FFCP PHASE1:Hg19::chr6:30128954..30128971,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10107 | |EntrezGene=10107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10072 | |HGNC=10072 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8A5,Q9UDY6 | |UniProt=C9J8A5,Q9UDY6 | ||
|association_with_transcript=-243bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | |association_with_transcript=-243bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | ||
|cluster_id=chr6:30128954..30128971,- | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_3_at_TRIM10_5end | |description=CAGE_peak_3_at_TRIM10_5end | ||
|id=chr6:30128954..30128971,- | |id=chr6:30128954..30128971,- | ||
|ontology_enrichment_celltype=CL:0000764!3.30e-16!2;CL:0000765!3.30e-16!2;CL:0000050!3.30e-16!2;CL:0000038!3.30e-16!2;CL:0000558!3.30e-16!2;CL:0000547!3.30e-16!2;CL:0000549!3.30e-16!2;CL:0000550!3.30e-16!2;CL:0000552!3.30e-16!2 | |ontology_enrichment_celltype=CL:0000764!3.30e-16!2;CL:0000765!3.30e-16!2;CL:0000050!3.30e-16!2;CL:0000038!3.30e-16!2;CL:0000558!3.30e-16!2;CL:0000547!3.30e-16!2;CL:0000549!3.30e-16!2;CL:0000550!3.30e-16!2;CL:0000552!3.30e-16!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.11e-34;2!CL:0000558;1.11e-34;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.11e-34,2;CL:0000765,1.11e-34,2;CL:0000050,1.11e-34,2;CL:0000038,1.11e-34,2;CL:0000558,1.11e-34,2;CL:0000547,1.11e-34,2;CL:0000549,1.11e-34,2;CL:0000550,1.11e-34,2;CL:0000552,1.11e-34,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.75e-38!15;UBERON:0000179!1.75e-38!15;UBERON:0000463!1.75e-38!15;UBERON:0007023!7.42e-17!115;UBERON:0003978!2.16e-10!3;UBERON:0009751!2.16e-10!3;UBERON:0000946!2.16e-10!3;UBERON:0002523!2.16e-10!3;UBERON:0005983!2.16e-10!3;UBERON:0002165!2.16e-10!3;UBERON:0002062!2.16e-10!3;UBERON:0007280!2.16e-10!3;UBERON:0002106!2.38e-10!3;UBERON:0004854!2.38e-10!3;UBERON:0009034!2.38e-10!3;UBERON:0002095!2.38e-10!3;UBERON:0004782!2.38e-10!3;UBERON:0003281!2.38e-10!3;UBERON:0009664!2.38e-10!3;UBERON:0002296!2.38e-10!3;UBERON:0005602!2.38e-10!3;UBERON:0001179!2.38e-10!3;UBERON:0006293!2.38e-10!3;UBERON:0002135!1.84e-08!1;UBERON:0002146!2.29e-08!1;UBERON:0005623!2.29e-08!1;UBERON:0002363!4.07e-08!1;UBERON:0007647!4.07e-08!1;UBERON:0010115!4.07e-08!1;UBERON:0004535!2.44e-07!110;UBERON:0001009!4.35e-07!113 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.40e-87;15!UBERON:0000179;1.40e-87;15!UBERON:0000463;1.40e-87;15!UBERON:0002390;2.27e-37;32!UBERON:0002193;8.94e-21;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.48e-87,15;UBERON:0000179,1.48e-87,15;UBERON:0000463,1.48e-87,15;UBERON:0007023,9.89e-17,114;UBERON:0002390,8.34e-13,98;UBERON:0003061,8.34e-13,98;UBERON:0004535,1.45e-11,109;UBERON:0002193,1.45e-11,108;UBERON:0001009,3.09e-11,112 | |||
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|short_description=p3@TRIM10 | |short_description=p3@TRIM10 | ||
}} | }} |
Latest revision as of 15:47, 17 September 2015
Short description: | p3@TRIM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TRIM10_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | -243bp_to_ENST00000376704, ENST00000376706, ENST00000449742, NM_006778, NM_052828, uc003npn.2, uc003npo.3_5end |
EntrezGene: | TRIM10 |
HGNC: | 10072 |
UniProt: | C9J8A5Q9UDY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.11e-34 | 2 |
erythroblast | 1.11e-34 | 2 |
megakaryocyte-erythroid progenitor cell | 1.11e-34 | 2 |
erythroid progenitor cell | 1.11e-34 | 2 |
reticulocyte | 1.11e-34 | 2 |
proerythroblast | 1.11e-34 | 2 |
basophilic erythroblast | 1.11e-34 | 2 |
polychromatophilic erythroblast | 1.11e-34 | 2 |
orthochromatic erythroblast | 1.11e-34 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 1.48e-87 | 15 |
haemolymphatic fluid | 1.48e-87 | 15 |
organism substance | 1.48e-87 | 15 |
adult organism | 9.89e-17 | 114 |
hematopoietic system | 8.34e-13 | 98 |
blood island | 8.34e-13 | 98 |
cardiovascular system | 1.45e-11 | 109 |
hemolymphoid system | 1.45e-11 | 108 |
circulatory system | 3.09e-11 | 112 |