FFCP PHASE1:Hg19::chr6:25726781..25726797,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=221613 | |EntrezGene=221613 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18729 | |HGNC=18729 | ||
|TSSclassifier=strong | |||
|UniProt=Q96QV6 | |UniProt=Q96QV6 | ||
|association_with_transcript=0bp_to_ENST00000297012,NM_170745,uc003nfc.2_5end | |association_with_transcript=0bp_to_ENST00000297012,NM_170745,uc003nfc.2_5end | ||
|cluster_id=chr6:25726781..25726797,- | |||
|coexpression_cluster_id=C1 | |||
|description=CAGE_peak_1_at_HIST1H2AA_5end | |description=CAGE_peak_1_at_HIST1H2AA_5end | ||
|id=chr6:25726781..25726797,- | |id=chr6:25726781..25726797,- | ||
|ontology_enrichment_celltype=CL:0002150!3.94e-08!3;CL:0000861!3.94e-08!3 | |ontology_enrichment_celltype=CL:0002150!3.94e-08!3;CL:0000861!3.94e-08!3 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000054,9.54e-07,2;CL:0000137,9.54e-07,2;CL:0000092,9.54e-07,2 | |||
|ontology_enrichment_development_v019=UBERON:0009117;8.09e-11;10!UBERON:0005564;8.09e-11;10!UBERON:0007297;7.83e-07;2 | |||
|ontology_enrichment_disease=DOID:162!2.67e-13!235;DOID:14566!9.35e-13!239;DOID:0050686!3.45e-08!137;DOID:0050687!1.83e-07!143 | |||
|ontology_enrichment_disease_v019=DOID:1036;1.93e-22;8!DOID:0060085;3.85e-12;1!DOID:3165;3.85e-12;1!DOID:0060121;3.85e-12;1!DOID:2438;3.85e-12;1!DOID:4418;3.85e-12;1!DOID:2355;3.85e-12;1!DOID:201;3.43e-08;6!DOID:0060100;3.43e-08;6!DOID:3910;5.41e-07;2!DOID:4231;8.77e-07;2!DOID:1907;8.77e-07;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,1.83e-22,8;DOID:0060085,3.08e-12,1;DOID:3165,3.08e-12,1;DOID:0060121,3.08e-12,1;DOID:2438,3.08e-12,1;DOID:4418,3.08e-12,1;DOID:2355,3.85e-12,1;DOID:201,3.25e-08,6;DOID:0060100,3.25e-08,6;DOID:2531,2.08e-07,51;DOID:0060083,2.08e-07,51;DOID:3910,5.41e-07,2;DOID:4231,9.02e-07,2;DOID:1907,9.02e-07,2;DOID:200,9.54e-07,2;DOID:4305,9.54e-07,2 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0003135;1.16e-16;11!UBERON:0000473;2.20e-13;8!UBERON:0005795;2.08e-12;1!UBERON:0001301;2.08e-12;1!UBERON:0003101;1.93e-08;22!UBERON:0000079;1.93e-08;22!UBERON:0004903;5.41e-07;2!UBERON:0002173;5.41e-07;2!UBERON:0002186;5.41e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003135,1.19e-16,11;UBERON:0000473,2.20e-13,8;UBERON:0001301,2.20e-12,1;UBERON:0003101,1.95e-08,22;UBERON:0000079,1.95e-08,22;UBERON:0004903,5.41e-07,2;UBERON:0002173,5.41e-07,2;UBERON:0002186,5.41e-07,2 | |||
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|phase1_expression=0,0,0,0,0,0,0,0,0,0,0.697801167972428,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.289693037921647,0,0,0,0,0,1570.63558383082,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0.275118041940067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0,0.232387885739037,0.310983165046111,0,0,0,0,0,0,0,0.118306800039844,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.790204397959275,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.9273691048295,0.54941678891006,0.82509499920588,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255897791311334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.22386941009813,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.185803175125719,0,0.0711418433484141,0,0,0,0,0,0,0,0,0,0.169291777801603,0,0,0,0,0,0,0,0,0.556812347790485,0,0,0,0,0.37428108081644,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.20453736500431,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