FFCP PHASE1:Hg19::chr20:62796052..62796067,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4661 | |EntrezGene=4661 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7622 | |HGNC=7622 | ||
|TSSclassifier=strong | |||
|UniProt=Q01538,F5H7M8,Q7Z5W2 | |UniProt=Q01538,F5H7M8,Q7Z5W2 | ||
|association_with_transcript=225bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | |association_with_transcript=225bp_to_ENST00000328439,ENST00000536311,NM_004535,uc002yii.2_5end | ||
|cluster_id=chr20:62796052..62796067,+ | |||
|coexpression_cluster_id=C24 | |||
|description=CAGE_peak_5_at_MYT1_5end | |description=CAGE_peak_5_at_MYT1_5end | ||
|id=chr20:62796052..62796067,+ | |id=chr20:62796052..62796067,+ | ||
|ontology_enrichment_celltype=CL:0000242!6.45e-07!2 | |ontology_enrichment_celltype=CL:0000242!6.45e-07!2 | ||
|ontology_enrichment_celltype_v019=CL:0000123;5.86e-14;2!CL:0000242;5.86e-14;2!CL:0002319;1.08e-07;25!CL:0002553;1.51e-07;1!CL:0000167;3.00e-07;1!CL:0000164;3.00e-07;1!CL:0000502;3.00e-07;1!CL:0000172;3.00e-07;1!CL:0000173;3.00e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000242,5.87e-14,2;CL:0002319,1.23e-07,25;CL:0002553,1.72e-07,1;CL:0000167,2.50e-07,1;CL:0000164,2.50e-07,1;CL:0000502,2.50e-07,1;CL:0000172,2.50e-07,1;CL:0000173,2.50e-07,1;CL:0002351,2.50e-07,1;CL:0000047,3.20e-07,8 | |||
|ontology_enrichment_development_v019=UBERON:0006215;1.18e-19;3!CL:0002351;3.00e-07;1 | |||
|ontology_enrichment_disease=DOID:169!3.00e-07!6 | |ontology_enrichment_disease=DOID:169!3.00e-07!6 | ||
|ontology_enrichment_disease_v019=DOID:169;1.36e-09;6!DOID:4430;3.00e-07;1!DOID:5409;4.69e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:169,1.29e-09,6;DOID:4430,2.50e-07,1;DOID:5409,5.07e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0001049!2.50e-76!57;UBERON:0005068!2.50e-76!57;UBERON:0006241!2.50e-76!57;UBERON:0007135!2.50e-76!57;UBERON:0001017!1.47e-68!82;UBERON:0000073!2.56e-68!94;UBERON:0001016!2.56e-68!94;UBERON:0005743!1.25e-67!86;UBERON:0000955!1.20e-63!69;UBERON:0006238!1.20e-63!69;UBERON:0002616!2.37e-63!59;UBERON:0002780!8.13e-60!41;UBERON:0001890!8.13e-60!41;UBERON:0006240!8.13e-60!41;UBERON:0003080!3.42e-58!42;UBERON:0003075!1.05e-51!86;UBERON:0007284!1.05e-51!86;UBERON:0002346!7.36e-49!90;UBERON:0002020!8.22e-48!34;UBERON:0003528!8.22e-48!34;UBERON:0001893!1.65e-47!34;UBERON:0002791!2.06e-45!33;UBERON:0001869!1.67e-43!32;UBERON:0003056!1.27e-42!61;UBERON:0004121!2.04e-35!169;UBERON:0000924!2.87e-34!173;UBERON:0006601!2.87e-34!173;UBERON:0002619!6.30e-34!22;UBERON:0000033!7.15e-34!123;UBERON:0000956!1.22e-32!25;UBERON:0000203!1.22e-32!25;UBERON:0000153!1.01e-31!129;UBERON:0007811!1.01e-31!129;UBERON:0007023!4.28e-30!115;UBERON:0001950!1.17e-29!20;UBERON:0003076!2.32e-18!15;UBERON:0003057!2.32e-18!15;UBERON:0000025!3.03e-17!194;UBERON:0002420!1.18e-16!9;UBERON:0007245!1.18e-16!9;UBERON:0010009!1.18e-16!9;UBERON:0010011!1.18e-16!9;UBERON:0000454!1.18e-16!9;UBERON:0002308!1.21e-16!9;UBERON:0000125!1.21e-16!9;UBERON:0001871!1.19e-14!7;UBERON:0001894!1.44e-13!7;UBERON:0006222!1.44e-13!7;UBERON:0004733!7.25e-13!12;UBERON:0002028!7.25e-13!12;UBERON:0007277!7.25e-13!12;UBERON:0000349!1.97e-12!5;UBERON:0001872!2.77e-12!5;UBERON:0009663!2.96e-12!7;UBERON:0003296!8.83e-12!4;UBERON:0010133!8.83e-12!4;UBERON:0004732!9.31e-12!13;UBERON:0004111!1.47e-11!241;UBERON:0002298!1.12e-10!8;UBERON:0002680!2.77e-10!9;UBERON:0001895!2.77e-10!9;UBERON:0010092!2.77e-10!9;UBERON:0000200!3.70e-10!6;UBERON:0000064!6.80e-10!219;UBERON:0000483!1.26e-09!309;UBERON:0000119!2.05e-09!312;UBERON:0000477!1.60e-08!286;UBERON:0006331!3.17e-08!3;UBERON:0000988!3.51e-08!3;UBERON:0002771!4.49e-08!3;UBERON:0000475!9.65e-08!365;UBERON:0002240!1.31e-07!3;UBERON:0001905!5.62e-07!2;UBERON:0002757!5.62e-07!2;UBERON:0010134!5.62e-07!2;UBERON:0002784!5.62e-07!2;UBERON:0005408!5.62e-07!2;UBERON:0001899!5.62e-07!2 | |||
