FFCP PHASE1:Hg19::chr20:10400351..10400358,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr20:10400351..10400358,- | |||
|coexpression_cluster_id=C619 | |||
|description=CAGE_peak_at_chr20:10400351..10400358,- | |description=CAGE_peak_at_chr20:10400351..10400358,- | ||
|id=chr20:10400351..10400358,- | |id=chr20:10400351..10400358,- | ||
|ontology_enrichment_celltype=CL:0002368!7.03e-20!13;CL:0000066!1.87e-16!254;CL:0002076!5.02e-16!43;CL:0000223!1.21e-12!59;CL:0002327!3.14e-10!4;CL:0002202!5.73e-08!9;CL:0002632!5.73e-08!9;CL:0002159!1.22e-07!13;CL:0000068!6.29e-07!3;CL:0000069!6.29e-07!3;CL:0000307!6.29e-07!3;CL:0000377!6.29e-07!3 | |ontology_enrichment_celltype=CL:0002368!7.03e-20!13;CL:0000066!1.87e-16!254;CL:0002076!5.02e-16!43;CL:0000223!1.21e-12!59;CL:0002327!3.14e-10!4;CL:0002202!5.73e-08!9;CL:0002632!5.73e-08!9;CL:0002159!1.22e-07!13;CL:0000068!6.29e-07!3;CL:0000069!6.29e-07!3;CL:0000307!6.29e-07!3;CL:0000377!6.29e-07!3 | ||
|ontology_enrichment_celltype_v019=CL:0002368;2.82e-20;13!CL:0002202;1.58e-13;9!CL:0002632;1.58e-13;9!CL:0002328;9.90e-11;3!CL:0000307;9.90e-11;3!CL:0002178;9.90e-11;3!CL:0002076;1.12e-08;42!CL:0002327;2.26e-08;4!CL:0000082;5.83e-07;19 | |||
|ontology_enrichment_celltype_v019_2=CL:0002368,2.64e-20,13;CL:0002202,1.49e-13,9;CL:0002632,1.49e-13,9;CL:0002076,2.90e-11,42;CL:0002328,8.17e-11,3;CL:0000068,1.09e-10,3;CL:0000069,1.09e-10,3;CL:0000307,1.09e-10,3;CL:0000377,1.09e-10,3;CL:0002178,1.20e-10,3;CL:0002327,2.26e-08,4;CL:0000223,2.77e-08,58;CL:0000082,5.50e-07,19 | |||
|ontology_enrichment_development_v019=CL:0000377;9.90e-11;3 | |||
|ontology_enrichment_disease=DOID:1749!2.11e-10!14;DOID:305!2.18e-07!106 | |ontology_enrichment_disease=DOID:1749!2.11e-10!14;DOID:305!2.18e-07!106 | ||
|ontology_enrichment_disease_v019=DOID:3493;2.05e-15;2 | |||
|ontology_enrichment_disease_v019_2=DOID:3493,2.74e-15,2 | |||
|ontology_enrichment_uberon=UBERON:0004119!1.86e-11!169;UBERON:0000925!1.86e-11!169;UBERON:0006595!1.86e-11!169;UBERON:0001264!1.23e-10!10;UBERON:0003922!1.23e-10!10;UBERON:0003923!1.23e-10!10;UBERON:0003924!1.23e-10!10;UBERON:0003921!1.23e-10!10;UBERON:0001911!3.14e-10!4;UBERON:0005333!3.14e-10!4;UBERON:0008425!3.14e-10!4;UBERON:0005311!3.14e-10!4;UBERON:0001045!1.23e-09!11;UBERON:0000344!3.32e-08!12;UBERON:0002114!4.20e-08!12;UBERON:0002075!6.99e-08!18;UBERON:0003729!8.63e-08!5;UBERON:0000365!9.05e-08!5;UBERON:0001004!4.28e-07!72;UBERON:0002108!5.63e-07!14;UBERON:0001007!7.06e-07!155;UBERON:0001555!7.06e-07!155;UBERON:0007026!7.06e-07!155 | |ontology_enrichment_uberon=UBERON:0004119!1.86e-11!169;UBERON:0000925!1.86e-11!169;UBERON:0006595!1.86e-11!169;UBERON:0001264!1.23e-10!10;UBERON:0003922!1.23e-10!10;UBERON:0003923!1.23e-10!10;UBERON:0003924!1.23e-10!10;UBERON:0003921!1.23e-10!10;UBERON:0001911!3.14e-10!4;UBERON:0005333!3.14e-10!4;UBERON:0008425!3.14e-10!4;UBERON:0005311!3.14e-10!4;UBERON:0001045!1.23e-09!11;UBERON:0000344!3.32e-08!12;UBERON:0002114!4.20e-08!12;UBERON:0002075!6.99e-08!18;UBERON:0003729!8.63e-08!5;UBERON:0000365!9.05e-08!5;UBERON:0001004!4.28e-07!72;UBERON:0002108!5.63e-07!14;UBERON:0001007!7.06e-07!155;UBERON:0001555!7.06e-07!155;UBERON:0007026!7.06e-07!155 | ||
