FFCP PHASE1:Hg19::chr5:96077888..96077923,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=831 | |EntrezGene=831 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=1515 | |HGNC=1515 | ||
|TSSclassifier=strong | |||
|UniProt=D6RC54 | |UniProt=D6RC54 | ||
|association_with_transcript=0bp_to_ENST00000509259_5end | |association_with_transcript=0bp_to_ENST00000509259_5end | ||
|cluster_id=chr5:96077888..96077923,+ | |||
|coexpression_cluster_id=C33 | |||
|description=CAGE_peak_14_at_CAST_5end | |description=CAGE_peak_14_at_CAST_5end | ||
|id=chr5:96077888..96077923,+ | |id=chr5:96077888..96077923,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000764;1.55e-12;2!CL:0000558;1.55e-12;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0000764,1.55e-12,2;CL:0000765,1.55e-12,2;CL:0000050,1.55e-12,2;CL:0000038,1.55e-12,2;CL:0000558,1.55e-12,2;CL:0000547,1.55e-12,2;CL:0000549,1.55e-12,2;CL:0000550,1.55e-12,2;CL:0000552,1.55e-12,2 | |||
|ontology_enrichment_development_v019=UBERON:0005062;1.31e-12;4!UBERON:0007284;1.31e-12;4!UBERON:0010226;4.58e-07;1!UBERON:0010227;5.75e-07;1!UBERON:0004140;8.49e-07;1 | |||
|ontology_enrichment_disease=DOID:8692!1.44e-12!31;DOID:1036!2.71e-11!8;DOID:1240!1.30e-10!39;DOID:2531!3.12e-07!51;DOID:0060083!3.12e-07!51 | |||
|ontology_enrichment_disease_v019=DOID:1036;4.52e-24;8!DOID:8692;1.25e-18;31!DOID:114;6.49e-12;2!DOID:1240;7.73e-12;39!DOID:2531;1.99e-07;51!DOID:0060083;1.99e-07;51!DOID:8552;6.80e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:1036,4.43e-24,8;DOID:8692,5.53e-19,31;DOID:1240,1.20e-14,39;DOID:114,6.49e-12,2;DOID:2531,1.06e-10,51;DOID:0060083,1.06e-10,51;DOID:8552,6.80e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0007023!8.71e-15!115;UBERON:0004151!1.29e-08!3;UBERON:0000178!1.98e-08!15;UBERON:0000179!1.98e-08!15;UBERON:0000463!1.98e-08!15;UBERON:0003978!2.37e-08!3;UBERON:0009751!2.37e-08!3;UBERON:0000946!2.37e-08!3;UBERON:0002523!2.37e-08!3;UBERON:0005983!2.37e-08!3;UBERON:0002165!2.37e-08!3;UBERON:0002062!2.37e-08!3;UBERON:0007280!2.37e-08!3;UBERON:0007100!2.39e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.20e-17;3!UBERON:0003978;1.23e-16;3!UBERON:0000946;1.23e-16;3!UBERON:0007100;3.22e-16;25!UBERON:0002081;7.23e-12;2!UBERON:0002133;1.71e-11;2!UBERON:0000948;2.18e-08;22!UBERON:0002084;4.58e-07;1!UBERON:0002082;4.58e-07;1!UBERON:0002079;5.75e-07;1!UBERON:0002146;7.60e-07;1!UBERON:0005623;7.60e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004151,3.20e-17,3;UBERON:0003978,1.23e-16,3;UBERON:0009751,1.23e-16,3;UBERON:0000946,1.23e-16,3;UBERON:0002523,1.23e-16,3;UBERON:0005983,1.23e-16,3;UBERON:0002165,1.23e-16,3;UBERON:0002062,1.23e-16,3;UBERON:0007280,1.23e-16,3;UBERON:0007100,6.70e-15,27;UBERON:0002081,7.23e-12,2;UBERON:0010227,7.23e-12,2;UBERON:0002133,1.71e-11,2;UBERON:0007023,1.66e-08,114;UBERON:0000948,1.23e-07,24;UBERON:0005498,1.23e-07,24;UBERON:0004140,1.23e-07,24;UBERON:0009881,1.23e-07,24;UBERON:0004141,1.23e-07,24;UBERON:0003084,1.23e-07,24;UBERON:0007005,1.23e-07,24;UBERON:0004139,1.23e-07,24;UBERON:0004291,1.23e-07,24;UBERON:0004797,2.12e-07,7;UBERON:0002084,4.58e-07,1;UBERON:0002082,4.58e-07,1;UBERON:0010226,4.58e-07,1;UBERON:0002079,5.75e-07,1;UBERON:0002146,7.60e-07,1;UBERON:0005623,7.60e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,43.4583739878877,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,247.982920486552,218.821472507842,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.53723804616085,3.0585488285695,0.569647187174163,0,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84344458585075,0,0.667396566847634,0.586164286206121,0,36.9262196843137,13.2523282453232,0.99921590399346,28.1974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,37.5638401094353,18.0476528493745,23.5275041181287,22.3202710677871,65.8445452552922,69.9320947513666,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,6.98206003180636,35.9781865698343,5.0251111720377,8.38651802095763,50.2194476319788,73.4234094983761,27.6795906645312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,51.4580634988824,74.8163926512938,0,0,0,0,0,4.10462603746695,0,0,0,17.2258955585888,0,0,0,0,0.427149650270779,4.08731193259131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,11.598144313382,1.94284397223656,0,1.98950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,3.54518383854674,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,1.33982065078089,0,0,2.77204176471275,0.476128862927481,0,0.496597714366863,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,7.03922827210363,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.76160263600908,0,0,0,0,0,0,0,0,0,0,0,0.309706370895104,0,0,0,0,0,0,0,0,0,0,0,0.639337125799041,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.24203425192614,43.4583739878877,0,0,0