|ontology_enrichment_uberon_v019=UBERON:0003296;4.00e-25;4!UBERON:0010133;4.00e-25;4!UBERON:0001894;1.91e-14;7!UBERON:0001905;4.26e-14;2!UBERON:0002757;4.26e-14;2!UBERON:0010134;4.26e-14;2!UBERON:0005408;4.26e-14;2!UBERON:0001899;4.26e-14;2!UBERON:0000007;7.95e-13;2!UBERON:0002680;2.78e-11;9!UBERON:0001895;2.78e-11;9!UBERON:0002037;4.40e-10;6!UBERON:0000073;1.45e-09;53!UBERON:0002616;1.45e-09;53!UBERON:0000955;3.46e-09;68!UBERON:0001016;1.72e-08;83!UBERON:0004733;1.74e-08;12!UBERON:0002028;1.74e-08;12!UBERON:0004732;7.71e-08;13!UBERON:0002784;1.83e-07;4 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003296,3.34e-25,4;UBERON:0010133,3.34e-25,4;UBERON:0001016,6.30e-20,89;UBERON:0001017,1.10e-17,81;UBERON:0001894,1.73e-14,7;UBERON:0006222,1.73e-14,7;UBERON:0000955,2.37e-14,68;UBERON:0006238,2.37e-14,68;UBERON:0001905,4.27e-14,2;UBERON:0002757,4.27e-14,2;UBERON:0010134,4.27e-14,2;UBERON:0005408,4.27e-14,2;UBERON:0001899,4.27e-14,2;UBERON:0000073,4.83e-14,53;UBERON:0002616,4.83e-14,53;UBERON:0001049,3.50e-13,56;UBERON:0005068,3.50e-13,56;UBERON:0006241,3.50e-13,56;UBERON:0007135,3.50e-13,56;UBERON:0000007,6.64e-13,2;UBERON:0002680,3.40e-11,9;UBERON:0001895,3.40e-11,9;UBERON:0010092,3.40e-11,9;UBERON:0004121,3.56e-11,171;UBERON:0000924,3.56e-11,171;UBERON:0006601,3.56e-11,171;UBERON:0010371,3.99e-10,104;UBERON:0002037,4.47e-10,6;UBERON:0006215,4.47e-10,6;UBERON:0003075,6.79e-10,82;UBERON:0007284,6.79e-10,82;UBERON:0011216,1.74e-09,223;UBERON:0002346,2.52e-09,86;UBERON:0004733,2.01e-08,12;UBERON:0002028,2.01e-08,12;UBERON:0007277,2.01e-08,12;UBERON:0002780,3.42e-08,41;UBERON:0001890,3.42e-08,41;UBERON:0003080,3.42e-08,41;UBERON:0006240,3.42e-08,41;UBERON:0004732,8.83e-08,13;UBERON:0002784,1.83e-07,4;UBERON:0003076,9.44e-07,15;UBERON:0003057,9.44e-07,15 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,0,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,3.95529298144223,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,1.37897349296586,0.291604613383254,2.60437492399938,0,0.964771509003264,3.05163472634166,4.64432891711143,2.95547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0,0.665574309221114,0.496771223531068,0.415045904808692,0,0,0,0,4.68334905806882,4.49255188693558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,2.55788742607303,0.323474434190045,0,1.52893493468819,0,0,0,0,0,0,2.40171224485641,0,0,0.192687675289379,0,0.798169295285756,0,0.756215088665154,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0.206686796501184,0.19024743058172,2.7348740450911,0,0,0,0,17.6781605839835,13.1150651665341,1.82089681270989,1.36597314810779,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0.942693539496011,0,0,0,0,0.500335809236594,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,3.97901550322736,0,0,3.18827498561744,1.50962843566674,0,0,1.88126918544609,0,1.64973582971138,