FFCP PHASE1:Hg19::chr5:72744562..72744573,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=2297 | |EntrezGene=2297 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=3802 | |HGNC=3802 | ||
|TSSclassifier=strong | |||
|UniProt=Q16676 | |UniProt=Q16676 | ||
|association_with_transcript=-210bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | |association_with_transcript=-210bp_to_ENST00000328926,NM_004472,uc003kcp.2_5end | ||
|cluster_id=chr5:72744562..72744573,- | |||
|coexpression_cluster_id=C2827 | |||
|description=CAGE_peak_3_at_FOXD1_5end | |description=CAGE_peak_3_at_FOXD1_5end | ||
|id=chr5:72744562..72744573,- | |id=chr5:72744562..72744573,- | ||
|ontology_enrichment_celltype=CL:0000055!9.28e-36!180;CL:0000057!1.47e-19!75;CL:0000548!1.87e-13!679;CL:0000004!1.87e-13!679;CL:0000255!1.87e-13!679;CL:0000183!7.31e-13!59;CL:0000012!8.32e-13!682;CL:0000192!2.37e-11!42;CL:0000514!2.37e-11!42;CL:0000680!2.69e-11!57;CL:0000056!2.69e-11!57;CL:0000355!2.69e-11!57;CL:0000187!3.00e-11!54;CL:0000359!3.53e-11!32;CL:0002620!3.71e-11!23;CL:0000220!4.90e-11!246;CL:0002321!9.49e-11!248;CL:0000144!3.87e-09!625;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60;CL:0002371!3.40e-08!591;CL:0000035!4.30e-07!20;CL:0000003!9.93e-07!722 | |ontology_enrichment_celltype=CL:0000055!9.28e-36!180;CL:0000057!1.47e-19!75;CL:0000548!1.87e-13!679;CL:0000004!1.87e-13!679;CL:0000255!1.87e-13!679;CL:0000183!7.31e-13!59;CL:0000012!8.32e-13!682;CL:0000192!2.37e-11!42;CL:0000514!2.37e-11!42;CL:0000680!2.69e-11!57;CL:0000056!2.69e-11!57;CL:0000355!2.69e-11!57;CL:0000187!3.00e-11!54;CL:0000359!3.53e-11!32;CL:0002620!3.71e-11!23;CL:0000220!4.90e-11!246;CL:0002321!9.49e-11!248;CL:0000144!3.87e-09!625;CL:0000393!1.02e-08!60;CL:0000211!1.02e-08!60;CL:0002371!3.40e-08!591;CL:0000035!4.30e-07!20;CL:0000003!9.93e-07!722 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.94e-12;23!CL:0000057;1.07e-09;73!CL:0000359;1.07e-09;32!CL:0002539;2.80e-07;10!CL:0000062;7.56e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.72e-21,76;CL:0002620,1.27e-12,23;CL:0000359,2.20e-10,32;CL:0000192,1.51e-08,43;CL:0000514,1.51e-08,43;CL:0000187,3.97e-08,55;CL:0000062,4.30e-08,11;CL:0000375,4.30e-08,11;CL:0000335,4.30e-08,11;CL:0002539,1.12e-07,10;CL:0000680,1.15e-07,58;CL:0000056,1.15e-07,58;CL:0000355,1.15e-07,58;CL:0002321,6.85e-07,250 | |||
|ontology_enrichment_development_v019=CL:0000335;3.65e-08;11 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!7.01e-21!365;UBERON:0000914!8.10e-15!83;UBERON:0002329!8.10e-15!83;UBERON:0003077!8.10e-15!83;UBERON:0003059!8.10e-15!83;UBERON:0007282!8.10e-15!83;UBERON:0009618!8.10e-15!83;UBERON:0007285!8.10e-15!83;UBERON:0002100!5.40e-14!216;UBERON:0002199!1.46e-13!45;UBERON:0002416!1.46e-13!45;UBERON:0003102!1.61e-13!95;UBERON:0002097!3.86e-13!40;UBERON:0005256!5.31e-13!143;UBERON:0004290!4.04e-12!70;UBERON:0000486!8.07e-12!82;UBERON:0001134!2.92e-09!61;UBERON:0002036!2.92e-09!61;UBERON:0003082!2.92e-09!61;UBERON:0003104!8.58e-09!238;UBERON:0009142!8.58e-09!238;UBERON:0002385!1.20e-08!63;UBERON:0001015!1.20e-08!63;UBERON:0000383!1.20e-08!63;UBERON:0000481!5.09e-08!347;UBERON:0005085!7.12e-07!29;UBERON:0001444!9.19e-07!