FFCP PHASE1:Hg19::chr20:42543441..42543497,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=84969 | |EntrezGene=84969 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=16095 | |HGNC=16095 | ||
|TSSclassifier=strong | |||
|UniProt=G3XAC7 | |UniProt=G3XAC7 | ||
|association_with_transcript=0bp_to_ENST00000341197,ENST00000372992,NM_001098797,uc010ggo.2_5end | |association_with_transcript=0bp_to_ENST00000341197,ENST00000372992,NM_001098797,uc010ggo.2_5end | ||
|cluster_id=chr20:42543441..42543497,+ | |||
|description=CAGE_peak_1_at_TOX2_5end | |description=CAGE_peak_1_at_TOX2_5end | ||
|id=chr20:42543441..42543497,+ | |id=chr20:42543441..42543497,+ | ||
|ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000183!1.34e-16!59;CL:0000222!1.90e-16!119;CL:0000187!1.95e-15!54;CL:0000192!1.30e-13!42;CL:0000514!1.30e-13!42;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000393!3.95e-13!60;CL:0000211!3.95e-13!60;CL:0000057!2.56e-11!75;CL:0000359!7.12e-11!32;CL:0000115!3.19e-09!35;CL:0002139!4.19e-08!24;CL:0000071!7.74e-08!18;CL:0002546!7.74e-08!18;CL:0002078!8.58e-07!44 | |ontology_enrichment_celltype=CL:0000055!1.29e-17!180;CL:0000183!1.34e-16!59;CL:0000222!1.90e-16!119;CL:0000187!1.95e-15!54;CL:0000192!1.30e-13!42;CL:0000514!1.30e-13!42;CL:0000680!3.23e-13!57;CL:0000056!3.23e-13!57;CL:0000355!3.23e-13!57;CL:0000393!3.95e-13!60;CL:0000211!3.95e-13!60;CL:0000057!2.56e-11!75;CL:0000359!7.12e-11!32;CL:0000115!3.19e-09!35;CL:0002139!4.19e-08!24;CL:0000071!7.74e-08!18;CL:0002546!7.74e-08!18;CL:0002078!8.58e-07!44 | ||
|ontology_enrichment_celltype_v019=CL:0000192;1.39e-10;43!CL:0000359;1.98e-10;32!CL:0000187;4.55e-09;55!CL:0000115;9.54e-09;36!CL:0002139;3.47e-08;24!CL:0000071;6.90e-08;18!CL:0000393;5.62e-07;61!CL:0000211;5.62e-07;61 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,2.99e-17,121;CL:0000187,2.88e-16,55;CL:0000192,2.68e-14,43;CL:0000514,2.68e-14,43;CL:0000680,7.83e-14,58;CL:0000056,7.83e-14,58;CL:0000355,7.83e-14,58;CL:0000393,1.56e-13,61;CL:0000211,1.56e-13,61;CL:0000057,1.33e-11,76;CL:0000359,4.82e-11,32;CL:0000115,6.76e-10,36;CL:0002139,3.18e-08,24;CL:0000071,5.94e-08,18;CL:0002546,5.94e-08,18;CL:0002078,4.69e-07,45 | |||
|ontology_enrichment_development_v019=CL:0000514;1.39e-10;43!CL:0002546;6.90e-08;18!CL:0000355;2.06e-07;58 | |||
|ontology_enrichment_disease= | |ontology_enrichment_disease= | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!5.81e-23!79;UBERON:0007798!5.81e-23!79;UBERON:0000055!1.72e-22!69;UBERON:0001981!3.49e-20!60;UBERON:0007500!3.49e-20!60;UBERON:0004537!3.49e-20!60;UBERON:0006965!3.49e-20!60;UBERON:0004535!3.00e-18!110;UBERON:0001009!2.26e-17!113;UBERON:0004872!2.71e-17!84;UBERON:0001637!6.87e-16!42;UBERON:0003509!6.87e-16!42;UBERON:0004