FFCP PHASE1:Hg19::chr20:19870167..19870225,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPJ1,A1A4T0,Q8WYP3 | |UniProt=E7EPJ1,A1A4T0,Q8WYP3 | ||
|association_with_transcript=0bp_to_ENST00000440354,ENST00000465815,NM_018993,uc002wro.1,uc010gcu.1_5end | |association_with_transcript=0bp_to_ENST00000440354,ENST00000465815,NM_018993,uc002wro.1,uc010gcu.1_5end | ||
|cluster_id=chr20:19870167..19870225,+ | |||
|description=CAGE_peak_10_at_RIN2_5end | |description=CAGE_peak_10_at_RIN2_5end | ||
|id=chr20:19870167..19870225,+ | |id=chr20:19870167..19870225,+ | ||
|ontology_enrichment_celltype=CL:0002139!1.17e-13!24;CL:0000115!2.12e-10!35;CL:0000071!3.02e-10!18;CL:0002546!3.02e-10!18;CL:0000222!1.79e-08!119;CL:0002078!2.47e-08!44;CL:0000213!3.24e-07!57;CL:0000215!3.24e-07!57;CL:1000413!6.64e-07!9 | |ontology_enrichment_celltype=CL:0002139!1.17e-13!24;CL:0000115!2.12e-10!35;CL:0000071!3.02e-10!18;CL:0002546!3.02e-10!18;CL:0000222!1.79e-08!119;CL:0002078!2.47e-08!44;CL:0000213!3.24e-07!57;CL:0000215!3.24e-07!57;CL:1000413!6.64e-07!9 | ||
|ontology_enrichment_celltype_v019=CL:0002139;4.61e-20;24!CL:0000071;3.42e-15;18!CL:0000115;4.41e-14;36!CL:1000413;2.27e-09;9!CL:0002078;2.68e-09;45!CL:0000213;2.87e-07;58!CL:0000215;2.87e-07;58!CL:0002544;7.20e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.49e-20,24;CL:0000115,3.28e-17,36;CL:0000071,2.63e-15,18;CL:0002546,2.63e-15,18;CL:0002078,3.09e-13,45;CL:0000213,9.60e-12,58;CL:0000215,9.60e-12,58;CL:1000413,9.14e-10,9;CL:0000222,1.12e-07,121;CL:0002544,3.95e-07,6;CL:0005020,8.06e-07,6;CL:0002138,8.06e-07,6;CL:0005022,8.06e-07,6 | |||
|ontology_enrichment_development_v019=CL:0002546;3.42e-15;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!2.86e-33!115;UBERON:0004111!5.21e-28!241;UBERON:0000477!1.16e-24!286;UBERON:0000025!1.26e-23!194;UBERON:0000055!1.81e-19!69;UBERON:0004872!9.76e-19!84;UBERON:0000119!3.65e-18!312;UBERON:0002049!6.65e-18!79;UBERON:0007798!6.65e-18!79;UBERON:0000483!1.62e-17!309;UBERON:0001981!2.31e-17!60;UBERON:0007500!2.31e-17!60;UBERON:0004537!2.31e-17!60;UBERON:0006965!2.31e-17!60;UBERON:0001009!2.84e-14!113;UBERON:0000468!5.78e-14!659;UBERON:0004535!1.47e-13!110;UBERON:0000467!2.33e-13!625;UBERON:0000480!3.49e-13!626;UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0003914!4.86e-13!118;UBERON:0001637!1.92e-12!42;UBERON:0003509!1.92e-12!42;UBERON:0004572!1.92e-12!42;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0000475!5.58e-12!365;UBERON:0003080!1.20e-11!42;UBERON:0002346!2.03e-11!90;UBERON:0002780!3.67e-11!41;UBERON:0001890!3.67e-11!41;UBERON:0006240!3.67e-11!41;UBERON:0002616!6.34e-11!59;UBERON:0000481!1.05e-10!347;UBERON:0001986!3.02e-10!18;UBERON:0004638!3.02e-10!18;UBERON:0004852!3.02e-10!18;UBERON:0004573!3.03e-10!33;UBERON:0004571!3.03e-10!33;UBERON:0000947!4.65e-10!21;UBERON:0010191!4.65e-10!21;UBERON:0002050!7.30e-10!605;UBERON:0005423!7.30e-10!605;UBERON:0000923!1.26e-09!604;UBERON:0005291!1.26e-09!604;UBERON:0006598!1.26e-09!604;UBERON:0002532!1.26e-09!604;UBERON:0000922!1.33e-09!612;UBERON:0000487!1.34e-09!22;UBERON:0000955!1.70e-09!69;UBERON:0006238!1.70e-09!69;UBERON:0002020!4.07e-09!34;UBERON:0003528!4.07e-09!34;UBERON:0003056!5.18e-09!61;UBERON:0001893!9.94e-09!34;UBERON:0001017!1.22e-08!82;UBERON:0002791!1.72e-08!33;UBERON:0005743!1.81e-08!86;UBERON:0001869!3.36e-08!32;UBERON:0006914!3.75e-08!25;UBERON:0000490!4.00e-08!138;UBERON:0000073!3.19e-07!94;UBERON:0001016!3.19e-07!94;UBERON:0000153!3.60e-07!129;UBERON:0007811!3.60e-07!129;UBERON:0002619!4.18e-07!22;UBERON:0000033!4.34e-07!123;UBERON:0003915!6.64e-07!9;UBERON:0004700!6.64e-07!9;UBERON:0001917!6.64e-07!9;UBERON:0002323!9.73e-07!46 | |ontology_enrichment_uberon=UBERON:0007023!2.86e-33!115;UBERON:0004111!5.21e-28!241;UBERON:0000477!1.16e-24!286;UBERON:0000025!1.26e-23!194;UBERON:0000055!1.81e-19!69;UBERON:0004872!9.76e-19!84;UBERON:0000119!3.65e-18!312;UBERON:0002049!6.65e-18!79;UBERON:0007798!6.65e-18!79;UBERON:0000483!1.62e-17!309;UBERON:0001981!2.31e-17!60;UBERON:0007500!2.31e-17!60;UBERON:0004537!2.31e-17!60;UBERON:0006965!2.31e-17!60;UBERON:0001009!2.84e-14!113;UBERON:0000468!5.78e-14!659;UBERON:0004535!1.47e-13!110;UBERON:0000467!2.33e-13!625;UBERON:0000480!3.49e-13!626;UBERON:0001049!4.78e-13!57;UBERON:0005068!4.78e-13!57;UBERON:0006241!4.78e-13!57;UBERON:0007135!4.78e-13!57;UBERON:0003914!4.86e-13!118;UBERON:0001637!1.92e-12!42;UBERON:0003509!1.92e-12!42;UBERON:0004572!1.92e-12!42;UBERON:0003075!4.41e-12!86;UBERON:0007284!4.41e-12!86;UBERON:0000475!5.58e-12!365;UBERON:0003080!1.20e-11!42;UBERON:0002346!2.03e-11!90;UBERON:0002780!3.67e-11!41;UBERON:0001890!3.67e-11!41;UBERON:0006240!3.67e-11!41;UBERON:0002616!6.34e-11!59;UBERON:0000481!1.05e-10!347;UBERON:0001986!3.02e-10!18;UBERON:0004638!3.02e-10!18;UBERON:0004852!3.02e-10!18;UBERON:0004573!3.03e-10!33;UBERON:0004571!3.03e-10!33;UBERON:0000947!4.65e-10!21;UBERON:0010191!4.65e-10!21;UBERON:0002050!7.30e-10!605;UBERON:0005423!7.30e-10!605;UBERON:0000923!1.26e-09!604;UBERON:0005291!1.26e-09!604;UBERON:0006598!1.26e-09!604;UBERON:0002532!1.26e-09!604;UBERON:0000922!1.33e-09!612;UBERON:0000487!1.34e-09!22;UBERON:0000955!1.70e-09!69;UBERON:0006238!1.70e-09!69;UBERON:0002020!4.07e-09!34;UBERON:0003528!4.07e-09!34;UBERON:0003056!5.18e-09!61;UBERON:0001893!9.94e-09!34;UBERON:0001017!1.22e-08!82;UBERON:0002791!1.72e-08!33;UBERON:0005743!1.81e-08!86;UBERON:0001869!3.36e-08!32;UBERON:0006914!3.75e-08!25;UBERON:0000490!4.00e-08!138;UBERON:0000073!3.19e-07!94;UBERON:0001016!3.19e-07!94;UBERON:0000153!3.60e-07!129;UBERON:0007811!3.60e-07!129;UBERON:0002619!4.18e-07!22;UBERON:0000033!4.34e-07!123;UBERON:0003915!6.64e-07!9;UBERON:0004700!6.64e-07!9;UBERON:0001917!6.64e-07!9;UBERON:0002323!9.73e-07!46 | ||
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| ||
|short_description=p10@RIN2 | |short_description=p10@RIN2 | ||
}} | }} |
Latest revision as of 16:10, 24 September 2015
Short description: | p10@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_10_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000440354, ENST00000465815, NM_018993, uc002wro.1, uc010gcu.1_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | E7EPJ1A1A4T0Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.49e-20 | 24 |
endothelial cell | 3.28e-17 | 36 |
blood vessel endothelial cell | 2.63e-15 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.63e-15 | 18 |
meso-epithelial cell | 3.09e-13 | 45 |
lining cell | 9.60e-12 | 58 |
barrier cell | 9.60e-12 | 58 |
endothelial cell of artery | 9.14e-10 | 9 |
mesodermal cell | 1.12e-07 | 121 |
aortic endothelial cell | 3.95e-07 | 6 |
lymphangioblast | 8.06e-07 | 6 |
endothelial cell of lymphatic vessel | 8.06e-07 | 6 |
vascular lymphangioblast | 8.06e-07 | 6 |