FFCP PHASE1:Hg19::chr6:170863498..170863514,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6908 | |EntrezGene=6908 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11588 | |HGNC=11588 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=27bp_to_uc003qxt.2,uc003qxu.2,uc011ehf.1_5end | |association_with_transcript=27bp_to_uc003qxt.2,uc003qxu.2,uc011ehf.1_5end | ||
|cluster_id=chr6:170863498..170863514,+ | |||
|description=CAGE_peak_3_at_TBP_5end | |description=CAGE_peak_3_at_TBP_5end | ||
|id=chr6:170863498..170863514,+ | |id=chr6:170863498..170863514,+ | ||
|ontology_enrichment_celltype=CL:0000037!2.88e-14!172;CL:0000566!2.88e-14!172;CL:0000988!7.94e-14!182;CL:0002032!8.27e-13!165;CL:0000837!8.27e-13!165;CL:0000738!2.00e-08!140;CL:0000763!2.83e-08!112;CL:0000049!2.83e-08!112 | |ontology_enrichment_celltype=CL:0000037!2.88e-14!172;CL:0000566!2.88e-14!172;CL:0000988!7.94e-14!182;CL:0002032!8.27e-13!165;CL:0000837!8.27e-13!165;CL:0000738!2.00e-08!140;CL:0000763!2.83e-08!112;CL:0000049!2.83e-08!112 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,4.15e-14,177;CL:0000037,4.44e-14,168;CL:0002032,2.79e-12,161;CL:0000837,2.79e-12,161;CL:0000738,9.84e-09,136;CL:0000763,8.02e-08,108;CL:0000049,8.02e-08,108 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:162!1.03e-09!235;DOID:2531!1.25e-09!51;DOID:0060083!1.25e-09!51;DOID:1240!2.09e-09!39;DOID:14566!3.38e-09!239;DOID:8692!3.16e-08!31;DOID:0050686!6.32e-08!137 | |||
|ontology_enrichment_disease_v019=DOID:8692;4.60e-07;31 | |||
|ontology_enrichment_disease_v019_2=DOID:1240,3.35e-08,39;DOID:8692,7.58e-08,31;DOID:2531,1.48e-07,51;DOID:0060083,1.48e-07,51;DOID:162,3.87e-07,235 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2= | |||
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| ||
|short_description=p3@TBP | |short_description=p3@TBP | ||
}} | }} |
Latest revision as of 00:12, 17 September 2015
Short description: | p3@TBP |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_TBP_5end |
Coexpression cluster: | NA |
Association with transcript: | 27bp_to_uc003qxt.2, uc003qxu.2, uc011ehf.1_5end |
EntrezGene: | TBP |
HGNC: | 11588 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 4.15e-14 | 177 |
hematopoietic stem cell | 4.44e-14 | 168 |
hematopoietic oligopotent progenitor cell | 2.79e-12 | 161 |
hematopoietic multipotent progenitor cell | 2.79e-12 | 161 |
leukocyte | 9.84e-09 | 136 |
myeloid cell | 8.02e-08 | 108 |
common myeloid progenitor | 8.02e-08 | 108 |
Ontology term | p-value | n |
---|---|---|
leukemia | 3.35e-08 | 39 |
myeloid leukemia | 7.58e-08 | 31 |
hematologic cancer | 1.48e-07 | 51 |
immune system cancer | 1.48e-07 | 51 |
cancer | 3.87e-07 | 235 |