FFCP PHASE1:Hg19::chr6:160101566..160101580,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6648 | |EntrezGene=6648 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=11180 | |HGNC=11180 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-163bp_to_uc003qsf.3_5end | |association_with_transcript=-163bp_to_uc003qsf.3_5end | ||
|cluster_id=chr6:160101566..160101580,- | |||
|coexpression_cluster_id=C107 | |||
|description=CAGE_peak_26_at_SOD2_5end | |description=CAGE_peak_26_at_SOD2_5end | ||
|id=chr6:160101566..160101580,- | |id=chr6:160101566..160101580,- | ||
|ontology_enrichment_celltype=CL:0002057!4.38e-23!42;CL:0000860!1.81e-20!45;CL:0000766!3.05e-20!76;CL:0002194!2.92e-19!63;CL:0000576!2.92e-19!63;CL:0000040!2.92e-19!63;CL:0000559!2.92e-19!63;CL:0002009!4.76e-19!65;CL:0000557!9.74e-17!71;CL:0000839!2.23e-16!70;CL:0000763!9.59e-10!112;CL:0000049!9.59e-10!112;CL:0000738!6.08e-08!140;CL:0002087!9.81e-08!119;CL:0000048!3.18e-07!430;CL:0000723!7.50e-07!436;CL:0002031!9.33e-07!124 | |ontology_enrichment_celltype=CL:0002057!4.38e-23!42;CL:0000860!1.81e-20!45;CL:0000766!3.05e-20!76;CL:0002194!2.92e-19!63;CL:0000576!2.92e-19!63;CL:0000040!2.92e-19!63;CL:0000559!2.92e-19!63;CL:0002009!4.76e-19!65;CL:0000557!9.74e-17!71;CL:0000839!2.23e-16!70;CL:0000763!9.59e-10!112;CL:0000049!9.59e-10!112;CL:0000738!6.08e-08!140;CL:0002087!9.81e-08!119;CL:0000048!3.18e-07!430;CL:0000723!7.50e-07!436;CL:0002031!9.33e-07!124 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.77e-54;33!CL:0002057;4.77e-54;33!CL:0000473;6.57e-44;39!CL:0000234;6.57e-44;39!CL:0000576;2.57e-27;48!CL:0000766;1.70e-23;69!CL:0000763;1.94e-11;100!CL:0000775;2.50e-11;3!CL:0000094;9.00e-11;8!CL:0000771;8.00e-08;2!CL:0000081;9.90e-08;11!CL:0002087;1.14e-07;104!CL:0002561;1.37e-07;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.29e-54,42;CL:0002057,3.29e-54,42;CL:0000473,5.96e-54,48;CL:0000234,5.96e-54,48;CL:0000766,6.23e-47,72;CL:0002194,1.40e-41,59;CL:0000576,1.40e-41,59;CL:0000040,1.40e-41,59;CL:0000559,1.40e-41,59;CL:0002009,5.50e-40,61;CL:0000839,2.04e-36,66;CL:0000557,9.14e-36,67;CL:0000763,1.82e-28,108;CL:0000049,1.82e-28,108;CL:0000738,7.58e-21,136;CL:0002087,8.59e-18,115;CL:0002031,9.50e-17,120;CL:0002032,2.71e-16,161;CL:0000837,2.71e-16,161;CL:0000037,2.89e-15,168;CL:0000988,4.59e-14,177;CL:0000775,2.03e-11,3;CL:0000094,6.97e-11,8;CL:0000048,5.94e-10,427;CL:0000723,1.19e-09,433;CL:0000134,1.21e-09,354;CL:0000034,2.89e-09,441;CL:0002320,2.98e-09,361;CL:0000771,6.42e-08,2;CL:0000219,6.92e-08,386;CL:0000081,8.27e-08,11;CL:0002561,1.45e-07,2 | |||
|ontology_enrichment_development_v019=CL:0002057;9.24e-42;42!CL:0000049;1.45e-08;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002193!1.44e-15!112;UBERON:0002204!1.19e-14!167;UBERON:0002371!1.23e-14!80;UBERON:0002390!2.37e-14!102;UBERON:0003061!2.37e-14!102;UBERON:0001474!1.84e-13!86;UBERON:0002405!9.67e-13!115;UBERON:0004765!2.16e-12!101;UBERON:0001434!2.16e-12!101;UBERON:0000926!1.93e-07!448;UBERON:0004120!1.93e-07!448;UBERON:0006603!1.93e-07!448 | |||
