FFCP PHASE1:Hg19::chr12:772770..772781,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:772770..772781,-
|short_description=p11@NINJ2
|description=CAGE_peak_11_at_NINJ2_5end
|association_with_transcript=-15bp_to_NM_016533,uc001qil.2,uc010sds....") |
No edit summary |
||
(12 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=4815 | |EntrezGene=4815 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=7825 | |HGNC=7825 | ||
|TSSclassifier=strong | |||
|UniProt=Q9NZG7 | |UniProt=Q9NZG7 | ||
|association_with_transcript=-15bp_to_NM_016533,uc001qil.2,uc010sds.1_5end | |||
|cluster_id=chr12:772770..772781,- | |||
|description=CAGE_peak_11_at_NINJ2_5end | |||
|id=chr12:772770..772781,- | |||
|ontology_enrichment_celltype=CL:0000080!1.24e-07!6 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0006222;5.92e-26;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001049!1.94e-52!57;UBERON:0005068!1.94e-52!57;UBERON:0006241!1.94e-52!57;UBERON:0007135!1.94e-52!57;UBERON:0002616!8.11e-47!59;UBERON:0000955!9.54e-42!69;UBERON:0006238!9.54e-42!69;UBERON:0001017!6.60e-37!82;UBERON:0005743!6.46e-35!86;UBERON:0002780!4.15e-33!41;UBERON:0001890!4.15e-33!41;UBERON:0006240!4.15e-33!41;UBERON:0003075!1.01e-32!86;UBERON:0007284!1.01e-32!86;UBERON:0003080!3.13e-32!42;UBERON:0001893!4.75e-32!34;UBERON:0002020!8.94e-32!34;UBERON:0003528!8.94e-32!34;UBERON:0007023!2.87e-31!115;UBERON:0000073!4.89e-31!94;UBERON:0001016!4.89e-31!94;UBERON:0002346!5.44e-31!90;UBERON:0002791!4.12e-29!33;UBERON:0002298!2.25e-26!8;UBERON:0001869!2.90e-26!32;UBERON:0000033!1.33e-22!123;UBERON:0004733!3.60e-22!12;UBERON:0002028!3.60e-22!12;UBERON:0007277!3.60e-22!12;UBERON:0003076!7.02e-22!15;UBERON:0003057!7.02e-22!15;UBERON:0000153!2.97e-21!129;UBERON:0007811!2.97e-21!129;UBERON:0003056!6.09e-21!61;UBERON:0002619!1.37e-20!22;UBERON:0004732!2.30e-20!13;UBERON:0001950!7.50e-19!20;UBERON:0000200!2.93e-18!6;UBERON:0000956!5.95e-18!25;UBERON:0000203!5.95e-18!25;UBERON:0002308!6.48e-17!9;UBERON:0000125!6.48e-17!9;UBERON:0004121!1.55e-14!169;UBERON:0001896!2.77e-14!3;UBERON:0005290!2.77e-14!3;UBERON:0010096!2.77e-14!3;UBERON:0000924!4.71e-14!173;UBERON:0006601!4.71e-14!173;UBERON:0000988!5.86e-14!3;UBERON:0002771!1.28e-13!3;UBERON:0006331!1.81e-13!3;UBERON:0002680!9.02e-12!9;UBERON:0001895!9.02e-12!9;UBERON:0010092!9.02e-12!9;UBERON:0000025!5.71e-11!194;UBERON:0009663!3.42e-10!7;UBERON:0002148!1.20e-09!2;UBERON:0009662!1.20e-09!2;UBERON:0001871!6.32e-09!7;UBERON:0000064!7.57e-09!219;UBERON:0004111!1.87e-08!241;UBERON:0000477!3.24e-08!286;UBERON:0002420!6.14e-08!9;UBERON:0007245!6.14e-08!9;UBERON:0010009!6.14e-08!9;UBERON:0010011!6.14e-08!9;UBERON:0000454!6.14e-08!9 | |||
|ontology_enrichment_uberon_v019=UBERON:0002336;5.92e-26;1!UBERON:0011215;5.92e-26;1!UBERON:0001018;5.92e-26;1!UBERON:0002473;5.92e-26;1!UBERON:0005340;5.92e-26;1!UBERON:0003544;5.92e-26;1!UBERON:0005970;5.92e-26;1!UBERON:0002316;5.92e-26;1!UBERON:0001020;5.92e-26;1!UBERON:0002437;5.92e-26;1!UBERON:0002331;5.13e-23;10!UBERON:0000178;1.31e-15;15!UBERON:0000179;1.31e-15;15!UBERON:0000463;1.31e-15;15!UBERON:0001875;1.07e-13;2!UBERON:0005162;1.07e-13;2!UBERON:0000122;1.07e-13;2!UBERON:0006514;1.07e-13;2!UBERON:0000478;5.07e-10;24!UBERON:0000988;1.41e-09;3!UBERON:0002390;9.50e-08;32!UBERON:0000073;9.96e-08;53!UBERON:0002616;9.96e-08;53 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002336,2.78e-26,1;UBERON:0011215,2.78e-26,1;UBERON:0001018,2.78e-26,1;UBERON:0002473,2.78e-26,1;UBERON:0005340,2.78e-26,1;UBERON:0003544,2.78e-26,1;UBERON:0005970,2.78e-26,1;UBERON:0002316,2.78e-26,1;UBERON:0001020,2.78e-26,1;UBERON:0002437,2.78e-26,1;UBERON:0002331,4.76e-23,10;UBERON:0000358,4.76e-23,10;UBERON:0000307,4.76e-23,10;UBERON:0000091,4.76e-23,10;UBERON:0000087,4.76e-23,10;UBERON:0007010,4.76e-23,10;UBERON:0007806,4.76e-23,10;UBERON:0008780,4.76e-23,10;UBERON:0005728,4.76e-23,10;UBERON:0000178,1.24e-15,15;UBERON:0000179,1.24e-15,15;UBERON:0000463,1.24e-15,15;UBERON:0005162,7.30e-14,2;UBERON:0000122,7.30e-14,2;UBERON:0001875,1.21e-13,2;UBERON:0006514,1.21e-13,2;UBERON:0000478,4.92e-10,24;UBERON:0000988,1.67e-09,3;UBERON:0000073,8.93e-08,53;UBERON:0002616,8.93e-08,53;UBERON:0001049,2.20e-07,56;UBERON:0005068,2.20e-07,56;UBERON:0006241,2.20e-07,56;UBERON:0007135,2.20e-07,56 