FFCP PHASE1:Hg19::chr6:136358786..136358809,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=27115 | |EntrezGene=27115 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=8792 | |HGNC=8792 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-364bp_to_uc003qgr.2_5end | |association_with_transcript=-364bp_to_uc003qgr.2_5end | ||
|cluster_id=chr6:136358786..136358809,+ | |||
|coexpression_cluster_id=C328 | |||
|description=CAGE_peak_12_at_PDE7B_5end | |description=CAGE_peak_12_at_PDE7B_5end | ||
|id=chr6:136358786..136358809,+ | |id=chr6:136358786..136358809,+ | ||
|ontology_enrichment_celltype=CL:0002139!4.66e-14!24;CL:0000071!2.00e-11!18;CL:0002546!2.00e-11!18;CL:0000115!2.11e-10!35;CL:1000413!1.80e-09!9;CL:0002078!7.18e-08!44;CL:0002543!9.89e-07!6 | |ontology_enrichment_celltype=CL:0002139!4.66e-14!24;CL:0000071!2.00e-11!18;CL:0002546!2.00e-11!18;CL:0000115!2.11e-10!35;CL:1000413!1.80e-09!9;CL:0002078!7.18e-08!44;CL:0002543!9.89e-07!6 | ||
|ontology_enrichment_celltype_v019=CL:0002139;1.06e-40;24!CL:0000071;1.97e-33;18!CL:0000115;5.70e-33;36!CL:0002543;2.33e-22;6!CL:0002544;7.91e-22;6!CL:1000413;2.01e-20;9!CL:0002078;2.56e-20;45!CL:0002618;1.13e-16;3!CL:0000213;9.74e-16;58!CL:0000215;9.74e-16;58!CL:0002549;1.38e-11;2!CL:0002138;5.65e-09;6!CL:0002548;2.56e-08;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0002139,1.34e-40,24;CL:0000115,1.46e-38,36;CL:0000071,2.49e-33,18;CL:0002546,2.49e-33,18;CL:0002078,4.42e-30,45;CL:0002543,1.48e-22,6;CL:0000213,1.77e-22,58;CL:0000215,1.77e-22,58;CL:0002544,1.85e-21,6;CL:1000413,3.67e-20,9;CL:0002618,6.51e-17,3;CL:0002549,1.67e-11,2;CL:0000222,2.27e-11,121;CL:0005020,5.67e-09,6;CL:0002138,5.67e-09,6;CL:0005022,5.67e-09,6;CL:0002548,2.81e-08,6;CL:0000076,5.41e-08,63 | |||
|ontology_enrichment_development_v019=CL:0002546;1.97e-33;18!CL:0005022;5.65e-09;6 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!1.63e-23!79;UBERON:0007798!1.63e-23!79;UBERON:0001009!2.19e-23!113;UBERON:0004535!2.55e-22!110;UBERON:0000477!1.97e-17!286;UBERON:0004872!3.12e-17!84;UBERON:0000055!8.93e-17!69;UBERON:0001981!1.67e-15!60;UBERON:0007500!1.67e-15!60;UBERON:0004537!1.67e-15!60;UBERON:0006965!1.67e-15!60;UBERON:0000025!5.41e-15!194;UBERON:0000119!6.97e-14!312;UBERON:0003914!1.46e-13!118;UBERON:0004111!2.98e-13!241;UBERON:0001637!4.70e-13!42;UBERON:0003509!4.70e-13!42;UBERON:0004572!4.70e-13!42;UBERON:0007023!1.72e-12!115;UBERON:0000483!1.86e-12!309;UBERON:0001986!2.00e-11!18;UBERON:0004638!2.00e-11!18;UBERON:0004852!2.00e-11!18;UBERON:0004573!4.12e-11!33;UBERON:0004571!4.12e-11!33;UBERON:0000947!1.28e-09!21;UBERON:0010191!1.28e-09!21;UBERON:0003915!1.80e-09!9;UBERON:0004700!1.80e-09!9;UBERON:0001917!1.80e-09!9;UBERON:0003075!1.08e-08!86;UBERON:0007284!1.08e-08!86;UBERON:0000487!1.37e-08!22;UBERON:0007100!2.29e-08!27;UBERON:0002200!2.38e-08!11;UBERON:0006876!2.38e-08!11;UBERON:0006914!3.67e-08!25;UBERON:0002346!6.89e-08!90;UBERON:0002616!1.17e-07!59;UBERON:0000467!1.38e-07!625;UBERON:0000480!1.62e-07!626;UBERON:0000948!2.20e-07!24;UBERON:0005498!2.20e-07!24;UBERON:0004140!2.20e-07!24;UBERON:0009881!2.20e-07!24;UBERON:0004141!2.20e-07!24;UBERON:0003084!2.20e-07!24;UBERON:0007005!2.20e-07!24;UBERON:0004139!2.20e-07!24;UBERON:0004291!2.20e-07!24;UBERON:0000490!4.76e-07!138;UBERON:0000033!5.34e-07!123;UBERON:0005284!5.98e-07!5;UBERON:0000073!9.67e-07!94;UBERON:0001016!9.67e-07!94 