FFCP PHASE1:Hg19::chr6:30128747..30128756,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10107 | |EntrezGene=10107 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10072 | |HGNC=10072 | ||
|TSSclassifier=strong | |||
|UniProt=C9J8A5,Q9UDY6 | |UniProt=C9J8A5,Q9UDY6 | ||
|association_with_transcript=-36bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | |association_with_transcript=-36bp_to_ENST00000376704,ENST00000376706,ENST00000449742,NM_006778,NM_052828,uc003npn.2,uc003npo.3_5end | ||
|cluster_id=chr6:30128747..30128756,- | |||
|coexpression_cluster_id=C14 | |||
|description=CAGE_peak_8_at_TRIM10_5end | |description=CAGE_peak_8_at_TRIM10_5end | ||
|id=chr6:30128747..30128756,- | |id=chr6:30128747..30128756,- | ||
|ontology_enrichment_celltype=CL:0000764!4.73e-28!2;CL:0000765!4.73e-28!2;CL:0000050!4.73e-28!2;CL:0000038!4.73e-28!2;CL:0000558!4.73e-28!2;CL:0000547!4.73e-28!2;CL:0000549!4.73e-28!2;CL:0000550!4.73e-28!2;CL:0000552!4.73e-28!2 | |ontology_enrichment_celltype=CL:0000764!4.73e-28!2;CL:0000765!4.73e-28!2;CL:0000050!4.73e-28!2;CL:0000038!4.73e-28!2;CL:0000558!4.73e-28!2;CL:0000547!4.73e-28!2;CL:0000549!4.73e-28!2;CL:0000550!4.73e-28!2;CL:0000552!4.73e-28!2 | ||
|ontology_enrichment_celltype_v019=CL:0000764;5.00e-45;2!CL:0000558;5.00e-45;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,4.00e-45,2;CL:0000765,4.00e-45,2;CL:0000050,4.00e-45,2;CL:0000038,4.00e-45,2;CL:0000558,4.00e-45,2;CL:0000547,4.00e-45,2;CL:0000549,4.00e-45,2;CL:0000550,4.00e-45,2;CL:0000552,4.00e-45,2 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!1.31e-70!15;UBERON:0000179!1.31e-70!15;UBERON:0000463!1.31e-70!15;UBERON:0007023!8.15e-13!115;UBERON:0002390!8.59e-12!102;UBERON:0003061!8.59e-12!102;UBERON:0004535!5.66e-11!110;UBERON:0001009!1.19e-10!113;UBERON:0002193!1.20e-10!112 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;4.77e-71;15!UBERON:0000179;4.77e-71;15!UBERON:0000463;4.77e-71;15!UBERON:0002390;6.56e-32;32!UBERON:0002193;1.21e-20;42 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,5.29e-71,15;UBERON:0000179,5.29e-71,15;UBERON:0000463,5.29e-71,15;UBERON:0007023,1.98e-15,114;UBERON:0002390,9.25e-11,98;UBERON:0003061,9.25e-11,98;UBERON:0004535,9.31e-10,109;UBERON:0002193,9.31e-10,108;UBERON:0001009,1.72e-09,112 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13927654608617,3.92153176537351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,6.117097657139,1.70894156152249,0.476463550915578,0.822724546172388,4.53931317834902,4.86028293514303,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.13927654608617,3.92153176537351,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.55213326462519,6.117097657139,1.70894156152249,0.476463550915578,0.822724546172388,4.53931317834902,4.86028293514303,2.37937552888281,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.3948309234694,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.158936578980379,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0671834724867263,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0644578879735772,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p8@TRIM10 | |short_description=p8@TRIM10 | ||
}} | }} |
Latest revision as of 15:44, 17 September 2015
Short description: | p8@TRIM10 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_TRIM10_5end |
Coexpression cluster: | C14_Whole_blood_Reticulocytes_liver_Neutrophils_Eosinophils_spleen |
Association with transcript: | -36bp_to_ENST00000376704, ENST00000376706, ENST00000449742, NM_006778, NM_052828, uc003npn.2, uc003npo.3_5end |
EntrezGene: | TRIM10 |
HGNC: | 10072 |
UniProt: | C9J8A5Q9UDY6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 4.00e-45 | 2 |
erythroblast | 4.00e-45 | 2 |
megakaryocyte-erythroid progenitor cell | 4.00e-45 | 2 |
erythroid progenitor cell | 4.00e-45 | 2 |
reticulocyte | 4.00e-45 | 2 |
proerythroblast | 4.00e-45 | 2 |
basophilic erythroblast | 4.00e-45 | 2 |
polychromatophilic erythroblast | 4.00e-45 | 2 |
orthochromatic erythroblast | 4.00e-45 | 2 |
Ontology term | p-value | n |
---|---|---|
blood | 5.29e-71 | 15 |
haemolymphatic fluid | 5.29e-71 | 15 |
organism substance | 5.29e-71 | 15 |
adult organism | 1.98e-15 | 114 |
hematopoietic system | 9.25e-11 | 98 |
blood island | 9.25e-11 | 98 |
cardiovascular system | 9.31e-10 | 109 |
hemolymphoid system | 9.31e-10 | 108 |
circulatory system | 1.72e-09 | 112 |