572!6.87e-16!42;UBERON:0000477!5.04e-15!286;UBERON:0003914!9.45e-15!118;UBERON:0004290!9.72e-15!70;UBERON:0000914!3.34e-14!83;UBERON:0002329!3.34e-14!83;UBERON:0003077!3.34e-14!83;UBERON:0003059!3.34e-14!83;UBERON:0007282!3.34e-14!83;UBERON:0009618!3.34e-14!83;UBERON:0007285!3.34e-14!83;UBERON:0000490!1.12e-13!138;UBERON:0004111!2.36e-13!241;UBERON:0000483!8.15e-13!309;UBERON:0000119!3.10e-12!312;UBERON:0002385!4.45e-12!63;UBERON:0001015!4.45e-12!63;UBERON:0000383!4.45e-12!63;UBERON:0000475!4.58e-12!365;UBERON:0001134!4.61e-12!61;UBERON:0002036!4.61e-12!61;UBERON:0003082!4.61e-12!61;UBERON:0004573!5.73e-12!33;UBERON:0004571!5.73e-12!33;UBERON:0000025!2.10e-11!194;UBERON:0000481!3.21e-11!347;UBERON:0005256!1.41e-10!143;UBERON:0000486!1.03e-09!82;UBERON:0000487!1.00e-08!22;UBERON:0000947!1.85e-08!21;UBERON:0010191!1.85e-08!21;UBERON:0001986!7.74e-08!18;UBERON:0004638!7.74e-08!18;UBERON:0004852!7.74e-08!18;UBERON:0002100!9.40e-08!216;UBERON:0003104!1.04e-07!238;UBERON:0009142!1.04e-07!238;UBERON:0006914!2.28e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;6.75e-12;42!UBERON:0003509;6.75e-12;42!UBERON:0004572;6.75e-12;42!UBERON:0007500;8.02e-12;56!UBERON:0001981;8.02e-12;56!UBERON:0004537;8.02e-12;56!UBERON:0004573;3.26e-11;33!UBERON:0004571;3.26e-11;33!UBERON:0000055;4.62e-11;65!UBERON:0002049;9.02e-10;75!UBERON:0007798;9.02e-10;75!UBERON:0000487;8.28e-09;22!UBERON:0003914;1.10e-08;74!UBERON:0000947;1.51e-08;21!UBERON:0010191;1.51e-08;21!UBERON:0004638;6.90e-08;18!UBERON:0001986;6.90e-08;18!UBERON:0004852;6.90e-08;18!UBERON:0006914;2.40e-07;25 | |||
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| ||
|short_description=p1@TOX2 | |short_description=p1@TOX2 | ||
}} | }} |
Latest revision as of 07:18, 16 September 2015
Short description: | p1@TOX2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_TOX2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000341197, ENST00000372992, NM_001098797, uc010ggo.2_5end |
EntrezGene: | TOX2 |
HGNC: | 16095 |
UniProt: | G3XAC7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 2.99e-17 | 121 |
muscle cell | 2.88e-16 | 55 |
smooth muscle cell | 2.68e-14 | 43 |
smooth muscle myoblast | 2.68e-14 | 43 |
muscle precursor cell | 7.83e-14 | 58 |
myoblast | 7.83e-14 | 58 |
multi-potent skeletal muscle stem cell | 7.83e-14 | 58 |
electrically responsive cell | 1.56e-13 | 61 |
electrically active cell | 1.56e-13 | 61 |
fibroblast | 1.33e-11 | 76 |
vascular associated smooth muscle cell | 4.82e-11 | 32 |
endothelial cell | 6.76e-10 | 36 |
endothelial cell of vascular tree | 3.18e-08 | 24 |
blood vessel endothelial cell | 5.94e-08 | 18 |
embryonic blood vessel endothelial progenitor cell | 5.94e-08 | 18 |
meso-epithelial cell | 4.69e-07 | 45 |