FFCP PHASE1:Hg19::chr1:60280571..60280590,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=51361 | |EntrezGene=51361 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=19884 | |HGNC=19884 | ||
|TSSclassifier=strong | |||
|UniProt=Q9UJC3 | |UniProt=Q9UJC3 | ||
|association_with_transcript=38bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | |association_with_transcript=38bp_to_ENST00000371208,NM_015888,uc001czo.2_5end | ||
|cluster_id=chr1:60280571..60280590,+ | |||
|description=CAGE_peak_3_at_HOOK1_5end | |description=CAGE_peak_3_at_HOOK1_5end | ||
|id=chr1:60280571..60280590,+ | |id=chr1:60280571..60280590,+ | ||
|ontology_enrichment_celltype=CL:0000066!1.57e-12!254 | |ontology_enrichment_celltype=CL:0000066!1.57e-12!254 | ||
|ontology_enrichment_celltype_v019=CL:0000039;1.49e-12;7!CL:0000586;1.49e-12;7!CL:0000167;6.98e-07;1!CL:0000164;6.98e-07;1!CL:0000502;6.98e-07;1!CL:0000172;6.98e-07;1!CL:0000173;6.98e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000039,9.08e-13,7;CL:0000586,9.08e-13,7;CL:0000167,8.97e-07,1;CL:0000164,8.97e-07,1;CL:0000502,8.97e-07,1;CL:0000172,8.97e-07,1;CL:0000173,8.97e-07,1;CL:0002351,8.97e-07,1 | |||
|ontology_enrichment_development_v019=CL:0002351;6.98e-07;1 | |||
|ontology_enrichment_disease=DOID:305!1.62e-25!106;DOID:0050687!4.62e-20!143;DOID:162!1.65e-09!235;DOID:14566!7.24e-09!239;DOID:299!2.93e-07!25 | |ontology_enrichment_disease=DOID:305!1.62e-25!106;DOID:0050687!4.62e-20!143;DOID:162!1.65e-09!235;DOID:14566!7.24e-09!239;DOID:299!2.93e-07!25 | ||
|ontology_enrichment_disease_v019=DOID:4468;2.75e-11;2!DOID:299;4.68e-07;25!DOID:0050619;6.98e-07;1!DOID:1357;6.98e-07;1!DOID:4430;6.98e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:4468,2.23e-11,2;DOID:0050687,4.67e-08,143;DOID:299,4.43e-07,25;DOID:0050619,7.60e-07,1;DOID:1357,7.60e-07,1;DOID:305,8.61e-07,106;DOID:4430,8.97e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0004921!1.27e-12!129;UBERON:0004185!1.27e-12!129;UBERON:0001007!2.03e-12!155;UBERON:0001555!2.03e-12!155;UBERON:0007026!2.03e-12!155;UBERON:0004119!7.13e-12!169;UBERON:0000925!7.13e-12!169;UBERON:0006595!7.13e-12!169;UBERON:0000077!8.78e-09!130;UBERON:0000466!3.85e-08!126;UBERON:0007023!4.21e-08!115;UBERON:0002530!6.14e-08!59;UBERON:0005911!6.62e-08!82 | |ontology_enrichment_uberon=UBERON:0004921!1.27e-12!129;UBERON:0004185!1.27e-12!129;UBERON:0001007!2.03e-12!155;UBERON:0001555!2.03e-12!155;UBERON:0007026!2.03e-12!155;UBERON:0004119!7.13e-12!169;UBERON:0000925!7.13e-12!169;UBERON:0006595!7.13e-12!169;UBERON:0000077!8.78e-09!130;UBERON:0000466!3.85e-08!126;UBERON:0007023!4.21e-08!115;UBERON:0002530!6.14e-08!59;UBERON:0005911!6.62e-08!82 | ||