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0002097;2.63e-10;41!UBERON:0002199;4.37e-09;46!UBERON:0002416;4.37e-09;46!UBERON:0003102;2.09e-08;50!UBERON:0010371;1.26e-07;31!UBERON:0004237;2.80e-07;10!UBERON:0004695;2.80e-07;10!UBERON:0002111;2.80e-07;10!UBERON:0004178;2.80e-07;10!UBERON:0001434;9.27e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002199,7.06e-14,46;UBERON:0002416,7.06e-14,46;UBERON:0002097,1.39e-13,41;UBERON:0007503,6.97e-11,78;UBERON:0003102,9.06e-10,99;UBERON:0007524,2.73e-09,73;UBERON:0002329,3.30e-09,71;UBERON:0003059,3.30e-09,71;UBERON:0007282,3.30e-09,71;UBERON:0004290,3.30e-09,71;UBERON:0009618,3.30e-09,71;UBERON:0000486,4.08e-09,83;UBERON:0003077,6.72e-09,72;UBERON:0007285,6.72e-09,72;UBERON:0004237,1.12e-07,10;UBERON:0004695,1.12e-07,10;UBERON:0002111,1.12e-07,10;UBERON:0004178,1.12e-07,10;UBERON:0001637,5.38e-07,42;UBERON:0003509,5.38e-07,42;UBERON:0004572,5.38e-07,42 | |||
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| ||
|short_description=p3@FOXD1 | |short_description=p3@FOXD1 | ||
}} | }} |
Latest revision as of 16:02, 18 September 2015
Short description: | p3@FOXD1 |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_FOXD1_5end |
Coexpression cluster: | C2827_Pericytes_Osteoblast_Smooth_astrocytoma_Fibroblast_transitionalcell_alveolar |
Association with transcript: | -210bp_to_ENST00000328926, NM_004472, uc003kcp.2_5end |
EntrezGene: | FOXD1 |
HGNC: | 3802 |
UniProt: | Q16676 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.72e-21 | 76 |
skin fibroblast | 1.27e-12 | 23 |
vascular associated smooth muscle cell | 2.20e-10 | 32 |
smooth muscle cell | 1.51e-08 | 43 |
smooth muscle myoblast | 1.51e-08 | 43 |
muscle cell | 3.97e-08 | 55 |
osteoblast | 4.30e-08 | 11 |
osteoprogenitor cell | 4.30e-08 | 11 |
mesenchyme condensation cell | 4.30e-08 | 11 |
aortic smooth muscle cell | 1.12e-07 | 10 |
muscle precursor cell | 1.15e-07 | 58 |
myoblast | 1.15e-07 | 58 |
multi-potent skeletal muscle stem cell | 1.15e-07 | 58 |
embryonic cell | 6.85e-07 | 250 |
Ontology term | p-value | n |
---|---|---|
integument | 7.06e-14 | 46 |
integumental system | 7.06e-14 | 46 |
skin of body | 1.39e-13 | 41 |
epithelial vesicle | 6.97e-11 | 78 |
surface structure | 9.06e-10 | 99 |
dense mesenchyme tissue | 2.73e-09 | 73 |
somite | 3.30e-09 | 71 |
presomitic mesoderm | 3.30e-09 | 71 |
presumptive segmental plate | 3.30e-09 | 71 |
dermomyotome | 3.30e-09 | 71 |
trunk paraxial mesoderm | 3.30e-09 | 71 |
multilaminar epithelium | 4.08e-09 | 83 |
paraxial mesoderm | 6.72e-09 | 72 |
presumptive paraxial mesoderm | 6.72e-09 | 72 |
blood vessel smooth muscle | 1.12e-07 | 10 |
arterial system smooth muscle | 1.12e-07 | 10 |
artery smooth muscle tissue | 1.12e-07 | 10 |
aorta smooth muscle tissue | 1.12e-07 | 10 |
artery | 5.38e-07 | 42 |
arterial blood vessel | 5.38e-07 | 42 |
arterial system | 5.38e-07 | 42 |