FFCP PHASE1:Hg19::chr12:76053897..76053902,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:76053897..76053902,+
|short_description=p@chr12:76053897..76053902,+
|description=CAGE_peak_at_chr12:76053897..76053902,+
|association_with_transcript=NA
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:76053897..76053902,+ | |||
|description=CAGE_peak_at_chr12:76053897..76053902,+ | |||
|id=chr12:76053897..76053902,+ | |||
|ontology_enrichment_celltype=CL:0000066!2.80e-08!254;CL:0000068!3.93e-07!3;CL:0000069!3.93e-07!3;CL:0000307!3.93e-07!3;CL:0000377!3.93e-07!3;CL:0002368!7.47e-07!13 | |||
|ontology_enrichment_celltype_v019=CL:0002202;2.10e-25;9!CL:0002632;2.10e-25;9!CL:0000307;7.86e-20;3!CL:0002368;1.04e-17;13!CL:1001319;1.66e-15;1!CL:1000600;1.66e-15;1!CL:0002535;2.07e-08;2 | |||
|ontology_enrichment_celltype_v019_2=CL:0002202,2.11e-25,9;CL:0002632,2.11e-25,9;CL:0000068,1.69e-19,3;CL:0000069,1.69e-19,3;CL:0000307,1.69e-19,3;CL:0000377,1.69e-19,3;CL:0002368,1.04e-17,13;CL:1001319,1.34e-15,1;CL:1000600,1.34e-15,1;CL:0002535,1.39e-08,2;CL:0002076,1.81e-08,42 | |||
|ontology_enrichment_development_v019=CL:0000377;7.86e-20;3 | |||
|ontology_enrichment_disease=DOID:1749!3.89e-18!14;DOID:305!6.50e-11!106;DOID:14566!9.91e-10!239;DOID:162!6.37e-09!235;DOID:0050687!1.99e-08!143 | |||
|ontology_enrichment_disease_v019=DOID:1749;1.02e-09;14!DOID:1909;1.20e-08;2!DOID:3910;2.07e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:1749,9.52e-10,14;DOID:1909,1.20e-08,2;DOID:3910,1.61e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0003343!6.23e-08!4;UBERON:0004785!6.23e-08!4 | |||
|ontology_enrichment_uberon_v019=UBERON:0004645;1.66e-15;1!UBERON:0001256;1.66e-15;1!UBERON:0001259;1.66e-15;1!UBERON:0007196;2.14e-15;15!UBERON:0001558;2.14e-15;15!UBERON:0003126;4.75e-09;7!UBERON:0001005;4.75e-09;7!UBERON:0001255;2.07e-08;2!UBERON:0004903;2.07e-08;2!UBERON:0006955;2.07e-08;2!UBERON:0004801;2.07e-08;2!UBERON:0001556;2.07e-08;2!UBERON:0002173;2.07e-08;2!UBERON:0002186;2.07e-08;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004645,1.34e-15,1;UBERON:0001256,1.34e-15,1;UBERON:0001259,1.34e-15,1;UBERON:0007196,2.14e-15,15;UBERON:0001558,2.14e-15,15;UBERON:0003126,6.56e-09,7;UBERON:0001005,6.56e-09,7;UBERON:0006955,1.39e-08,2;UBERON:0004801,1.39e-08,2;UBERON:0004903,1.61e-08,2;UBERON:0002173,1.61e-08,2;UBERON:0002186,1.61e-08,2;UBERON:0001255,1.86e-08,2;UBERON:0001556,1.86e-08,2;UBERON:0005178,6.20e-07,34;UBERON:0002224,6.20e-07,34;UBERON:0005181,9.66e-07,35 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0,0,0,0,0,1.47901604066715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0945348171640679,0,0.087834785693126,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0.312160076830321,0,0.149448680551801,0.23486899728753,0,0.140450806702248,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.179389635688862,0,0,0,0,0,0,0.168776332241266,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.38134921352481,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.171567810298526,0.219500570817251,0,0.201057944823262,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.283550194484773,1.16426079513703,0.581267877027924,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.845302752556,0,0,0.257207374262142,0,0.266422179016099,0,0,0,0,0,0.791951872933429,0,0,0,0,0,0,0,0,0,0,0,0.179060963239896,0,0,0,0,0,0,0,0.167516265334349,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.154209693802656,0,0.164254312027618,0,0.116210378459959,0,0,0.0920809889358963,0,0,0,0,0.0770153371044148,0,0,0,0,0,0.215915916102139,0,0,0,0.254876273045038,0.831076008928724,0,0,0,0.512900250232778,0,0,0,0,0,0,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.413509717453592,0,0,0.0852266274161009,0,0.165284915360978,0,0.638063562472921,0,0,0.31481234683064,