|ontology_enrichment_uberon_v019=UBERON:0005933;1.37e-07;2!UBERON:0005942;1.37e-07;2!UBERON:0005932;1.37e-07;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,1.13e-30,76;UBERON:0002193,5.70e-28,108;UBERON:0001474,6.79e-28,82;UBERON:0002405,1.04e-27,93;UBERON:0002390,1.68e-27,98;UBERON:0003061,1.68e-27,98;UBERON:0001434,4.16e-25,100;UBERON:0004765,9.16e-25,90;UBERON:0002204,1.08e-18,167;UBERON:0003081,1.15e-14,203;UBERON:0000926,1.60e-09,315;UBERON:0004120,1.60e-09,315;UBERON:0006603,1.60e-09,315;UBERON:0002384,1.01e-08,371;UBERON:0005933,1.45e-07,2;UBERON:0005942,1.45e-07,2;UBERON:0005932,1.45e-07,2 | |||
|phase1_expression=0,0.642301571672949,0.140954404095971,0,0.446961094427288,0.872338524100369,0,0,0.522371256399677,0,0,0,0,0,0.331397375727916,1.34465029290355,1.80808358407193,0.730310090387373,0.975865597581014,0,0,0,0,0,0,0,0,0.0787107813136792,0,0,0.154816123316076,0,0,0,0,0.142169232487422,0,0,2.00544447470142,1.30206522429511,0.223915474239924,0,0.257575567634187,0.726991193897824,0,0.242584061187816,5.11343881192506,3.70051099219643,3.09706370895104,6.04154023876516,3.84241059793651,5.43909128743746,9.65287906062532,5.80936215225443,6.77132432971709,3.76484679085209,0.272906150057846,1.34834090667051,8.57034898638527,1.92557416245656,6.39337125799041,1.64925650093358,1.99463657621632,0.426224750532694,21.7656928971438,7.94339314567596,4.9825779919646,5.7787193009051,5.73631210262222,2.6062661364614,15.1349875658342,3.68277635987565,5.06339819905415,0,0,0.209658645508376,0,0.450530678524519,0,0.285012743741249,0.19891667719909,0.365328307529268,0,0,0,0,0,0,0,0,0,0.587237189370939,0,0,0.560508562981536,0,0,0.786021525498329,0,0,0,0,0,0,0,0.221533894583621,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.869079113764942,0,1.94653948121054,0,0,0,0.196468613246569,0,0,0,0,0.26591592103773,0.238490624305342,0,0,0,0,0,0,0,0,0,0.258416759169329,0,0.33472061276467,0,0,0.24406205754817,0,0,0.0892997282840798,0,0,0,0,0,2.63560834872127,3.87780264148325,0,0,0.12663051166458,0.662045904066094,0,0,0,0,0,0,0.134710672069688,0,0,0,0,0,0,0.298897361103602,0,0,0,0,0.245668634623536,0,0,0.989067717114227,0,0,0,0,0,0,0,0.45071417671979,0,0,0.213557388818567,0.211931901159562,0,0.206105058476878,0,0.18611685633159,0,0.0974370051611986,0,0.184099797284599,0,0,0,0,0,0,0,0,0,0,0.10366105501537,0,0,0,0,0,1.39310378409594,3.60939740834793,0.354920400119532,0,0,0.110293972732394,0,0,0.404493924480493,0,0,0,0,0,0,2.53510069643662,1.96565443335525,1.18157981336281,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0.866198686566443,3.70388410061289,3.42457474022277,0,0,0.246217006087397,0.234004265139238,0.445893486866185,0,0,0,0.0895585227028483,0,0,0,0,0.207328115540772,0,0,0.063497894292169,0,0,0,0,0,0.285826432630578,0,0,0.07333828582095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0.799783929456456,0,1.00451418286425,4.21667878966063,0,0,0,0.144781306667579,0.61642896765115,0.179060963239896,0.112085143993527,0.197030760201927,0.215627574859517,0.128343036279748,0,0,0,0,0.637938751653163,8.23907726341901,17.9496875522415,1.65766205374414,0.12269149171914,0,0,0.207970861530807,0.178428988797162,0.157702415033935,0,0,0,0,0.664225598535437,0,0.260650843404249,0,0,0,0.215714200818617,0.320182673410333,0,0,0,0,0.153461973288062,0,0.128139149255701,0,0,1.48418066444991,0,0,0,0,0,0,0,0.184161977871793,0,0.182091168006717,1.04899531967539,0,0.0770153371044148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915694648183434,0.082509499920588,0.574265537996172,0,1.6068