,154.077712077416,0,0.689486746482929,0.291604613383254,0,0,0,0,0,0,0,0.21787692703798,0,0,0.113942055847001,0,0.179515288819544,0,0,0,0,0,0,0,10.3774003883903,9.01887657861602,11.2440463273815,1.51802986179348,0,0,0,0,0,0,0,0,0.593042257361244,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0,73.8087989325158,0.414752765588989,0,0,0,0,0,0.277349346026277,0.173559738335131,0,0,4.71762004253481,0,0.580537987734511,0.877071805034227,0.328461828212837,0,0,0,0.411125773940253,1.58971689362392,0.0633107959558787,0.391102765469606,0,0,0,0,0,0,0,0,0,0.135904206073614,0,0.101998217636322,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0824158583811665,0.0674035438541849,0,1.27009998098677,0,0,0,0.550157746388935,0.415440338029185,0,0,0,0.335434687599266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.197611631897944,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138348634936231,0,0,0,0,0.468334905806882,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.857766365499703,0,0,0,0,0,0,0,0,0,0,0.512483037175893,0,0,0,0,0,0,0,0.491545817507439,0,0,0,0,0,2.39337735327393,0,0,0,0,0.157265941855896,0,0,0,0,0,0,0,0,0,0,0.128458450192919,0,0,2.66651273512982,0.252071696221718,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0634158101939068,0,0,0,0,0,0,0,0,0,0,0.576169937778896,0,0,0,0,0.222462803784138,0,0,0,0.913158720509496,0,0,0.142953088353313,1.26410889386181,0,0.173858272302579,0,0.207216164163037,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.701818390386317,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0,0,0,0,0,0,0,0,0.630832124175395,0,0.253397002022874,0.407955318967927,0,0,5.76627340372463,4515.42529073023,5984.71088290809,0,0,0,0,0,0,0.672791175483681,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,4.88275413978886,0,0,0 | ||
|short_description=p1@HIST1H2AA | |short_description=p1@HIST1H2AA | ||
}} | }} |
Latest revision as of 07:56, 17 September 2015
Short description: | p1@HIST1H2AA |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_HIST1H2AA_5end |
Coexpression cluster: | C1_testis_epididymis_embryonic_medulla_pituitary_trachea_caudate |
Association with transcript: | 0bp_to_ENST00000297012, NM_170745, uc003nfc.2_5end |
EntrezGene: | HIST1H2AA |
HGNC: | 18729 |
UniProt: | Q96QV6 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone matrix secreting cell | 9.54e-07 | 2 |
osteocyte | 9.54e-07 | 2 |
osteoclast | 9.54e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
male reproductive organ | 1.19e-16 | 11 |
testis | 2.20e-13 | 8 |
epididymis | 2.20e-12 | 1 |
male organism | 1.95e-08 | 22 |
male reproductive system | 1.95e-08 | 22 |
bronchoalveolar duct junction | 5.41e-07 | 2 |
alveolar duct | 5.41e-07 | 2 |
bronchiole | 5.41e-07 | 2 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 1.83e-22 | 8 |
organ system benign neoplasm | 3.08e-12 | 1 |
skin benign neoplasm | 3.08e-12 | 1 |
integumentary system benign neoplasm | 3.08e-12 | 1 |
dermis tumor | 3.08e-12 | 1 |
cutaneous fibrous histiocytoma | 3.08e-12 | 1 |
anemia | 3.85e-12 | 1 |
connective tissue cancer | 3.25e-08 | 6 |
musculoskeletal system cancer | 3.25e-08 | 6 |
hematologic cancer | 2.08e-07 | 51 |
immune system cancer | 2.08e-07 | 51 |
lung adenocarcinoma | 5.41e-07 | 2 |
histiocytoma | 9.02e-07 | 2 |
malignant fibroxanthoma | 9.02e-07 | 2 |
giant cell tumor | 9.54e-07 | 2 |
bone giant cell tumor | 9.54e-07 | 2 |