8.84e-10;10 | |||
|ontology_enrichment_disease_v019_2=DOID:0060073,6.40e-23,1;DOID:8675,6.40e-23,1;DOID:0060058,9.65e-10,10 | |||
|ontology_enrichment_uberon=UBERON:0001049!8.92e-40!57;UBERON:0005068!8.92e-40!57;UBERON:0006241!8.92e-40!57;UBERON:0007135!8.92e-40!57;UBERON:0002616!2.35e-35!59;UBERON:0002780!4.74e-35!41;UBERON:0001890!4.74e-35!41;UBERON:0006240!4.74e-35!41;UBERON:0003080!4.31e-34!42;UBERON:0001017!7.92e-34!82;UBERON:0000955!9.47e-34!69;UBERON:0006238!9.47e-34!69;UBERON:0001893!2.82e-32!34;UBERON:0002020!3.31e-32!34;UBERON:0003528!3.31e-32!34;UBERON:0005743!6.78e-32!86;UBERON:0002791!5.51e-30!33;UBERON:0007023!4.13e-29!115;UBERON:0000073!3.91e-28!94;UBERON:0001016!3.91e-28!94;UBERON:0003075!7.38e-28!86;UBERON:0007284!7.38e-28!86;UBERON:0001869!2.76e-27!32;UBERON:0002346!2.82e-26!90;UBERON:0002308!5.19e-23!9;UBERON:0000125!5.19e-23!9;UBERON:0003056!9.00e-22!61;UBERON:0000025!1.54e-19!194;UBERON:0004111!4.00e-19!241;UBERON:0002619!2.44e-17!22;UBERON:0009663!3.56e-17!7;UBERON:0000033!4.45e-17!123;UBERON:0000477!3.27e-16!286;UBERON:0001950!4.22e-16!20;UBERON:0000153!6.15e-16!129;UBERON:0007811!6.15e-16!129;UBERON:0000956!4.98e-15!25;UBERON:0000203!4.98e-15!25;UBERON:0001986!7.68e-14!18;UBERON:0004638!7.68e-14!18;UBERON:0004852!7.68e-14!18;UBERON:0002420!3.41e-13!9;UBERON:0007245!3.41e-13!9;UBERON:0010009!3.41e-13!9;UBERON:0010011!3.41e-13!9;UBERON:0000454!3.41e-13!9;UBERON:0000200!8.26e-13!6;UBERON:0004121!3.11e-12!169;UBERON:0000924!8.94e-12!173;UBERON:0006601!8.94e-12!173;UBERON:0000487!5.37e-11!22;UBERON:0006331!7.92e-11!3;UBERON:0000483!1.08e-10!309;UBERON:0000988!1.26e-10!3;UBERON:0000119!1.72e-10!312;UBERON:0002298!2.10e-10!8;UBERON:0002771!7.58e-10!3;UBERON:0001638!1.66e-09!9;UBERON:0003920!1.66e-09!9;UBERON:0004582!1.66e-09!9;UBERON:0001871!1.80e-09!7;UBERON:0006914!1.83e-09!25;UBERON:0000369!3.84e-08!4;UBERON:0002435!3.84e-08!4;UBERON:0000204!3.84e-08!4;UBERON:0010082!3.84e-08!4;UBERON:0001875!5.93e-08!2;UBERON:0006514!5.93e-08!2;UBERON:0002148!1.28e-07!2;UBERON:0009662!1.28e-07!2;UBERON:0000055!1.68e-07!69;UBERON:0001897!2.16e-07!2;UBERON:0003076!2.55e-07!15;UBERON:0003057!2.55e-07!15;UBERON:0002360!3.51e-07!2;UBERON:0000094!3.51e-07!2;UBERON:0007645!3.51e-07!2;UBERON:0002066!4.29e-07!5;UBERON:0001473!4.83e-07!8;UBERON:0004536!4.83e-07!8;UBERON:0006558!4.83e-07!8 | |ontology_enrichment_uberon=UBERON:0001049!8.92e-40!57;UBERON:0005068!8.92e-40!57;UBERON:0006241!8.92e-40!57;UBERON:0007135!8.92e-40!57;UBERON:0002616!2.35e-35!59;UBERON:0002780!4.74e-35!41;UBERON:0001890!4.74e-35!41;UBERON:0006240!4.74e-35!41;UBERON:0003080!4.31e-34!42;UBERON:0001017!7.92e-34!82;UBERON:0000955!9.47e-34!69;UBERON:0006238!9.47e-34!69;UBERON:0001893!2.82e-32!34;UBERON:0002020!3.31e-32!34;UBERON:0003528!3.31e-32!34;UBERON:0005743!6.78e-32!86;UBERON:0002791!5.51e-30!33;UBERON:0007023!4.13e-29!115;UBERON:0000073!3.91e-28!94;UBERON:0001016!3.91e-28!94;UBERON:0003075!7.38e-28!86;UBERON:0007284!7.38e-28!86;UBERON:0001869!2.76e-27!32;UBERON:0002346!2.82e-26!90;UBERON:0002308!5.19e-23!9;UBERON:0000125!5.19e-23!9;UBERON:0003056!9.00e-22!61;UBERON:0000025!1.54e-19!194;UBERON:0004111!4.00e-19!241;UBERON:0002619!2.44e-17!22;UBERON:0009663!3.56e-17!7;UBERON:0000033!4.45e-17!123;UBERON:0000477!3.27e-16!286;UBERON:0001950!4.22e-16!20;UBERON:0000153!6.15e-16!129;UBERON:0007811!6.15e-16!129;UBERON:0000956!4.98e-15!25;UBERON:0000203!4.98e-15!25;UBERON:0001986!7.68e-14!18;UBERON:0004638!7.68e-14!18;UBERON:0004852!7.68e-14!18;UBERON:0002420!3.41e-13!9;UBERON:0007245!3.41e-13!9;UBERON:0010009!3.41e-13!9;UBERON:0010011!3.41e-13!9;UBERON:0000454!3.41e-13!9;UBERON:0000200!8.26e-13!6;UBERON:0004121!3.11e-12!169;UBERON:0000924!8.94e-12!173;UBERON:0006601!8.94e-12!173;UBERON:0000487!5.37e-11!22;UBERON:0006331!7.92e-11!3;UBERON:0000483!1.08e-10!309;UBERON:0000988!1.26e-10!3;UBERON:0000119!1.72e-10!312;UBERON:0002298!2.10e-10!8;UBERON:0002771!7.58e-10!3;UBERON:0001638!1.66e-09!9;UBERON:0003920!1.66e-09!9;UBERON:0004582!1.66e-09!9;UBERON:0001871!1.80e-09!7;UBERON:0006914!1.83e-09!25;UBERON:0000369!3.84e-08!4;UBERON:0002435!3.84e-08!4;UBERON:0000204!3.84e-08!4;UBERON:0010082!3.84e-08!4;UBERON:0001875!5.93e-08!2;UBERON:0006514!5.93e-08!2;UBERON:0002148!1.28e-07!2;UBERON:0009662!1.28e-07!2;UBERON:0000055!1.68e-07!69;UBERON:0001897!2.16e-07!2;UBERON:0003076!2.55e-07!15;UBERON:0003057!2.55e-07!15;UBERON:0002360!3.51e-07!2;UBERON:0000094!3.51e-07!2;UBERON:0007645!3.51e-07!2;UBERON:0002066!4.29e-07!5;UBERON:0001473!4.83e-07!8;UBERON:0004536!4.83e-07!8;UBERON:0006558!4.83e-07!8 | ||
|ontology_enrichment_uberon_v019=UBERON:0002066;9.69e-40;5!UBERON:0002336;4.10e-23;1!UBERON:0011215;4.10e-23;1!UBERON:0001018;4.10e-23;1!UBERON:0002473;4.10e-23;1!UBERON:0005340;4.10e-23;1!UBERON:0003544;4.10e-23;1!UBERON:0005970;4.10e-23;1!UBERON:0002316;4.10e-23;1!UBERON:0001020;4.10e-23;1!UBERON:0002437;4.10e-23;1!UBERON:0001638;1.82e-22;9!UBERON:0010260;1.82e-22;9!UBERON:0003920;1.82e-22;9!UBERON:0004582;1.82e-22;9!UBERON:0004638;6.36e-20;18!UBERON:0001986;6.36e-20;18!UBERON:0004852;6.36e-20;18!UBERON:0000487;2.16e-16;22!UBERON:0006914;1.76e-14;25!UBERON:0005800;1.48e-12;2!UBERON:0001515;1.48e-12;2!UBERON:0005162;2.90e-12;2!UBERON:0000122;2.90e-12;2!UBERON:0001473;3.95e-12;8!UBERON:0004536;3.95e-12;8!UBERON:0006558;3.95e-12;8!UBERON:0002465;6.78e-10;10!UBERON:0000490;1.62e-08;33!UBERON:0002049;2.24e-07;75!UBERON:0007798;2.24e-07;75!UBERON:0000055;3.67e-07;65 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002066,6.50e-40,5;UBERON:0002336,5.13e-23,1;UBERON:0011215,5.13e-23,1;UBERON:0001018,5.13e-23,1;UBERON:0002473,5.13e-23,1;UBERON:0005340,5.13e-23,1;UBERON:0003544,5.13e-23,1;UBERON:0005970,5.13e-23,1;UBERON:0002316,5.13e-23,1;UBERON:0001020,5.13e-23,1;UBERON:0002437,5.13e-23,1;UBERON:0001638,1.46e-22,9;UBERON:0010260,1.46e-22,9;UBERON:0003920,1.46e-22,9;UBERON:0004582,1.46e-22,9;UBERON:0004638,5.49e-20,18;UBERON:0001986,5.49e-20,18;UBERON:0004852,5.49e-20,18;UBERON:0000487,1.92e-16,22;UBERON:0006914,1.58e-14,25;UBERON:0005800,1.48e-12,2;UBERON:0001515,1.48e-12,2;UBERON:0005162,3.24e-12,2;UBERON:0000122,3.24e-12,2;UBERON:0001473,3.95e-12,8;UBERON:0004536,3.95e-12,8;UBERON:0006558,3.95e-12,8;UBERON:0000055,9.91e-12,68;UBERON:0002049,3.18e-10,78;UBERON:0007798,3.18e-10,78;UBERON:0002465,6.78e-10,10;UBERON:0004535,2.70e-07,109;UBERON:0001009,4.27e-07,112 | |||