|ontology_enrichment_uberon_v019=UBERON:0001905;2.69e-12;2!UBERON:0002757;2.69e-12;2!UBERON:0010134;2.69e-12;2!UBERON:0005408;2.69e-12;2!UBERON:0001899;2.69e-12;2!UBERON:0005409;4.14e-08;22!UBERON:0000160;1.75e-07;17!UBERON:0001764;6.98e-07;1!UBERON:0001825;6.98e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,3.01e-12,2;UBERON:0002757,3.01e-12,2;UBERON:0010134,3.01e-12,2;UBERON:0005408,3.01e-12,2;UBERON:0001899,3.01e-12,2;UBERON:0000160,1.54e-07,17;UBERON:0005409,3.69e-07,25;UBERON:0001764,7.60e-07,1;UBERON:0001825,7.60e-07,1 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.305653622991805,0.164201178899891,0.236132343941038,0,0,0,0,0,0,0,0,0,0,0.200544447470142,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.393419540227666,0.393010762749165,0,0,0,0,0,0,0,0,0,0,0,0.164437904603676,0,0.289803085735052,0,0.267540828089713,0,0,0,0,0,0,0,0,0,0.255973222308837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130979075497713,0.364295288292542,0.370784442784429,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0.487894824518382,0.927708378250397,0.464775771478074,0.310983165046111,0.756962552626885,0.72995471815166,0,0,0,0,0,0,0,0,0.110293972732394,0,0.474541238222193,0,0,0,0,0,0,0,0,0.982827216677626,0.590789906681404,0,0.491953754172454,0,0.109750285408626,0,0.301586917234893,0.0925884451585296,0,0,0,0.115930404975077,0.117408694235822,0,0,0,0,0,0,0,0,0,0.503946384596579,0.425325291727159,0,0,0.766765358330422,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.362578348774867,0.200506470303285,0.276242966807689,0,0,0,0.451199612907412,0,0,0,0.105551628892876,0,0,0,0,0,0,0.509752546090077,0,0.223874754722178,0,0,0.256450125116389,0,0.325378394664303,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.255225424989168,0.6069466851333,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.03558180854457,0,0,0,0,0,0,0,0.238231775457789,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.278406173895242,0,0.540911356951966,0,4.22961015263549,0.561421621224659,0,0,0,0,0.71623345421307,0.593929361665277,1.53580351049616,0,0,0,0,0.211125408127993,0,0.552567831062295,1.51159648712566,0,0.123084805461069,0,0.359473404589307,0.179021174675609,0,0.0986434056369336,0,0,0,0,0,0.520855522170466,0.61221999997337,0,0.568967241427498,0.508507300585533,0,2.75794698593172,0,0.173624994933292,0,0.361789315876224,0,0.552896299656123,0.591095237907095,0,0,0.278847488557207,0.230850775511391,0,2.53620294826866,0,1.62971057883012,0.957003479195758,0.0915975934018623,0,0,0,0,0,0,0,0,0,1.89898258075224,1.14262965711403,0.141353071433941,0.216388639742091,2.98578579323551,0.884575645033392,2.4441205797345,0,0,0,0,0,0.234264445725339,0.182454789215666,0.19566461893209,0,1.57833761139756,0,0,0,0,0.311064574191741,0,0,0,0,1.42304773014896,0,0.347119476670262,0.195984794828755,0.261177619741208,0.34945333648406,0,0.0967563312890851,0.365446585430928,0.164230914106418,0.775912131907355,0,0.451961481561065,0,0,0,1.17330829640882,0.160317640503067,0,0,2.59362750877391,0,0.514784993585894,0,0.248505071130865,0.942776138467182,0,0,0,0,0,0,0,0,0,0.279282401272254,0,0,0.599037001496973,0,0,0,0,1.16495949527454,0.315132729228895,0.576911008668165,0.606631894687664,0,0.338693328263138,0,0.136203406111576,0.643012593860077,0.275078873194468,0.83088067605837,0.2249738915515,0.77380195455795,0.121499113316049,1.0063040627978,1.26089131678717,0.577000469484979,0.633602019116439,0,0.959575986597226,0,0,0,0,0,0,2.39460383124975,0,0,0,2.19828350517124,1.32506888912221,0.129282956361551,0.13223260174269,0.855434189