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,1.48276726735803,2.19286093961456,1.88723172345896,0,1.63985112007737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.776503360757966,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0.82046545696302,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,0.855046056317038,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.205601498999509,0,0,0,0,0,0.294605907474837,0.443067789167242,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.261958150995425,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.511707249066704,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.618246069886334,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.188287601553558,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.00299045849731,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.463840490809256,0,0,0,0,0,0,0,0,0,0,0,0,0,0.110579259931225,0.295547618953547,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0884575645033392,0,1.18608451472249,1.48276726735803,2.19286093961456,1.88723172345896,0,1.63985112007737,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.569797163602908,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.09524303113594,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272406812223151,0,0,0,0,0,0.242998226632099,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.775697738169303,0.26446520348538,0,0,0,0,0,0,0.790446527591777,0,0,0,0,0,0,0,0,0.366078794705889,0.3755727921195,0.573409195690071,0.776503360757966,0.931446044120752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.553033744606923,0,0,0,0,0,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.513833800771676,0,0,0.82046545696302,0,0.276629009856872,0.322951291263702,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.607838261565552,0,0,0.380494861163441,0,0,0,0,0,0,0,0,0,0,0,0,1.08751572762931,0.855046056317038,0,0,0,0.314231179832004,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0,0,0,0.199882311849858,0,0,0,0,0,0.286679166302903,0,0.747906392100062,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.413731983447581,0,0,0,0,0,0.0636471582781649,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0 | ||
|short_description=p11@NINJ2 | |||
}} | }} |
Latest revision as of 21:53, 24 September 2015
Short description: | p11@NINJ2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_11_at_NINJ2_5end |
Coexpression cluster: | NA |
Association with transcript: | -15bp_to_NM_016533, uc001qil.2, uc010sds.1_5end |
EntrezGene: | NINJ2 |
HGNC: | 7825 |
UniProt: | Q9NZG7 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
corpus callosum | 2.78e-26 | 1 |
central nervous system cell part cluster | 2.78e-26 | 1 |
axon tract | 2.78e-26 | 1 |
intercerebral commissure | 2.78e-26 | 1 |
dorsal telencephalic commissure | 2.78e-26 | 1 |
brain white matter | 2.78e-26 | 1 |
brain commissure | 2.78e-26 | 1 |
white matter | 2.78e-26 | 1 |
nervous system commissure | 2.78e-26 | 1 |
cerebral hemisphere white matter | 2.78e-26 | 1 |
umbilical cord | 4.76e-23 | 10 |
blastocyst | 4.76e-23 | 10 |
blastula | 4.76e-23 | 10 |
bilaminar disc | 4.76e-23 | 10 |
inner cell mass | 4.76e-23 | 10 |
cleaving embryo | 4.76e-23 | 10 |
connecting stalk | 4.76e-23 | 10 |
inner cell mass derived epiblast | 4.76e-23 | 10 |
extraembryonic mesoderm | 4.76e-23 | 10 |
blood | 1.24e-15 | 15 |
haemolymphatic fluid | 1.24e-15 | 15 |
organism substance | 1.24e-15 | 15 |
multi cell component structure | 7.30e-14 | 2 |
neuron projection bundle | 7.30e-14 | 2 |
globus pallidus | 1.21e-13 | 2 |
pallidum | 1.21e-13 | 2 |
extraembryonic structure | 4.92e-10 | 24 |
pons | 1.67e-09 | 3 |
regional part of nervous system | 8.93e-08 | 53 |
regional part of brain | 8.93e-08 | 53 |
neural tube | 2.20e-07 | 56 |
neural rod | 2.20e-07 | 56 |
future spinal cord | 2.20e-07 | 56 |
neural keel | 2.20e-07 | 56 |