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|short_description=p@chr21:27284505..27284518,- | |short_description=p@chr21:27284505..27284518,- | ||
}} | }} |
Latest revision as of 17:01, 28 July 2015
Short description: | p@chr21:27284505..27284518, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr21:27284505..27284518, - |
Coexpression cluster: | C2629_Endothelial_adult_corpus_thalamus_optic_pons_substantia |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of umbilical vein | 7.35e-66 | 3 |
vein endothelial cell | 2.05e-33 | 6 |
endothelial cell of vascular tree | 4.69e-33 | 24 |
B-1 B cell | 6.40e-23 | 1 |
endothelial cell | 4.24e-22 | 36 |
blood vessel endothelial cell | 5.49e-20 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.49e-20 | 18 |
meso-epithelial cell | 1.05e-17 | 45 |
lymphangioblast | 7.79e-16 | 6 |
endothelial cell of lymphatic vessel | 7.79e-16 | 6 |
vascular lymphangioblast | 7.79e-16 | 6 |
lining cell | 9.48e-14 | 58 |
barrier cell | 9.48e-14 | 58 |
thoracic aorta endothelial cell | 1.48e-12 | 2 |
mature B cell | 3.62e-12 | 2 |
pre-B-II cell | 3.62e-12 | 2 |
transitional stage B cell | 3.62e-12 | 2 |
small pre-B-II cell | 3.62e-12 | 2 |
immature B cell | 3.62e-12 | 2 |
precursor B cell | 1.51e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
umbilical vein | 6.50e-40 | 5 |
corpus callosum | 5.13e-23 | 1 |
central nervous system cell part cluster | 5.13e-23 | 1 |
axon tract | 5.13e-23 | 1 |
intercerebral commissure | 5.13e-23 | 1 |
dorsal telencephalic commissure | 5.13e-23 | 1 |
brain white matter | 5.13e-23 | 1 |
brain commissure | 5.13e-23 | 1 |
white matter | 5.13e-23 | 1 |
nervous system commissure | 5.13e-23 | 1 |
cerebral hemisphere white matter | 5.13e-23 | 1 |
vein | 1.46e-22 | 9 |
umbilical blood vessel | 1.46e-22 | 9 |
venous blood vessel | 1.46e-22 | 9 |
venous system | 1.46e-22 | 9 |
blood vessel endothelium | 5.49e-20 | 18 |
endothelium | 5.49e-20 | 18 |
cardiovascular system endothelium | 5.49e-20 | 18 |
simple squamous epithelium | 1.92e-16 | 22 |
squamous epithelium | 1.58e-14 | 25 |
segment of aorta | 1.48e-12 | 2 |
thoracic aorta | 1.48e-12 | 2 |
multi cell component structure | 3.24e-12 | 2 |
neuron projection bundle | 3.24e-12 | 2 |
lymphatic vessel | 3.95e-12 | 8 |
lymph vasculature | 3.95e-12 | 8 |
lymphatic part of lymphoid system | 3.95e-12 | 8 |
vessel | 9.91e-12 | 68 |
vasculature | 3.18e-10 | 78 |
vascular system | 3.18e-10 | 78 |
lymphoid system | 6.78e-10 | 10 |
cardiovascular system | 2.70e-07 | 109 |
circulatory system | 4.27e-07 | 112 |
Ontology term | p-value | n |
---|---|---|
lymphatic system cancer | 6.40e-23 | 1 |
lymphosarcoma | 6.40e-23 | 1 |
lymphoma | 9.65e-10 | 10 |