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,1.30905207102113,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286235987131057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0.207322110030741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.90419561572865,0,1.17261385734044,1.27587750330633,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994147647766298,0.844016498463076,0,3.95529298144223,0,0,0,1.76352923497993,0,0,0,0,0,0,0,0,0,0,0.371072392647405,3.99227596002388,0,0,0,0,0,0,1.37897349296586,0.291604613383254,2.60437492399938,0,0.964771509003264,3.05163472634166,4.64432891711143,2.95547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.611030144933625,0,0,0,0.404406797884062,0,0.468528891450678,0,0,0,0,0,1.83643656978294,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.35588444468319,0,0,0.316553979779393,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0.600420288709789,0.821432273351958,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.59045937961861,0.408610218334727,0,0,0,0,0,0.303747783290123,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,1.19009341568421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.854183854313742,0.3755727921195,0,0.665574309221114,0.496771223531068,0.415045904808692,0,0,0,0,4.68334905806882,4.49255188693558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691292180758654,0,0,0,0,0,0,0,0,0,0,0,0,0.622077260032973,2.55788742607303,0.323474434190045,0,1.52893493468819,0,0,0,0,0,0,2.40171224485641,0,0,0.192687675289379,0,0.798169295285756,0,0.756215088665154,0.276629009856872,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,1.56215619722769,0.206686796501184,0.19024743058172,2.7348740450911,0,0,0,0,17.6781605839835,13.1150651665341,1.82089681270989,1.36597314810779,0,0,0,0.40781839786099,0.460409414939944,0,0,0,0.942693539496011,0,0,0,0,0.500335809236594,1.73814972905999,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.467878926924211,3.97901550322736,0,0,3.18827498561744,1.50962843566674,0,0,1.88126918544609,0,1.64973582971138,0.392616934229891,0.297046400327086,0.4226557275834,0,0,0,0,0,0,0,0,0,0.430018749454354,0,0.271965960763659,1.30905207102113,0.5290268405154,0,0,0,0,0,0,0,0,0,0,0,0.267964130156178,0,0.620597975171371,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p5@MYT1 | |short_description=p5@MYT1 | ||
}} | }} |
Latest revision as of 15:36, 17 September 2015
Short description: | p5@MYT1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_5_at_MYT1_5end |
Coexpression cluster: | C24_pineal_eye_retina_retinoblastoma_medulloblastoma_small_cerebral |
Association with transcript: | 225bp_to_ENST00000328439, ENST00000536311, NM_004535, uc002yii.2_5end |
EntrezGene: | MYT1 |
HGNC: | 7622 |
UniProt: | Q01538F5H7M8Q7Z5W2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
Merkel cell | 5.87e-14 | 2 |
neural cell | 1.23e-07 | 25 |
lung fibroblast | 1.72e-07 | 1 |
peptide hormone secreting cell | 2.50e-07 | 1 |
enteroendocrine cell | 2.50e-07 | 1 |
type D enteroendocrine cell | 2.50e-07 | 1 |
somatostatin secreting cell | 2.50e-07 | 1 |
pancreatic D cell | 2.50e-07 | 1 |
progenitor cell of endocrine pancreas | 2.50e-07 | 1 |
neuronal stem cell | 3.20e-07 | 8 |
Ontology term | p-value | n |
---|---|---|
neuroendocrine tumor | 1.29e-09 | 6 |
somatostatinoma | 2.50e-07 | 1 |
lung small cell carcinoma | 5.07e-07 | 4 |