FFCP PHASE1:Hg19::chr6:1148441..1148443,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr6:1148441..1148443,+ | |||
|coexpression_cluster_id=C583 | |||
|description=CAGE_peak_at_chr6:1148441..1148443,+ | |description=CAGE_peak_at_chr6:1148441..1148443,+ | ||
|id=chr6:1148441..1148443,+ | |id=chr6:1148441..1148443,+ | ||
|ontology_enrichment_celltype=CL:0002057!1.09e-145!42;CL:0000860!1.88e-135!45;CL:0002009!7.08e-95!65;CL:0002194!6.94e-93!63;CL:0000576!6.94e-93!63;CL:0000040!6.94e-93!63;CL:0000559!6.94e-93!63;CL:0000557!2.67e-86!71;CL:0000839!6.10e-83!70;CL:0000766!2.79e-80!76;CL:0000763!3.73e-61!112;CL:0000049!3.73e-61!112;CL:0000738!2.37e-47!140;CL:0002031!2.91e-46!124;CL:0002087!8.67e-46!119;CL:0002032!5.92e-39!165;CL:0000837!5.92e-39!165;CL:0000037!4.90e-37!172;CL:0000566!4.90e-37!172;CL:0000988!1.50e-34!182;CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0000875!1.41e-13!3;CL:0002396!1.41e-13!3;CL:0000134!2.11e-13!358;CL:0002320!5.59e-13!365;CL:0000219!1.73e-11!390;CL:0000034!6.98e-10!444;CL:0000048!1.06e-09!430;CL:0000723!1.90e-09!436;CL:0000453!5.28e-08!5 | |ontology_enrichment_celltype=CL:0002057!1.09e-145!42;CL:0000860!1.88e-135!45;CL:0002009!7.08e-95!65;CL:0002194!6.94e-93!63;CL:0000576!6.94e-93!63;CL:0000040!6.94e-93!63;CL:0000559!6.94e-93!63;CL:0000557!2.67e-86!71;CL:0000839!6.10e-83!70;CL:0000766!2.79e-80!76;CL:0000763!3.73e-61!112;CL:0000049!3.73e-61!112;CL:0000738!2.37e-47!140;CL:0002031!2.91e-46!124;CL:0002087!8.67e-46!119;CL:0002032!5.92e-39!165;CL:0000837!5.92e-39!165;CL:0000037!4.90e-37!172;CL:0000566!4.90e-37!172;CL:0000988!1.50e-34!182;CL:0002393!3.22e-17!9;CL:0002397!3.22e-17!9;CL:0000875!1.41e-13!3;CL:0002396!1.41e-13!3;CL:0000134!2.11e-13!358;CL:0002320!5.59e-13!365;CL:0000219!1.73e-11!390;CL:0000034!6.98e-10!444;CL:0000048!1.06e-09!430;CL:0000723!1.90e-09!436;CL:0000453!5.28e-08!5 | ||
|ontology_enrichment_celltype_v019=CL:0000860;4.56e-84;33!CL:0002057;4.56e-84;33!CL:0000473;4.48e-58;39!CL:0000234;4.48e-58;39!CL:0000576;2.90e-49;48!CL:0000766;1.19e-38;69!CL:0000763;2.40e-12;100!CL:0002087;2.80e-12;104!CL:0000738;6.07e-07;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,3.01e-92,42;CL:0002057,3.01e-92,42;CL:0000473,2.51e-80,48;CL:0000234,2.51e-80,48;CL:0002194,1.25e-63,59;CL:0000576,1.25e-63,59;CL:0000040,1.25e-63,59;CL:0000559,1.25e-63,59;CL:0002009,1.79e-61,61;CL:0000766,9.67e-57,72;CL:0000839,1.20e-56,66;CL:0000557,9.11e-56,67;CL:0000763,6.56e-37,108;CL:0000049,6.56e-37,108;CL:0002087,2.51e-31,115;CL:0002031,6.80e-30,120;CL:0000738,1.13e-28,136;CL:0002032,1.02e-23,161;CL:0000837,1.02e-23,161;CL:0000037,1.37e-22,168;CL:0000988,2.85e-21,177;CL:0002393,6.50e-09,9;CL:0002397,6.50e-09,9;CL:0000134,7.61e-09,354;CL:0002320,1.34e-08,361;CL:0000219,9.74e-08,386 | |||