392984416,0.290012154876366,0.154048617114644,0.15350367472613,0.275673144969061,0,0.145016693914229,0.170453254832202,0,0.165284915360978,0.192190067365106,0.127612712494584,0,0.929691098594572,0,0,0.308033580176089,0,0,0.18532421910392,0.143124886741991,0,0,0.38126038784765,0,0,0,0,0.179872457583315,0,0.117812402345686,0,0,0,0,1.70599442741899,0,0,0.141405431953713,0,0,1.32687795048244,0.438450885253763,0,0.655894752046633,0,0,0,0,0.0982490410131212,0,0,2.32218398827431,1.64647446479951,0,0,0,0,0,0.0941438007767792,0,0,0,0,1.01489521846434,0.764637207142375,1.13929437434833,0.476463550915578,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0.199579371432817,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.19538809540204,0,0,0,0,0,0,0,0,0,0,0.23874448473769,0,0,0,0.140669416410513,0.333926115068718,0,0.422250816255987,0,0.276283915531148,0,0,0.123084805461069,0,0,0.179021174675609,0,0.197286811273867,0,0,0,0.371072392647405,0,0,0,0,0,0,0,0,0,0,0,0.120596438625408,0,0,0.295547618953547,0,0,0,0,1.36730467016401,0,0.0897576444097721,0,0.31900115973192,0,0.533034776018635,0,0.156980256395025,0,0,0,0,0,0,0.421996129056054,0,0.141353071433941,0,0.995261931078505,0.0884575645033392,0,0.296521128680622,0.123563938946503,0,0.067401132980677,0,0,0,0,0,0.394584402849391,0,0,0.568679216656392,0,0.103688191397247,0,0,0,0,0,0,0,0,0.0870592065804026,0.34945333648406,0,0,0,0,0,0,0,0,0,0.126621591911757,0,0.0801588202515337,0,0,0,0,0.171594997861965,0.14405479798815,0,0,0,0,0,0.288950589901519,0,0,0,0,0,0.279282401272254,0,0.717873024576814,0.399358000997982,0,0,0.0671834724867263,0.360299883542404,0,0.0787831823072236,0,0,0,0,0,0,0,0,0,0.2249738915515,0,0.0607495566580247,0,0.788057072991982,0.0524545881349981,0,0,0,0,0,0,1.08599920350743,0.864221491201268,0,0,0,0,0,0.879313402068495,0,0.129282956361551,0.13223260174269,0,0,0.106787412567695,0,0.414239055347196,0,0,0,0,0,0.2506898940227,0.306345576763462,0.655745261419609,0,0,0,0,0,0.110929051536852,0,0,0,0,0,0,0,0,0,0.233713309847224,0,0.378806010550178,0,0.889811221596536,0.457680136793847,0.151230923763239,0,0.443565449968902,0.318593534327405,3.59842489730884,0,0,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| ||
|short_description=p26@SOD2 | |short_description=p26@SOD2 | ||
}} | }} |
Latest revision as of 14:09, 16 September 2015
Short description: | p26@SOD2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_26_at_SOD2_5end |
Coexpression cluster: | C107_Neutrophils_CD14_Eosinophils_Monocytederived_Whole_Peripheral_blood |
Association with transcript: | -163bp_to_uc003qsf.3_5end |
EntrezGene: | SOD2 |
HGNC: | 11180 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 1.13e-30 | 76 |
hemolymphoid system | 5.70e-28 | 108 |
bone element | 6.79e-28 | 82 |
immune system | 1.04e-27 | 93 |
hematopoietic system | 1.68e-27 | 98 |
blood island | 1.68e-27 | 98 |
skeletal system | 4.16e-25 | 100 |
skeletal element | 9.16e-25 | 90 |
musculoskeletal system | 1.08e-18 | 167 |
lateral plate mesoderm | 1.15e-14 | 203 |
mesoderm | 1.60e-09 | 315 |
mesoderm-derived structure | 1.60e-09 | 315 |
presumptive mesoderm | 1.60e-09 | 315 |
connective tissue | 1.01e-08 | 371 |
hair root sheath | 1.45e-07 | 2 |
hair outer root sheath | 1.45e-07 | 2 |
bulb of hair follicle | 1.45e-07 | 2 |