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.66343897524122,0,0,0,0,0,0.281695602532241,0,0.0982490410131212,0,0.354761064070598,0,0,0,0,1.05844323998063,0.670302275535787,1.08890984861323,0,0,0,0,0,0,0,0,0,0,0,0,0,0.106824071127473,0,0.735120647943095,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.42068073403207,0,0,0,0,0,0,0.494411622680279,0,0.19924798825107,0,0,0,0,0,0.269605053441981,0,0,0,0,0,0,0,0,0,0,0,1.0241410345695,0,0,0,0,0,0,0,0,0,0,0,0,0.278847488557207,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.37950746544837,0.158936578980379,0.210998064528027,0,0,0,0,0,0,0.296521128680622,0.370691816839509,0,0,0,0,0,0,0.242780379534093,0,0,0,0,0.300646838828985,0,0,0,0,0,0,0,0,0.293977192243133,1.65412492502765,0,0,0.19351266257817,0,0,0,0,0,0.411125773940253,0,0,0,0.240476460754601,0,0,0,0,0,0.720273989940749,0.372757606696298,0.235694034616795,0.543616824294456,1.255234155748,0,0.288950589901519,0,0,0,0,0.262887354279314,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.191915197319445,0,0,0,0,0,0,0,0.082092520749339,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.638341257770182,0,0,0,0,0.471162288750703,0,0,0,0,0,0,0,0.124980407962107,3.63957882099955,0,0,0,0,0.149254802886874,0,0,0,0,0,0,0,0.310874401165561,0.147855149989634,0,0,0.155262956876259,0,0,0,0.300515217994437,0.380805212168795,0,0,0,0,0,0.400027764663154,0,0,0,0,0.214441591374926,0.521988583930423,0,0,0,0,0,0.438568099157414,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.139879507719444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0981477185010256,0.471878893390961,0.550285795565037,0.808679663052368,0,0.690359926060101,0,0,0.20170506870352,0,0,0.818859587550484,0.739280431085226,0,0,0,0,0,0,0,0,0.383287282918786,0,0,0,0,0,0,0,0,0,0.354581522651905,0.333694205676207,0,0,0,0,0.215927591218621,0,0,0,0.464965701472501,0,0,0,0,0,0,0.946656005844523,1.36341447614652,0,0,0,2.8666168169323,0,0.294450700845729,0,0,0,0,0,0,0,0,0.11294608203896,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.892769693028288,1.41157948686277,0,0,0,0,0,0,0,0,0,0,0,0,0.109265571963696,0,0,0,0,0,0,0,0,0,0,0,0,0.0620747142958579,0,0,0,0,0,0,0,0,1.38385556638657,0,0,0.179650404213174,0,0,0,0,0,0 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| ||
|short_description=p@chr12:76053897..76053902,+ | |||
}} | }} |
Latest revision as of 12:24, 24 July 2015
Short description: | p@chr12:76053897..76053902, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:76053897..76053902, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of tracheobronchial tree | 2.11e-25 | 9 |
epithelial cell of lower respiratory tract | 2.11e-25 | 9 |
duct epithelial cell | 1.69e-19 | 3 |
branched duct epithelial cell | 1.69e-19 | 3 |
tracheal epithelial cell | 1.69e-19 | 3 |
tracheoblast | 1.69e-19 | 3 |
respiratory epithelial cell | 1.04e-17 | 13 |
bladder cell | 1.34e-15 | 1 |
lower urinary tract cell | 1.34e-15 | 1 |
epithelial cell of cervix | 1.39e-08 | 2 |
endo-epithelial cell | 1.81e-08 | 42 |
Ontology term | p-value | n |
---|---|---|
urinary bladder urothelium | 1.34e-15 | 1 |
wall of urinary bladder | 1.34e-15 | 1 |
mucosa of urinary bladder | 1.34e-15 | 1 |
tracheobronchial tree | 2.14e-15 | 15 |
lower respiratory tract | 2.14e-15 | 15 |
trachea | 6.56e-09 | 7 |
respiratory airway | 6.56e-09 | 7 |
uterine epithelium | 1.39e-08 | 2 |
cervix epithelium | 1.39e-08 | 2 |
bronchoalveolar duct junction | 1.61e-08 | 2 |
alveolar duct | 1.61e-08 | 2 |
bronchiole | 1.61e-08 | 2 |
urinary bladder | 1.86e-08 | 2 |
lower urinary tract | 1.86e-08 | 2 |
thoracic cavity element | 6.20e-07 | 34 |
thoracic cavity | 6.20e-07 | 34 |
thoracic segment organ | 9.66e-07 | 35 |
Ontology term | p-value | n |
---|---|---|
squamous cell carcinoma | 9.52e-10 | 14 |
melanoma | 1.20e-08 | 2 |
lung adenocarcinoma | 1.61e-08 | 2 |