|ontology_enrichment_development_v019=CL:0002057;2.51e-64;42!CL:0000049;1.80e-12;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!8.19e-76!80;UBERON:0001474!5.01e-70!86;UBERON:0004765!1.56e-58!101;UBERON:0001434!1.56e-58!101;UBERON:0002390!6.91e-58!102;UBERON:0003061!6.91e-58!102;UBERON:0002193!4.82e-52!112;UBERON:0002405!1.74e-50!115;UBERON:0002204!2.56e-32!167;UBERON:0003081!3.75e-23!216;UBERON:0002384!2.11e-12!375;UBERON:0000926!7.07e-07!448;UBERON:0004120!7.07e-07!448;UBERON:0006603!7.07e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,7.18e-49,76;UBERON:0001474,4.21e-45,82;UBERON:0004765,7.55e-41,90;UBERON:0002405,1.94e-39,93;UBERON:0002390,2.79e-37,98;UBERON:0003061,2.79e-37,98;UBERON:0001434,1.78e-36,100;UBERON:0002193,1.49e-33,108;UBERON:0002204,1.42e-20,167;UBERON:0003081,2.52e-16,203;UBERON:0000926,2.97e-09,315;UBERON:0004120,2.97e-09,315;UBERON:0006603,2.97e-09,315;UBERON:0002384,2.88e-08,371 | |||
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|short_description=p@chr6:1148441..1148443,+ | |short_description=p@chr6:1148441..1148443,+ | ||
}} | }} |
Latest revision as of 18:35, 30 July 2015
Short description: | p@chr6:1148441..1148443, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr6:1148441..1148443, + |
Coexpression cluster: | C583_CD14_Monocytederived_Basophils_CD14CD16_immature_Mast_CD34 |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 3.01e-92 | 42 |
CD14-positive, CD16-negative classical monocyte | 3.01e-92 | 42 |
defensive cell | 2.51e-80 | 48 |
phagocyte | 2.51e-80 | 48 |
monopoietic cell | 1.25e-63 | 59 |
monocyte | 1.25e-63 | 59 |
monoblast | 1.25e-63 | 59 |
promonocyte | 1.25e-63 | 59 |
macrophage dendritic cell progenitor | 1.79e-61 | 61 |
myeloid leukocyte | 9.67e-57 | 72 |
myeloid lineage restricted progenitor cell | 1.20e-56 | 66 |
granulocyte monocyte progenitor cell | 9.11e-56 | 67 |
myeloid cell | 6.56e-37 | 108 |
common myeloid progenitor | 6.56e-37 | 108 |
nongranular leukocyte | 2.51e-31 | 115 |
hematopoietic lineage restricted progenitor cell | 6.80e-30 | 120 |
leukocyte | 1.13e-28 | 136 |
hematopoietic oligopotent progenitor cell | 1.02e-23 | 161 |
hematopoietic multipotent progenitor cell | 1.02e-23 | 161 |
hematopoietic stem cell | 1.37e-22 | 168 |
hematopoietic cell | 2.85e-21 | 177 |
intermediate monocyte | 6.50e-09 | 9 |
CD14-positive, CD16-positive monocyte | 6.50e-09 | 9 |
mesenchymal cell | 7.61e-09 | 354 |
connective tissue cell | 1.34e-08 | 361 |
motile cell | 9.74e-08 | 386 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 7.18e-49 | 76 |
bone element | 4.21e-45 | 82 |
skeletal element | 7.55e-41 | 90 |
immune system | 1.94e-39 | 93 |
hematopoietic system | 2.79e-37 | 98 |
blood island | 2.79e-37 | 98 |
skeletal system | 1.78e-36 | 100 |
hemolymphoid system | 1.49e-33 | 108 |
musculoskeletal system | 1.42e-20 | 167 |
lateral plate mesoderm | 2.52e-16 | 203 |
mesoderm | 2.97e-09 | 315 |
mesoderm-derived structure | 2.97e-09 | 315 |
presumptive mesoderm | 2.97e-09 | 315 |
connective tissue | 2.88e-08 | 371 |