FFCP PHASE1:Hg19::chr6:132270532..132270550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1490 | |EntrezGene=1490 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=2500 | |HGNC=2500 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-145bp_to_AF127918_5end | |association_with_transcript=-145bp_to_AF127918_5end | ||
|cluster_id=chr6:132270532..132270550,- | |||
|coexpression_cluster_id=C506 | |||
|description=CAGE_peak_9_at_CTGF_5end | |description=CAGE_peak_9_at_CTGF_5end | ||
|id=chr6:132270532..132270550,- | |id=chr6:132270532..132270550,- | ||
|ontology_enrichment_celltype=CL:0000055!1.21e-26!180;CL:0000222!1.53e-23!119;CL:0000680!1.56e-17!57;CL:0000056!1.56e-17!57;CL:0000355!1.56e-17!57;CL:0000192!6.00e-17!42;CL:0000514!6.00e-17!42;CL:0000187!2.41e-16!54;CL:0000183!2.52e-16!59;CL:0000393!6.56e-15!60;CL:0000211!6.56e-15!60;CL:0000359!1.76e-14!32;CL:0000220!9.15e-14!246;CL:0002321!2.48e-13!248;CL:0000057!2.18e-11!75;CL:0002139!8.46e-09!24;CL:0002371!1.04e-08!591;CL:0000144!2.89e-08!625;CL:0000213!7.18e-08!57;CL:0000215!7.18e-08!57;CL:0000115!9.31e-08!35;CL:0002334!1.34e-07!12;CL:0000548!2.94e-07!679;CL:0000004!2.94e-07!679;CL:0000255!2.94e-07!679;CL:0002494!5.07e-07!16;CL:0002078!5.34e-07!44;CL:0000012!6.67e-07!682 | |ontology_enrichment_celltype=CL:0000055!1.21e-26!180;CL:0000222!1.53e-23!119;CL:0000680!1.56e-17!57;CL:0000056!1.56e-17!57;CL:0000355!1.56e-17!57;CL:0000192!6.00e-17!42;CL:0000514!6.00e-17!42;CL:0000187!2.41e-16!54;CL:0000183!2.52e-16!59;CL:0000393!6.56e-15!60;CL:0000211!6.56e-15!60;CL:0000359!1.76e-14!32;CL:0000220!9.15e-14!246;CL:0002321!2.48e-13!248;CL:0000057!2.18e-11!75;CL:0002139!8.46e-09!24;CL:0002371!1.04e-08!591;CL:0000144!2.89e-08!625;CL:0000213!7.18e-08!57;CL:0000215!7.18e-08!57;CL:0000115!9.31e-08!35;CL:0002334!1.34e-07!12;CL:0000548!2.94e-07!679;CL:0000004!2.94e-07!679;CL:0000255!2.94e-07!679;CL:0002494!5.07e-07!16;CL:0002078!5.34e-07!44;CL:0000012!6.67e-07!682 | ||
|ontology_enrichment_celltype_v019=CL:0000359;7.00e-13;32!CL:0002334;3.42e-11;12!CL:0000192;2.07e-09;43!CL:0002139;3.87e-08;24!CL:0000115;9.40e-08;36!CL:0000071;3.09e-07;18 | |||
|ontology_enrichment_celltype_v019_2=CL:0000222,1.20e-15,121;CL:0000359,4.48e-14,32;CL:0000192,1.64e-13,43;CL:0000514,1.64e-13,43;CL:0000057,3.51e-12,76;CL:0002334,4.68e-11,12;CL:0000680,9.37e-11,58;CL:0000056,9.37e-11,58;CL:0000355,9.37e-11,58;CL:0000187,5.58e-10,55;CL:0000393,5.65e-10,61;CL:0000211,5.65e-10,61;CL:0000115,5.60e-09,36;CL:0002321,9.20e-09,250;CL:0002139,3.14e-08,24;CL:0002078,7.26e-08,45;CL:0000048,7.66e-08,427;CL:0000723,2.05e-07,433;CL:0000071,2.20e-07,18;CL:0002546,2.20e-07,18;CL:0000034,7.19e-07,441;CL:1000413,9.29e-07,9 | |||