|ontology_enrichment_uberon_v019=UBERON:0004815;9.90e-11;3!UBERON:0002031;9.90e-11;3!UBERON:0000065;4.50e-09;44!UBERON:0007196;1.65e-08;15!UBERON:0001558;1.65e-08;15!UBERON:0001911;2.26e-08;4!UBERON:0005178;2.54e-08;34!UBERON:0002224;2.54e-08;34!UBERON:0005181;4.76e-08;35!UBERON:0000072;7.17e-08;37!UBERON:0004802;5.83e-07;19!UBERON:0000115;5.83e-07;19!UBERON:0000945;6.04e-07;5!UBERON:0010039;6.04e-07;5!UBERON:0002185;6.04e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004815,8.17e-11,3;UBERON:0002031,8.17e-11,3;UBERON:0000065,6.41e-09,54;UBERON:0007196,1.59e-08,15;UBERON:0001558,1.59e-08,15;UBERON:0001911,2.26e-08,4;UBERON:0005333,2.26e-08,4;UBERON:0008425,2.26e-08,4;UBERON:0005311,2.26e-08,4;UBERON:0005178,3.16e-08,34;UBERON:0002224,3.16e-08,34;UBERON:0005181,5.20e-08,35;UBERON:0005153,1.27e-07,37;UBERON:0008947,1.99e-07,38;UBERON:0003258,1.99e-07,38;UBERON:0002185,5.38e-07,5;UBERON:0004802,5.50e-07,19;UBERON:0000115,5.50e-07,19 | |||
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| ||
|short_description=p@chr20:10400351..10400358,- | |short_description=p@chr20:10400351..10400358,- | ||
}} | }} |
Latest revision as of 11:51, 28 July 2015
Short description: | p@chr20:10400351..10400358, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr20:10400351..10400358, - |
Coexpression cluster: | C619_squamous_bile_Small_Mammary_mucinous_Tracheal_giant |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
respiratory epithelial cell | 2.64e-20 | 13 |
epithelial cell of tracheobronchial tree | 1.49e-13 | 9 |
epithelial cell of lower respiratory tract | 1.49e-13 | 9 |
endo-epithelial cell | 2.90e-11 | 42 |
bronchial epithelial cell | 8.17e-11 | 3 |
duct epithelial cell | 1.09e-10 | 3 |
branched duct epithelial cell | 1.09e-10 | 3 |
tracheal epithelial cell | 1.09e-10 | 3 |
tracheoblast | 1.09e-10 | 3 |
epithelial cell of stomach | 1.20e-10 | 3 |
mammary gland epithelial cell | 2.26e-08 | 4 |
endodermal cell | 2.77e-08 | 58 |
epithelial cell of lung | 5.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
lower respiratory tract epithelium | 8.17e-11 | 3 |
epithelium of bronchus | 8.17e-11 | 3 |
respiratory tract | 6.41e-09 | 54 |
tracheobronchial tree | 1.59e-08 | 15 |
lower respiratory tract | 1.59e-08 | 15 |
mammary gland | 2.26e-08 | 4 |
mammary bud | 2.26e-08 | 4 |
mammary ridge | 2.26e-08 | 4 |
mammary placode | 2.26e-08 | 4 |
thoracic cavity element | 3.16e-08 | 34 |
thoracic cavity | 3.16e-08 | 34 |
thoracic segment organ | 5.20e-08 | 35 |
epithelial bud | 1.27e-07 | 37 |
respiratory primordium | 1.99e-07 | 38 |
endoderm of foregut | 1.99e-07 | 38 |
bronchus | 5.38e-07 | 5 |
respiratory tract epithelium | 5.50e-07 | 19 |
lung epithelium | 5.50e-07 | 19 |
Ontology term | p-value | n |
---|---|---|
signet ring cell adenocarcinoma | 2.74e-15 | 2 |