FFCP PHASE1:Hg19::chr1:248020627..248020645,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=25893 | |EntrezGene=25893 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24150 | |HGNC=24150 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=8bp_to_AK096188_5end | |association_with_transcript=8bp_to_AK096188_5end | ||
|cluster_id=chr1:248020627..248020645,+ | |||
|coexpression_cluster_id=C3960 | |||
|description=CAGE_peak_4_at_TRIM58_5end | |description=CAGE_peak_4_at_TRIM58_5end | ||
|id=chr1:248020627..248020645,+ | |id=chr1:248020627..248020645,+ | ||
|ontology_enrichment_celltype=CL:0000077!8.72e-19!19 | |ontology_enrichment_celltype=CL:0000077!8.72e-19!19 | ||
|ontology_enrichment_celltype_v019=CL:0000077;1.27e-30;19!CL:0002541;3.22e-13;3!CL:0000764;4.34e-10;2!CL:0000558;4.34e-10;2!CL:0000174;9.54e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000077,1.67e-30,19;CL:0002541,2.78e-13,3;CL:0000764,4.34e-10,2;CL:0000765,4.34e-10,2;CL:0000050,4.34e-10,2;CL:0000038,4.34e-10,2;CL:0000558,4.34e-10,2;CL:0000547,4.34e-10,2;CL:0000549,4.34e-10,2;CL:0000550,4.34e-10,2;CL:0000552,4.34e-10,2;CL:0000213,2.70e-08,58;CL:0000215,2.70e-08,58;CL:0000076,1.90e-07,63 | |||
|ontology_enrichment_development_v019=UBERON:0007123;1.47e-14;5 | |||
|ontology_enrichment_disease=DOID:8692!2.18e-07!31 | |ontology_enrichment_disease=DOID:8692!2.18e-07!31 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000178!3.94e-13!15;UBERON:0000179!3.94e-13!15;UBERON:0000463!3.94e-13!15;UBERON:0007023!6.78e-07!115 | |||
|ontology_enrichment_uberon_v019=UBERON:0000178;1.36e-17;15!UBERON:0000179;1.36e-17;15!UBERON:0000463;1.36e-17;15!UBERON:0002046;1.47e-14;5!UBERON:0003124;3.22e-13;3!UBERON:0000920;3.22e-13;3!UBERON:0002390;4.97e-09;32!UBERON:0002368;8.01e-07;33 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0000178,1.04e-17,15;UBERON:0000179,1.04e-17,15;UBERON:0000463,1.04e-17,15;UBERON:0002046,1.50e-14,5;UBERON:0004117,1.50e-14,5;UBERON:0007689,1.50e-14,5;UBERON:0007123,1.50e-14,5;UBERON:0003091,1.50e-14,5;UBERON:0000920,2.78e-13,3;UBERON:0003124,9.73e-10,7;UBERON:0002368,9.87e-07,35 | |||
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| ||
|short_description=p4@TRIM58 | |short_description=p4@TRIM58 | ||
}} | }} |
Latest revision as of 00:30, 17 September 2015
Short description: | p4@TRIM58 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_TRIM58_5end |
Coexpression cluster: | C3960_mesothelioma_cholangiocellular_Reticulocytes_thyroid_granulosa_papillary_Whole |
Association with transcript: | 8bp_to_AK096188_5end |
EntrezGene: | TRIM58 |
HGNC: | 24150 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mesothelial cell | 1.67e-30 | 19 |
chorionic membrane mesenchymal stem cell | 2.78e-13 | 3 |
erythroid lineage cell | 4.34e-10 | 2 |
erythroblast | 4.34e-10 | 2 |
megakaryocyte-erythroid progenitor cell | 4.34e-10 | 2 |
erythroid progenitor cell | 4.34e-10 | 2 |
reticulocyte | 4.34e-10 | 2 |
proerythroblast | 4.34e-10 | 2 |
basophilic erythroblast | 4.34e-10 | 2 |
polychromatophilic erythroblast | 4.34e-10 | 2 |
orthochromatic erythroblast | 4.34e-10 | 2 |
lining cell | 2.70e-08 | 58 |
barrier cell | 2.70e-08 | 58 |
squamous epithelial cell | 1.90e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood | 1.04e-17 | 15 |
haemolymphatic fluid | 1.04e-17 | 15 |
organism substance | 1.04e-17 | 15 |
thyroid gland | 1.50e-14 | 5 |
pharyngeal pouch | 1.50e-14 | 5 |
thyroid diverticulum | 1.50e-14 | 5 |
pharyngeal pouch 2 | 1.50e-14 | 5 |
thyroid primordium | 1.50e-14 | 5 |
egg chorion | 2.78e-13 | 3 |
chorion | 9.73e-10 | 7 |
endocrine gland | 9.87e-07 | 35 |