|ontology_enrichment_development_v019=CL:0000514;2.07e-09;43!CL:0002546;3.09e-07;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002049!6.89e-24!79;UBERON:0007798!6.89e-24!79;UBERON:0004872!3.06e-23!84;UBERON:0000055!5.20e-21!69;UBERON:0001981!1.52e-20!60;UBERON:0007500!1.52e-20!60;UBERON:0004537!1.52e-20!60;UBERON:0006965!1.52e-20!60;UBERON:0003914!1.96e-20!118;UBERON:0004535!1.48e-19!110;UBERON:0000490!1.61e-19!138;UBERON:0001637!3.64e-19!42;UBERON:0003509!3.64e-19!42;UBERON:0004572!3.64e-19!42;UBERON:0001009!6.45e-19!113;UBERON:0000914!7.70e-18!83;UBERON:0002329!7.70e-18!83;UBERON:0003077!7.70e-18!83;UBERON:0003059!7.70e-18!83;UBERON:0007282!7.70e-18!83;UBERON:0009618!7.70e-18!83;UBERON:0007285!7.70e-18!83;UBERON:0001134!1.02e-17!61;UBERON:0002036!1.02e-17!61;UBERON:0003082!1.02e-17!61;UBERON:0005256!2.15e-17!143;UBERON:0002385!1.65e-16!63;UBERON:0001015!1.65e-16!63;UBERON:0000383!1.65e-16!63;UBERON:0004290!4.30e-16!70;UBERON:0002100!9.07e-16!216;UBERON:0004573!2.17e-14!33;UBERON:0004571!2.17e-14!33;UBERON:0000486!9.32e-13!82;UBERON:0000119!2.87e-10!312;UBERON:0000483!6.74e-10!309;UBERON:0000475!1.68e-09!365;UBERON:0000947!2.62e-09!21;UBERON:0010191!2.62e-09!21;UBERON:0000477!3.44e-09!286;UBERON:0003104!5.99e-09!238;UBERON:0009142!5.99e-09!238;UBERON:0000926!1.30e-07!448;UBERON:0004120!1.30e-07!448;UBERON:0006603!1.30e-07!448;UBERON:0004111!3.38e-07!241;UBERON:0000468!3.50e-07!659 | |||
|ontology_enrichment_uberon_v019=UBERON:0001637;2.26e-16;42!UBERON:0003509;2.26e-16;42!UBERON:0004572;2.26e-16;42!UBERON:0007500;6.15e-13;56!UBERON:0001981;6.15e-13;56!UBERON:0004537;6.15e-13;56!UBERON:0004573;8.26e-13;33!UBERON:0004571;8.26e-13;33!UBERON:0000055;8.93e-11;65!UBERON:0003688;5.28e-10;6!UBERON:0002358;5.28e-10;6!UBERON:0003684;5.28e-10;6!UBERON:0001178;5.28e-10;6!UBERON:0003914;3.67e-09;74!UBERON:0000947;6.32e-09;21!UBERON:0010191;6.32e-09;21!UBERON:0002049;3.98e-08;75!UBERON:0007798;3.98e-08;75!UBERON:0004457;4.77e-08;9!UBERON:0000042;4.77e-08;9!UBERON:0004638;3.09e-07;18!UBERON:0001986;3.09e-07;18!UBERON:0004852;3.09e-07;18 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.29e-21,42;UBERON:0003509,4.29e-21,42;UBERON:0004572,4.29e-21,42;UBERON:0004872,1.67e-20,83;UBERON:0007500,6.68e-20,59;UBERON:0001981,6.68e-20,59;UBERON:0004537,6.68e-20,59;UBERON:0006965,6.68e-20,59;UBERON:0002049,7.76e-20,78;UBERON:0007798,7.76e-20,78;UBERON:0000055,2.05e-19,68;UBERON:0003914,3.77e-19,117;UBERON:0004535,1.10e-17,109;UBERON:0001009,8.09e-17,112;UBERON:0004573,1.91e-14,33;UBERON:0004571,1.91e-14,33;UBERON:0000490,1.25e-11,148;UBERON:0007503,2.43e-11,78;UBERON:0001134,1.81e-10,62;UBERON:0002036,1.81e-10,62;UBERON:0003082,1.81e-10,62;UBERON:0003688,4.79e-10,6;UBERON:0002358,4.79e-10,6;UBERON:0003684,4.79e-10,6;UBERON:0001178,4.79e-10,6;UBERON:0002385,6.77e-10,64;UBERON:0001015,6.77e-10,64;UBERON:0000383,6.77e-10,64;UBERON:0007524,2.19e-09,73;UBERON:0000947,3.47e-09,21;UBERON:0010191,3.47e-09,21;UBERON:0002329,6.24e-09,71;UBERON:0003059,6.24e-09,71;UBERON:0007282,6.24e-09,71;UBERON:0004290,6.24e-09,71;UBERON:0009618,6.24e-09,71;UBERON:0003077,1.06e-08,72;UBERON:0007285,1.06e-08,72;UBERON:0005256,2.33e-08,122;UBERON:0004638,2.20e-07,18;UBERON:0001986,2.20e-07,18;UBERON:0004852,2.20e-07,18;UBERON:0000483,2.21e-07,306;UBERON:0000025,2.50e-07,192;UBERON:0000486,3.34e-07,83;UBERON:0000119,3.86e-07,309;UBERON:0002100,3.93e-07,199;UBERON:0000487,8.36e-07,22;UBERON:0003915,9.29e-07,9;UBERON:0004700,9.29e-07,9;UBERON:0001917,9.29e-07,9 | |||
