FFCP PHASE1:Hg19::chr1:25799275..25799284,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:25799275..25799284,+ | |||
|coexpression_cluster_id=C507 | |||
|description=CAGE_peak_at_chr1:25799275..25799284,+ | |description=CAGE_peak_at_chr1:25799275..25799284,+ | ||
|id=chr1:25799275..25799284,+ | |id=chr1:25799275..25799284,+ | ||
|ontology_enrichment_celltype=CL:0000945!4.84e-19!24;CL:0000826!4.84e-19!24;CL:0000838!7.72e-09!52;CL:0000542!1.13e-08!53;CL:0000051!1.13e-08!53 | |ontology_enrichment_celltype=CL:0000945!4.84e-19!24;CL:0000826!4.84e-19!24;CL:0000838!7.72e-09!52;CL:0000542!1.13e-08!53;CL:0000051!1.13e-08!53 | ||
|ontology_enrichment_celltype_v019=CL:0000945;6.56e-27;24!CL:0000542;2.66e-07;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000945,6.78e-27,24;CL:0000826,6.78e-27,24;CL:0000838,7.71e-13,52;CL:0000542,1.31e-12,53;CL:0000051,1.31e-12,53 | |||
|ontology_enrichment_development_v019=CL:0000051;2.66e-07;53!UBERON:0004872;5.22e-07;7 | |||
|ontology_enrichment_disease=DOID:0060058!2.92e-08!10 | |ontology_enrichment_disease=DOID:0060058!2.92e-08!10 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0004177!7.73e-24!7;UBERON:0002902!5.62e-19!1;UBERON:0009899!5.62e-19!1;UBERON:0002370!7.41e-19!4;UBERON:0005058!7.41e-19!4;UBERON:0009113!7.41e-19!4;UBERON:0003295!7.41e-19!4;UBERON:0005562!7.41e-19!4;UBERON:0003351!6.50e-13!6;UBERON:0003127!3.27e-10!2;UBERON:0000974!4.04e-08!10;UBERON:0003408!4.04e-08!10;UBERON:0001042!4.04e-08!10;UBERON:0009145!4.04e-08!10;UBERON:0002106!1.82e-07!3;UBERON:0004854!1.82e-07!3;UBERON:0009034!1.82e-07!3;UBERON:0002095!1.82e-07!3;UBERON:0004782!1.82e-07!3;UBERON:0003281!1.82e-07!3;UBERON:0009664!1.82e-07!3;UBERON:0002296!1.82e-07!3;UBERON:0005602!1.82e-07!3;UBERON:0001179!1.82e-07!3;UBERON:0006293!1.82e-07!3;UBERON:0006562!1.84e-07!11;UBERON:0009722!1.84e-07!11;UBERON:0007690!1.84e-07!11;UBERON:0005057!7.12e-07!26 | |||
|ontology_enrichment_uberon_v019=UBERON:0002106;1.31e-14;3!UBERON:0004177;2.63e-09;5!UBERON:0005057;2.63e-09;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002106,1.22e-14,3;UBERON:0004854,1.22e-14,3;UBERON:0009034,1.22e-14,3;UBERON:0002095,1.22e-14,3;UBERON:0004782,1.22e-14,3;UBERON:0003281,1.22e-14,3;UBERON:0009664,1.22e-14,3;UBERON:0002296,1.22e-14,3;UBERON:0005602,1.22e-14,3;UBERON:0001179,1.22e-14,3;UBERON:0006293,1.22e-14,3;UBERON:0004177,5.08e-07,7;UBERON:0005057,5.08e-07,7 | |||
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|short_description=p@chr1:25799275..25799284,+ | |short_description=p@chr1:25799275..25799284,+ | ||
}} | }} |
Latest revision as of 06:26, 28 July 2015
Short description: | p@chr1:25799275..25799284, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:25799275..25799284, + |
Coexpression cluster: | C507_splenic_hairy_b_cord_B_xeroderma_mycosis |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
lymphocyte of B lineage | 6.78e-27 | 24 |
pro-B cell | 6.78e-27 | 24 |
lymphoid lineage restricted progenitor cell | 7.71e-13 | 52 |
lymphocyte | 1.31e-12 | 53 |
common lymphoid progenitor | 1.31e-12 | 53 |
Ontology term | p-value | n |
---|---|---|
spleen | 1.22e-14 | 3 |
gastrointestinal system mesentery | 1.22e-14 | 3 |
stomach region | 1.22e-14 | 3 |
mesentery | 1.22e-14 | 3 |
gastrointestinal system serosa | 1.22e-14 | 3 |
mesentery of stomach | 1.22e-14 | 3 |
gut mesentery | 1.22e-14 | 3 |
dorsal mesentery | 1.22e-14 | 3 |
dorsal mesogastrium | 1.22e-14 | 3 |
peritoneal cavity | 1.22e-14 | 3 |
spleen primordium | 1.22e-14 | 3 |
hemopoietic organ | 5.08e-07 | 7 |
immune organ | 5.08e-07 | 7 |