421647,2.11444506695002,0.854299300541557,0.471612915298998,0,0,0,0.243585196761792,0.638341257770182,0,0,0,0,2.35581144375351,0,0,0,1.14681839138014,0,0.0620964029413835,0.138348634936231,0,0,0,0,0,0.28984205722165,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.214441591374926,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0,0.422624246717254,0,0,0,0,0,0.139879507719444,0,0,0,0.786329709279482,0,0.33946505990805,0,0.123935764259002,0,0,0,0,0,0,0,0,0.159633859057151,0.41023272848151,0,0.0691572524642179,0,0,0.0981477185010256,0.353909170043221,0.183428598521679,0,0,0,0,0.150420656698515,0,0.781514011233092,1.04762677792569,0,0.739280431085226,0,0,0,0.126831620387814,0,1.09651553371436,0,0,0.255524855279191,4.82131652290458,2.35398605553177,0.606965604236632,0.91064876540519,0.177404740325278,0,0,0.0679697329768317,0,0.236387681767936,0.111231401892069,0.313972371402056,0.314231179832004,0.280272163313789,2.73947616152849,0.215927591218621,0,0.571812353413251,0.158013611732727,0,0,0,0.207216164163037,0,0.691259661814092,0.860454717640555,0,0,0.423387050190929,0.22910686854405,0,0,0.447421727191169,0.098150233615243,1.46301509978723,0,0,0,0,0.935757853848423,1.19370465096821,0,0.45178432815584,0.769583617218004,1.81155412280008,2.70109553377806,0.874238242015829,0,0,2.12108892391463,0,0,0,0,0,0,0,0.178553938605658,0,0.240724100067505,0,0.917458566809082,0,0,0,0,2.1161073620616,0,0,0,0.126166424835079,0.437062287854782,0,0.61193297845189,1.60330443159336,5.78937867069523,0.752122617877125,0,0,0.829169439458779,0,0.426467963801962,0.23806443146374,0.0645889098360061,0,0,0.318235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| ||
|short_description=p3@HOOK1 | |short_description=p3@HOOK1 | ||
}} | }} |
Latest revision as of 17:44, 18 September 2015
Short description: | p3@HOOK1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOOK1_5end |
Coexpression cluster: | NA |
Association with transcript: | 38bp_to_ENST00000371208, NM_015888, uc001czo.2_5end |
EntrezGene: | HOOK1 |
HGNC: | 19884 |
UniProt: | Q9UJC3 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
germ line cell | 9.08e-13 | 7 |
germ cell | 9.08e-13 | 7 |
peptide hormone secreting cell | 8.97e-07 | 1 |
enteroendocrine cell | 8.97e-07 | 1 |
type D enteroendocrine cell | 8.97e-07 | 1 |
somatostatin secreting cell | 8.97e-07 | 1 |
pancreatic D cell | 8.97e-07 | 1 |
progenitor cell of endocrine pancreas | 8.97e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
pineal body | 3.01e-12 | 2 |
regional part of epithalamus | 3.01e-12 | 2 |
secretory circumventricular organ | 3.01e-12 | 2 |
circumventricular organ | 3.01e-12 | 2 |
epithalamus | 3.01e-12 | 2 |
intestine | 1.54e-07 | 17 |
gastrointestinal system | 3.69e-07 | 25 |
maxillary sinus | 7.60e-07 | 1 |
paranasal sinus | 7.60e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
clear cell adenocarcinoma | 2.23e-11 | 2 |
cell type cancer | 4.67e-08 | 143 |
adenocarcinoma | 4.43e-07 | 25 |
paranasal sinus cancer | 7.60e-07 | 1 |
maxillary sinus cancer | 7.60e-07 | 1 |
carcinoma | 8.61e-07 | 106 |
somatostatinoma | 8.97e-07 | 1 |