|phase1_expression=3.63356758541113,6.42301571672949,3.80576891059122,12.0087958023756,3.5756887554183,12.2127393374052,5.06599756336621,0,0,0,0,0.218441372130172,0.527533956456907,0.37129905888014,1.65698687863958,7.39557661096953,3.01347264011988,2.92124036154949,2.92759679274304,0.246242116153576,1.02000345622126,0,0.286235987131057,0,1.25542639594803,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.01210257911091,0.767175371061182,2.1686349143074,3.50936537445123,3.47631645505977,0,6.32625331393427,0.661743720148475,2.66075276955077,1.14185221401064,0,0,0,0,0,0,0,0,0,1.19257444420023,1.72046919021225,1.73570250803797,0,0.419499436209906,3.30141650328081,2.08994966536811,0.516833518338658,0.35576626268671,1.33888245105868,3.62546385398232,3.80136052859256,5.6134273236079,1.47065232138347,7.29127753093584,1.3394959242612,0.44905874525234,0.337834441449967,0,0,0.366403487860815,0,0,0,3.97577561356255,6.33152558322899,0.397227542439656,7.17091551872034,0.354668382198357,3.36406560085384,4.2699598291882,4.44001587150888,0.622422070799533,2.55950276932407,1.30769522490767,0.605429710579726,0,0,0.312160076830321,0.570471821544449,0,0,0,0,0,0.491337269247072,0,0,0.494533858557114,0,0,0.168336113954066,0,0.277064115484183,0.438977620880838,3.0648779579902,1.35214253015937,3.51639767796065,1.4351170855109,0.427114777637135,0.423863802319124,3.00091096084402,0.721367704669072,1.28820270022815,1.30281799432113,1.35021065793013,1.36411807225678,0.504867548488229,0.184099797284599,0,2.4850671476163,1.10827308050404,1.01736355386293,0,0,0,0,0,0.232387885739037,0.10366105501537,0.252320850875628,0,1.56449532329816,0.643240938192885,0,3.25057549622385,2.16563844500876,0,0.168584690078102,0,0,0,0,0,0,0,0.738155454624648,0,0,5.88034845542168,0,0,1.18157981336281,0,0,0.343135620597051,0,0,0.100528972411631,0,0,0,1.44331342025273,0,0.939269553886573,2.16549671641611,0.925971025153221,2.09279567458058,0,0,0,0,0,0,0.839910640994298,0.283550194484773,0.0895585227028483,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.112131084345361,0.43596006883328,0.22001485746285,0.904902010304444,0,0,1.59562869950922,1.04007436911366,0.257207374262142,0,0,1.00084595560703,0,0,0.325736184293735,1.42156779497018,0,0.301439377059586,0.871533458600294,0.299918973546171,0,0,0,3.11512312139057,0,0,1.01346914667305,1.2328579353023,0.716243852959582,0,0,0,0,0,0,0,0,1.27587750330633,0,0,0,1.10422342547226,0.500170521059677,0.542530047399471,3.53550464602372,7.67244651827796,5.20417969611984,5.15422225967938,0.601892199455438,0,2.0694614258501,0.664225598535437,1.47495334833363,0.0868836144680828,0,0,0,0,0,0,0,0.30239029332968,3.72161711728165,4.14347327877769,6.17452207752762,4.48487022394953,4.09365799253363,9.32952742632923,13.3576259800492,1.07946785661859,1.77561725313127,0,1.03850885836724,0.813472649219715,0,1.80455823272956,0,0.459257792658427,0.364182336013434,1.70461739447251,0,0.385076685522074,0,1.46139224653261,0.211103257785751,1.13733384070897,1.36074964221213,2.80690690932781,7.71136263451447,0.812839312631559,1.00337954770971,0,0,0,0,0,0,2.29610251989794,0.325378394664303,0,0,