FFCP PHASE1:Hg19::chr20:60962143..60962171,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6227 | |EntrezGene=6227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10409 | |HGNC=10409 | ||
|TSSclassifier=strong | |||
|UniProt=Q13666 | |UniProt=Q13666 | ||
|association_with_transcript=-2bp_to_ENST00000337102_5end | |association_with_transcript=-2bp_to_ENST00000337102_5end | ||
|cluster_id=chr20:60962143..60962171,+ | |||
|description=CAGE_peak_1_at_RPS21_5end | |description=CAGE_peak_1_at_RPS21_5end | ||
|id=chr20:60962143..60962171,+ | |id=chr20:60962143..60962171,+ | ||
|ontology_enrichment_celltype=CL:0000003!7.40e-21!722;CL:0000012!4.27e-19!682;CL:0000548!1.75e-17!679;CL:0000004!1.75e-17!679;CL:0000255!1.75e-17!679;CL:0000542!9.11e-11!53;CL:0000051!9.11e-11!53;CL:0000838!1.05e-10!52;CL:0000144!1.38e-10!625;CL:0000063!2.16e-09!578;CL:0000791!2.04e-08!18;CL:0000789!2.04e-08!18;CL:0002420!2.04e-08!18;CL:0002419!2.04e-08!18;CL:0000790!2.04e-08!18;CL:0002371!5.10e-08!591;CL:0000084!1.32e-07!25;CL:0000827!1.32e-07!25;CL:0000236!2.20e-07!14 | |ontology_enrichment_celltype=CL:0000003!7.40e-21!722;CL:0000012!4.27e-19!682;CL:0000548!1.75e-17!679;CL:0000004!1.75e-17!679;CL:0000255!1.75e-17!679;CL:0000542!9.11e-11!53;CL:0000051!9.11e-11!53;CL:0000838!1.05e-10!52;CL:0000144!1.38e-10!625;CL:0000063!2.16e-09!578;CL:0000791!2.04e-08!18;CL:0000789!2.04e-08!18;CL:0002420!2.04e-08!18;CL:0002419!2.04e-08!18;CL:0000790!2.04e-08!18;CL:0002371!5.10e-08!591;CL:0000084!1.32e-07!25;CL:0000827!1.32e-07!25;CL:0000236!2.20e-07!14 | ||
|ontology_enrichment_celltype_v019=CL:0000791;2.03e-08;18!CL:0000789;2.03e-08;18!CL:0002419;2.03e-08;18!CL:0000084;1.31e-07;25!CL:0000236;1.44e-07;13!CL:0000542;1.83e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000542,9.11e-11,53;CL:0000051,9.11e-11,53;CL:0000838,1.05e-10,52;CL:0000791,2.04e-08,18;CL:0000789,2.04e-08,18;CL:0002420,2.04e-08,18;CL:0002419,2.04e-08,18;CL:0000790,2.04e-08,18;CL:0000084,1.32e-07,25;CL:0000827,1.32e-07,25;CL:0000236,2.20e-07,14 | |||
|ontology_enrichment_development_v019=CL:0000790;2.03e-08;18!CL:0000051;1.83e-07;53 | |||
|ontology_enrichment_disease=DOID:162!9.82e-13!235;DOID:14566!1.12e-12!239;DOID:0050686!1.62e-08!137;DOID:0050687!2.17e-08!143 | |ontology_enrichment_disease=DOID:162!9.82e-13!235;DOID:14566!1.12e-12!239;DOID:0050686!1.62e-08!137;DOID:0050687!2.17e-08!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,9.82e-13,235;DOID:14566,1.12e-12,239;DOID:0050686,1.62e-08,137;DOID:0050687,2.17e-08,143 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@RPS21 | |short_description=p1@RPS21 | ||
}} | }} |
Latest revision as of 10:34, 17 September 2015
Short description: | p1@RPS21 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_RPS21_5end |
Coexpression cluster: | NA |
Association with transcript: | -2bp_to_ENST00000337102_5end |
EntrezGene: | RPS21 |
HGNC: | 10409 |
UniProt: | Q13666 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte | 9.11e-11 | 53 |
common lymphoid progenitor | 9.11e-11 | 53 |
lymphoid lineage restricted progenitor cell | 1.05e-10 | 52 |
mature alpha-beta T cell | 2.04e-08 | 18 |
alpha-beta T cell | 2.04e-08 | 18 |
immature T cell | 2.04e-08 | 18 |
mature T cell | 2.04e-08 | 18 |
immature alpha-beta T cell | 2.04e-08 | 18 |
T cell | 1.32e-07 | 25 |
pro-T cell | 1.32e-07 | 25 |
B cell | 2.20e-07 | 14 |
Ontology term | p-value | n |
---|---|---|
cancer | 9.82e-13 | 235 |
disease of cellular proliferation | 1.12e-12 | 239 |
organ system cancer | 1.62e-08 | 137 |
cell type cancer | 2.17e-08 | 143 |