FFCP PHASE1:Hg19::chr20:19866814..19866842,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=54453 | |EntrezGene=54453 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=18750 | |HGNC=18750 | ||
|TSSclassifier=strong | |||
|UniProt=Q8WYP3 | |UniProt=Q8WYP3 | ||
|association_with_transcript=-322bp_to_ENST00000255006,NM_001242581_5end | |association_with_transcript=-322bp_to_ENST00000255006,NM_001242581_5end | ||
|cluster_id=chr20:19866814..19866842,+ | |||
|description=CAGE_peak_9_at_RIN2_5end | |description=CAGE_peak_9_at_RIN2_5end | ||
|id=chr20:19866814..19866842,+ | |id=chr20:19866814..19866842,+ | ||
|ontology_enrichment_celltype=CL:0002139!5.71e-19!24;CL:0000071!3.62e-15!18;CL:0002546!3.62e-15!18;CL:0000115!1.11e-13!35;CL:0002078!1.10e-09!44;CL:1000413!4.41e-09!9;CL:0000359!2.87e-08!32;CL:0000192!8.24e-08!42;CL:0000514!8.24e-08!42;CL:0000222!1.45e-07!119 | |ontology_enrichment_celltype=CL:0002139!5.71e-19!24;CL:0000071!3.62e-15!18;CL:0002546!3.62e-15!18;CL:0000115!1.11e-13!35;CL:0002078!1.10e-09!44;CL:1000413!4.41e-09!9;CL:0000359!2.87e-08!32;CL:0000192!8.24e-08!42;CL:0000514!8.24e-08!42;CL:0000222!1.45e-07!119 | ||
|ontology_enrichment_celltype_v019=CL:0002139;6.18e-22;24!CL:0000071;2.93e-21;18!CL:0000115;5.74e-16;36!CL:1000413;1.30e-14;9!CL:0000359;3.32e-10;32!CL:0002544;5.02e-10;6!CL:0002078;3.29e-09;45!CL:0002543;3.80e-07;6!CL:0002594;7.60e-07;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,3.64e-22,24;CL:0000071,1.73e-21,18;CL:0002546,1.73e-21,18;CL:0000115,3.22e-18,36;CL:1000413,6.40e-15,9;CL:0002078,3.23e-13,45;CL:0000222,5.79e-11,121;CL:0000359,2.75e-10,32;CL:0002544,3.34e-10,6;CL:0000213,7.63e-09,58;CL:0000215,7.63e-09,58;CL:0000192,2.00e-07,43;CL:0000514,2.00e-07,43;CL:0002543,4.06e-07,6;CL:0002594,8.33e-07,4 | |||
|ontology_enrichment_development_v019=CL:0002546;2.93e-21;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:2394;2.62e-08;14 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,1.88e-08,14 | |||
|ontology_enrichment_uberon=UBERON:0004111!6.88e-36!241;UBERON:0000025!9.93e-31!194;UBERON:0000477!1.60e-29!286;UBERON:0000483!3.41e-26!309;UBERON:0000119!5.70e-26!312;UBERON:0000055!1.01e-24!69;UBERON:0002049!2.61e-23!79;UBERON:0007798!2.61e-23!79;UBERON:0001981!5.10e-23!60;UBERON:0007500!5.10e-23!60;UBERON:0004537!5.10e-23!60;UBERON:0006965!5.10e-23!60;UBERON:0007023!5.80e-19!115;UBERON:0001637!1.16e-17!42;UBERON:0003509!1.16e-17!42;UBERON:0004572!1.16e-17!42;UBERON:0001049!2.84e-17!57;UBERON:0005068!2.84e-17!57;UBERON:0006241!2.84e-17!57;UBERON:0007135!2.84e-17!57;UBERON:0003075!5.09e-16!86;UBERON:0007284!5.09e-16!86;UBERON:0003914!8.85e-16!118;UBERON:0001986!3.62e-15!18;UBERON:0004638!3.62e-15!18;UBERON:0004852!3.62e-15!18;UBERON:0001009!9.36e-15!113;UBERON:0004872!9.95e-15!84;UBERON:0000490!1.71e-14!138;UBERON:0002346!1.79e-14!90;UBERON:0000467!3.33e-14!625;UBERON:0000480!4.51e-14!626;UBERON:0004573!5.45e-14!33;UBERON:0004571!5.45e-14!33;UBERON:0004535!7.35e-14!110;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0003080!4.17e-13!42;UBERON:0002616!5.38e-13!59;UBERON:0000487!2.61e-12!22;UBERON:0003056!4.64e-12!61;UBERON:0001893!4.87e-12!34;UBERON:0002020!9.02e-12!34;UBERON:0003528!9.02e-12!34;UBERON:0000481!1.05e-11!347;UBERON:0000475!1.52e-11!365;UBERON:0002791!1.59e-11!33;UBERON:0000955!2.68e-11!69;UBERON:0006238!2.68e-11!69;UBERON:0001017!3.10e-11!82;UBERON:0000468!3.58e-11!659;UBERON:0001869!6.47e-11!32;UBERON:0005743!7.47e-11!86;UBERON:0000923!8.89e-11!604;UBERON:0005291!8.89e-11!604;UBERON:0006598!8.89e-11!604;UBERON:0002532!8.89e-11!604;UBERON:0002050!1.16e-10!605;UBERON:0005423!1.16e-10!605;UBERON:0000922!2.45e-10!612;UBERON:0002619!2.94e-10!22;UBERON:0006914!5.87e-10!25;UBERON:0000033!1.58e-09!123;UBERON:0001950!2.27e-09!20;UBERON:0000947!2.90e-09!21;UBERON:0010191!2.90e-09!21;UBERON:0003915!4.41e-09!9;UBERON:0004700!4.41e-09!9;UBERON:0001917!4.41e-09!9;UBERON:0000073!1.90e-08!94;UBERON:0001016!1.90e-08!94;UBERON:0000956!2.62e-08!25;UBERON:0000203!2.62e-08!25;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129 | |ontology_enrichment_uberon=UBERON:0004111!6.88e-36!241;UBERON:0000025!9.93e-31!194;UBERON:0000477!1.60e-29!286;UBERON:0000483!3.41e-26!309;UBERON:0000119!5.70e-26!312;UBERON:0000055!1.01e-24!69;UBERON:0002049!2.61e-23!79;UBERON:0007798!2.61e-23!79;UBERON:0001981!5.10e-23!60;UBERON:0007500!5.10e-23!60;UBERON:0004537!5.10e-23!60;UBERON:0006965!5.10e-23!60;UBERON:0007023!5.80e-19!115;UBERON:0001637!1.16e-17!42;UBERON:0003509!1.16e-17!42;UBERON:0004572!1.16e-17!42;UBERON:0001049!2.84e-17!57;UBERON:0005068!2.84e-17!57;UBERON:0006241!2.84e-17!57;UBERON:0007135!2.84e-17!57;UBERON:0003075!5.09e-16!86;UBERON:0007284!5.09e-16!86;UBERON:0003914!8.85e-16!118;UBERON:0001986!3.62e-15!18;UBERON:0004638!3.62e-15!18;UBERON:0004852!3.62e-15!18;UBERON:0001009!9.36e-15!113;UBERON:0004872!9.95e-15!84;UBERON:0000490!1.71e-14!138;UBERON:0002346!1.79e-14!90;UBERON:0000467!3.33e-14!625;UBERON:0000480!4.51e-14!626;UBERON:0004573!5.45e-14!33;UBERON:0004571!5.45e-14!33;UBERON:0004535!7.35e-14!110;UBERON:0002780!1.07e-13!41;UBERON:0001890!1.07e-13!41;UBERON:0006240!1.07e-13!41;UBERON:0003080!4.17e-13!42;UBERON:0002616!5.38e-13!59;UBERON:0000487!2.61e-12!22;UBERON:0003056!4.64e-12!61;UBERON:0001893!4.87e-12!34;UBERON:0002020!9.02e-12!34;UBERON:0003528!9.02e-12!34;UBERON:0000481!1.05e-11!347;UBERON:0000475!1.52e-11!365;UBERON:0002791!1.59e-11!33;UBERON:0000955!2.68e-11!69;UBERON:0006238!2.68e-11!69;UBERON:0001017!3.10e-11!82;UBERON:0000468!3.58e-11!659;UBERON:0001869!6.47e-11!32;UBERON:0005743!7.47e-11!86;UBERON:0000923!8.89e-11!604;UBERON:0005291!8.89e-11!604;UBERON:0006598!8.89e-11!604;UBERON:0002532!8.89e-11!604;UBERON:0002050!1.16e-10!605;UBERON:0005423!1.16e-10!605;UBERON:0000922!2.45e-10!612;UBERON:0002619!2.94e-10!22;UBERON:0006914!5.87e-10!25;UBERON:0000033!1.58e-09!123;UBERON:0001950!2.27e-09!20;UBERON:0000947!2.90e-09!21;UBERON:0010191!2.90e-09!21;UBERON:0003915!4.41e-09!9;UBERON:0004700!4.41e-09!9;UBERON:0001917!4.41e-09!9;UBERON:0000073!1.90e-08!94;UBERON:0001016!1.90e-08!94;UBERON:0000956!2.62e-08!25;UBERON:0000203!2.62e-08!25;UBERON:0000153!2.73e-08!129;UBERON:0007811!2.73e-08!129 | ||
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| ||
|short_description=p9@RIN2 | |short_description=p9@RIN2 | ||
}} | }} |
Latest revision as of 16:00, 24 September 2015
Short description: | p9@RIN2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_RIN2_5end |
Coexpression cluster: | NA |
Association with transcript: | -322bp_to_ENST00000255006, NM_001242581_5end |
EntrezGene: | RIN2 |
HGNC: | 18750 |
UniProt: | Q8WYP3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 3.64e-22 | 24 |
blood vessel endothelial cell | 1.73e-21 | 18 |
embryonic blood vessel endothelial progenitor cell | 1.73e-21 | 18 |
endothelial cell | 3.22e-18 | 36 |
endothelial cell of artery | 6.40e-15 | 9 |
meso-epithelial cell | 3.23e-13 | 45 |
mesodermal cell | 5.79e-11 | 121 |
vascular associated smooth muscle cell | 2.75e-10 | 32 |
aortic endothelial cell | 3.34e-10 | 6 |
lining cell | 7.63e-09 | 58 |
barrier cell | 7.63e-09 | 58 |
smooth muscle cell | 2.00e-07 | 43 |
smooth muscle myoblast | 2.00e-07 | 43 |
vein endothelial cell | 4.06e-07 | 6 |
smooth muscle cell of the umbilical artery | 8.33e-07 | 4 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 1.88e-08 | 14 |