0,0,0,3.21367859688319,0.096670718292122,0.154048617114644,0.614014698904518,0.413509717453592,0,0.290033387828457,0.170453254832202,0.178064071293475,0,0,0.382838137483752,0,0.464845549297286,8.49993336442728,0.6970372701606,0.308033580176089,1.59691809095107,0,2.03856641014312,2.14687330112987,1.86079184679834,0.316379424718726,0.953150969619124,0.255897791311334,0,0,3.92474320099615,0.539617372749944,1.09814811894422,0.471249609382746,0.404364963146632,1.58510321173008,0.842516912477962,1.95053495635836,0.731140468893853,5.28250733783777,0.545999645631943,0.565621727814851,1.13008116620243,1.10273068709225,5.97095077717098,7.89211593456773,2.89387767133344,1.9676842561399,1.62328301570163,2.78841148289775,1.12678241012897,0.286822704408103,1.17898849215745,1.78335525740625,0,1.68886108238131,0.658589785919804,0,1.39973888097993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.18714054040822,0.146508179271894,0.606802608747567,0,0,0,0,0,0,0,0.111308705022906,0,0,0.597743964753209,0,0,1.73856760253663,0,9.64222721751603,0,0.179021174675609,0,0.197286811273867,0,0,0,0,0,0,0,0,0,0.254253650292766,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0.227884111694002,0,0,0,0.31900115973192,0.366390373607449,0.533034776018635,0,0,0,0,0,0,0,0,0.210998064528027,0,0.141353071433941,0,0,0,0,0,0,0,0,1.60515529459758,0,0,0,0,0.789168805698781,1.20990716048664,0,0.063186579628488,0,0,0,0.330991955875499,0,0,0.284609546029793,0.416024019039416,0,0,0,0.873633341210151,0.687944129886466,0,0,0,0.0969890164884194,0.706049013532002,0.677942222341597,0.411125773940253,0,0,0,0,0.426905989478705,0.19980960958213,0,0.229073192331831,0,0,0.248505071130865,0,0.271808412147228,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| ||
|short_description=p9@CTGF | |short_description=p9@CTGF | ||
}} | }} |
Latest revision as of 18:57, 24 September 2015
Short description: | p9@CTGF |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_CTGF_5end |
Coexpression cluster: | C506_Smooth_Renal_Endothelial_hepatic_Adipocyte_Fibroblast_Preadipocyte |
Association with transcript: | -145bp_to_AF127918_5end |
EntrezGene: | CTGF |
HGNC: | 2500 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesodermal cell | 1.20e-15 | 121 |
vascular associated smooth muscle cell | 4.48e-14 | 32 |
smooth muscle cell | 1.64e-13 | 43 |
smooth muscle myoblast | 1.64e-13 | 43 |
fibroblast | 3.51e-12 | 76 |
preadipocyte | 4.68e-11 | 12 |
muscle precursor cell | 9.37e-11 | 58 |
myoblast | 9.37e-11 | 58 |
multi-potent skeletal muscle stem cell | 9.37e-11 | 58 |
muscle cell | 5.58e-10 | 55 |
electrically responsive cell | 5.65e-10 | 61 |
electrically active cell | 5.65e-10 | 61 |
endothelial cell | 5.60e-09 | 36 |
embryonic cell | 9.20e-09 | 250 |
endothelial cell of vascular tree | 3.14e-08 | 24 |
meso-epithelial cell | 7.26e-08 | 45 |
multi fate stem cell | 7.66e-08 | 427 |
somatic stem cell | 2.05e-07 | 433 |
blood vessel endothelial cell | 2.20e-07 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.20e-07 | 18 |
stem cell | 7.19e-07 | 441 |
endothelial cell of artery | 9.29e-07 | 9 |