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;1.97e-33;18!UBERON:0001986;1.97e-33;18!UBERON:0004852;1.97e-33;18!UBERON:0000487;5.87e-27;22!UBERON:0006914;1.84e-23;25!UBERON:0003915;2.01e-20;9!UBERON:0004700;2.01e-20;9!UBERON:0001917;2.01e-20;9!UBERON:0000490;3.10e-19;33!UBERON:0001638;7.84e-15;9!UBERON:0003920;7.84e-15;9!UBERON:0004582;7.84e-15;9!UBERON:0001009;8.86e-14;112!UBERON:0004535;5.74e-12;109!UBERON:0002049;8.50e-12;75!UBERON:0007798;8.50e-12;75!UBERON:0005629;1.38e-11;2!UBERON:0005358;1.38e-11;2!UBERON:0001886;1.38e-11;2!UBERON:0004086;1.38e-11;2!UBERON:0005282;1.38e-11;2!UBERON:0005281;1.38e-11;2!UBERON:0002081;1.80e-11;2!UBERON:0000055;1.69e-10;65!UBERON:0002066;3.36e-10;5!UBERON:0007500;7.44e-10;56!UBERON:0001981;7.44e-10;56!UBERON:0004537;7.44e-10;56!UBERON:0000947;2.02e-08;21!UBERON:0010191;2.02e-08;21!UBERON:0004151;6.31e-08;3!UBERON:0000948;6.44e-08;22!UBERON:0006876;1.09e-07;11!UBERON:0007100;6.76e-07;25!UBERON:0004573;6.92e-07;33!UBERON:0004571;6.92e-07;33!UBERON:0001473;7.99e-07;8!UBERON:0004536;7.99e-07;8!UBERON:0006558;7.99e-07;8!UBERON:0002134;9.39e-07;1!UBERON:0005208;9.39e-07;1!UBERON:0004145;9.39e-07;1!UBERON:0005946;9.39e-07;1!UBERON:0005965;9.39e-07;1!UBERON:0002078;9.39e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.49e-33,18;UBERON:0001986,2.49e-33,18;UBERON:0004852,2.49e-33,18;UBERON:0004535,3.81e-29,109;UBERON:0001009,3.30e-28,112;UBERON:0002049,1.17e-27,78;UBERON:0007798,1.17e-27,78;UBERON:0000487,7.10e-27,22;UBERON:0006914,2.17e-23,25;UBERON:0000055,3.59e-21,68;UBERON:0004872,1.39e-20,83;UBERON:0003915,3.67e-20,9;UBERON:0004700,3.67e-20,9;UBERON:0001917,3.67e-20,9;UBERON:0003914,3.21e-18,117;UBERON:0007500,1.07e-16,59;UBERON:0001981,1.07e-16,59;UBERON:0004537,1.07e-16,59;UBERON:0006965,1.07e-16,59;UBERON:0001638,5.83e-15,9;UBERON:0003920,5.83e-15,9;UBERON:0004582,5.83e-15,9;UBERON:0002081,1.09e-11,2;UBERON:0010227,1.09e-11,2;UBERON:0005629,1.67e-11,2;UBERON:0005358,1.67e-11,2;UBERON:0001886,1.67e-11,2;UBERON:0004086,1.67e-11,2;UBERON:0005282,1.67e-11,2;UBERON:0005281,1.67e-11,2;UBERON:0002066,2.43e-10,5;UBERON:0000025,4.48e-09,192;UBERON:0004111,5.78e-09,240;UBERON:0000947,2.65e-08,21;UBERON:0010191,2.65e-08,21;UBERON:0004151,4.54e-08,3;UBERON:0000119,7.71e-08,309;UBERON:0006876,1.42e-07,11;UBERON:0003081,2.00e-07,203;UBERON:0000948,3.15e-07,24;UBERON:0005498,3.15e-07,24;UBERON:0004140,3.15e-07,24;UBERON:0009881,3.15e-07,24;UBERON:0004141,3.15e-07,24;UBERON:0003084,3.15e-07,24;UBERON:0007005,3.15e-07,24;UBERON:0004139,3.15e-07,24;UBERON:0004291,3.15e-07,24;UBERON:0000483,3.57e-07,306;UBERON:0001473,8.01e-07,8;UBERON:0004536,8.01e-07,8;UBERON:0006558,8.01e-07,8;UBERON:0002134,8.67e-07,1;UBERON:0005208,8.67e-07,1;UBERON:0005946,8.67e-07,1;UBERON:0005965,8.67e-07,1;UBERON:0002078,8.67e-07,1 | |||
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| ||
|short_description=p12@PDE7B | |short_description=p12@PDE7B | ||
}} | }} |
Latest revision as of 23:49, 24 September 2015
Short description: | p12@PDE7B |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_12_at_PDE7B_5end |
Coexpression cluster: | C328_Endothelial_Lymphatic_Renal_Hepatic_chronic_extraskeletal_adipose |
Association with transcript: | -364bp_to_uc003qgr.2_5end |
EntrezGene: | PDE7B |
HGNC: | 8792 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
endothelial cell of vascular tree | 1.34e-40 | 24 |
endothelial cell | 1.46e-38 | 36 |
blood vessel endothelial cell | 2.49e-33 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.49e-33 | 18 |
meso-epithelial cell | 4.42e-30 | 45 |
vein endothelial cell | 1.48e-22 | 6 |
lining cell | 1.77e-22 | 58 |
barrier cell | 1.77e-22 | 58 |
aortic endothelial cell | 1.85e-21 | 6 |
endothelial cell of artery | 3.67e-20 | 9 |
endothelial cell of umbilical vein | 6.51e-17 | 3 |
fibroblast of choroid plexus | 1.67e-11 | 2 |
mesodermal cell | 2.27e-11 | 121 |
lymphangioblast | 5.67e-09 | 6 |
endothelial cell of lymphatic vessel | 5.67e-09 | 6 |
vascular lymphangioblast | 5.67e-09 | 6 |
cardiac fibroblast | 2.81e-08 | 6 |
squamous epithelial cell | 5.41e-08 | 63 |