,0.167186495390678,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.443458794925128,0,0.523916301990851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.116193942869518,0,0.252320850875628,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.246217006087397,0,0,0,0,0,0,0,0,0.492663237895943,0.352193736052904,0,0,0.12624243342638,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.206768026122887,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,247.982920486552,218.821472507842,0,0,0,0.309123034943167,0,0,0,0,0,0,0,0,0,0,0,0,0.0890320356467374,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0982490410131212,0,0,0,0,0,0,0,0,0,0.282431402330337,0,0,0,0,2.53723804616085,3.0585488285695,0.569647187174163,0,0.411362273086194,0,1.08006287447623,0.79312517629427,0,0,0,0.185803175125719,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.84344458585075,0,0.667396566847634,0.586164286206121,0,36.9262196843137,13.2523282453232,0.99921590399346,28.1974010175699,0,0.146508179271894,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.295930216910801,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153900517007594,0,0,0,0,0,0,0,0,0,37.5638401094353,18.0476528493745,23.5275041181287,22.3202710677871,65.8445452552922,69.9320947513666,0,0,0,0,0,0,0,0,0,0,0,0.802577647298789,0,0,0,0,0.394584402849391,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171594997861965,0,0,0,0,0,0,0,0,0,0,0,0,6.98206003180636,35.9781865698343,5.0251111720377,8.38651802095763,50.2194476319788,73.4234094983761,27.6795906645312,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0788057072991982,0.157363764404994,0,0,0,51.4580634988824,74.8163926512938,0,0,0,0,0,4.10462603746695,0,0,0,17.2258955585888,0,0,0,0,0.427149650270779,4.08731193259131,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.192619830407303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.138258436151731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161475645631851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0.266107110487916,0,0,0,0,0,0,0,0,0,0,0,0,0.142953088353313,0,0,0,0,0,0.17071847709395,0,0,0,0,0,0,0,0,0,0,0,0,0,11.598144313382,1.94284397223656,0,1.98950775161368,0,0,0,0,0,0.218559560503957,0,0.245148321753905,0,0,0,0.4226557275834,0,0,3.54518383854674,0,0,0,0,0,0.458729283404541,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.81868875723775,1.33982065078089,0,0,2.77204176471275,0.476128862927481,0,0.496597714366863,0,0.0636471582781649,0,0,0,0,0,0.332660356546013,0,0,0,0,7.03922827210363,0,0,0,0.201273793591026,0 | ||
|short_description=p14@CAST | |short_description=p14@CAST | ||
}} | }} |
Latest revision as of 09:14, 19 September 2015
Short description: | p14@CAST |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_14_at_CAST_5end |
Coexpression cluster: | C33_Reticulocytes_liver_Whole_blood_chronic_acute_spleen |
Association with transcript: | 0bp_to_ENST00000509259_5end |
EntrezGene: | CAST |
HGNC: | 1515 |
UniProt: | D6RC54 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
erythroid lineage cell | 1.55e-12 | 2 |
erythroblast | 1.55e-12 | 2 |
megakaryocyte-erythroid progenitor cell | 1.55e-12 | 2 |
erythroid progenitor cell | 1.55e-12 | 2 |
reticulocyte | 1.55e-12 | 2 |
proerythroblast | 1.55e-12 | 2 |
basophilic erythroblast | 1.55e-12 | 2 |
polychromatophilic erythroblast | 1.55e-12 | 2 |
orthochromatic erythroblast | 1.55e-12 | 2 |
Ontology term | p-value | n |
---|---|---|
cardiac chamber | 3.20e-17 | 3 |
valve | 1.23e-16 | 3 |
cardiac mesenchyme | 1.23e-16 | 3 |
cardial valve | 1.23e-16 | 3 |
tunica intima | 1.23e-16 | 3 |
heart layer | 1.23e-16 | 3 |
endocardium | 1.23e-16 | 3 |
endocardial cushion | 1.23e-16 | 3 |
presumptive endocardium | 1.23e-16 | 3 |
primary circulatory organ | 6.70e-15 | 27 |
cardiac atrium | 7.23e-12 | 2 |
future cardiac atrium | 7.23e-12 | 2 |
atrioventricular valve | 1.71e-11 | 2 |
adult organism | 1.66e-08 | 114 |
heart | 1.23e-07 | 24 |
primitive heart tube | 1.23e-07 | 24 |
primary heart field | 1.23e-07 | 24 |
anterior lateral plate mesoderm | 1.23e-07 | 24 |
heart tube | 1.23e-07 | 24 |
heart primordium | 1.23e-07 | 24 |
cardiac mesoderm | 1.23e-07 | 24 |
cardiogenic plate | 1.23e-07 | 24 |
heart rudiment | 1.23e-07 | 24 |
blood vessel layer | 2.12e-07 | 7 |
heart left ventricle | 4.58e-07 | 1 |
cardiac ventricle | 4.58e-07 | 1 |
future cardiac ventricle | 4.58e-07 | 1 |
left cardiac atrium | 5.75e-07 | 1 |
pulmonary valve | 7.60e-07 | 1 |
semi-lunar valve | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
chronic leukemia | 4.43e-24 | 8 |
myeloid leukemia | 5.53e-19 | 31 |
leukemia | 1.20e-14 | 39 |
heart disease | 6.49e-12 | 2 |
hematologic cancer | 1.06e-10 | 51 |
immune system cancer | 1.06e-10 | 51 |
chronic myeloid leukemia | 6.80e-07 | 1 |