FFCP PHASE1:Hg19::chr6:20402102..20402152,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1871 | |EntrezGene=1871 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3115 | |HGNC=3115 | ||
|TSSclassifier=strong | |||
|UniProt=F5H536,O00716 | |UniProt=F5H536,O00716 | ||
|association_with_transcript=0bp_to_ENST00000378646,NM_001949,uc003ncz.2,uc003nda.2_5end | |association_with_transcript=0bp_to_ENST00000378646,NM_001949,uc003ncz.2,uc003nda.2_5end | ||
|cluster_id=chr6:20402102..20402152,+ | |||
|coexpression_cluster_id=C4256 | |||
|description=CAGE_peak_1_at_E2F3_5end | |description=CAGE_peak_1_at_E2F3_5end | ||
|id=chr6:20402102..20402152,+ | |id=chr6:20402102..20402152,+ | ||
|ontology_enrichment_celltype=CL:0000066!3.02e-21!254;CL:0000012!2.72e-15!682;CL:0000548!1.17e-14!679;CL:0000004!1.17e-14!679;CL:0000255!1.17e-14!679;CL:0002321!2.81e-10!248;CL:0000220!9.76e-10!246;CL:0000003!1.87e-08!722;CL:0000133!2.88e-07!59;CL:0000063!6.07e-07!578 | |ontology_enrichment_celltype=CL:0000066!3.02e-21!254;CL:0000012!2.72e-15!682;CL:0000548!1.17e-14!679;CL:0000004!1.17e-14!679;CL:0000255!1.17e-14!679;CL:0002321!2.81e-10!248;CL:0000220!9.76e-10!246;CL:0000003!1.87e-08!722;CL:0000133!2.88e-07!59;CL:0000063!6.07e-07!578 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000066,1.17e-21,253;CL:0002321,6.89e-10,250;CL:0000133,5.33e-07,59 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.53e-58!235;DOID:14566!8.46e-58!239;DOID:0050687!9.44e-32!143;DOID:0050686!1.26e-28!137;DOID:305!1.26e-24!106;DOID:2531!2.47e-22!51;DOID:0060083!2.47e-22!51;DOID:1240!3.62e-19!39;DOID:8692!1.82e-15!31;DOID:3095!4.82e-07!22;DOID:2994!4.82e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:1240;1.22e-15;39!DOID:8692;2.34e-15;31!DOID:2531;1.84e-14;51!DOID:0060083;1.84e-14;51!DOID:305;2.28e-08;106!DOID:14566;4.99e-08;239!DOID:0050687;5.19e-08;143!DOID:162;1.26e-07;235!DOID:3095;4.46e-07;22!DOID:2994;4.46e-07;22!DOID:0050686;7.95e-07;137 | |||
|ontology_enrichment_disease_v019_2=DOID:162,2.30e-58,235;DOID:14566,1.26e-57,239;DOID:0050687,1.11e-31,143;DOID:0050686,2.98e-28,137;DOID:305,8.33e-25,106;DOID:2531,1.02e-22,51;DOID:0060083,1.02e-22,51;DOID:1240,1.71e-19,39;DOID:8692,1.01e-15,31;DOID:3095,5.65e-07,22;DOID:2994,5.65e-07,22 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p1@E2F3 | |short_description=p1@E2F3 | ||
}} | }} |
Latest revision as of 03:04, 17 September 2015
Short description: | p1@E2F3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_E2F3_5end |
Coexpression cluster: | C4256_transitionalcell_embryonic_acute_retinoblastoma_iPS_Hodgkin_chronic |
Association with transcript: | 0bp_to_ENST00000378646, NM_001949, uc003ncz.2, uc003nda.2_5end |
EntrezGene: | E2F3 |
HGNC: | 3115 |
UniProt: | F5H536O00716 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell | 1.17e-21 | 253 |
embryonic cell | 6.89e-10 | 250 |
neurectodermal cell | 5.33e-07 | 59 |
Ontology term | p-value | n |
---|---|---|
cancer | 2.30e-58 | 235 |
disease of cellular proliferation | 1.26e-57 | 239 |
cell type cancer | 1.11e-31 | 143 |
organ system cancer | 2.98e-28 | 137 |
carcinoma | 8.33e-25 | 106 |
hematologic cancer | 1.02e-22 | 51 |
immune system cancer | 1.02e-22 | 51 |
leukemia | 1.71e-19 | 39 |
myeloid leukemia | 1.01e-15 | 31 |
germ cell and embryonal cancer | 5.65e-07 | 22 |
germ cell cancer | 5.65e-07 | 22 |