FFCP PHASE1:Hg19::chr5:121647446..121647460,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=9627 | |EntrezGene=9627 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=11139 | |HGNC=11139 | ||
|TSSclassifier=strong | |||
|UniProt=D6RBR2 | |UniProt=D6RBR2 | ||
|association_with_transcript=0bp_to_ENST00000508681_5end | |association_with_transcript=0bp_to_ENST00000508681_5end | ||
|cluster_id=chr5:121647446..121647460,+ | |||
|description=CAGE_peak_4_at_SNCAIP_5end | |description=CAGE_peak_4_at_SNCAIP_5end | ||
|id=chr5:121647446..121647460,+ | |id=chr5:121647446..121647460,+ | ||
|ontology_enrichment_celltype=CL:0002319!9.04e-10!25;CL:0002139!4.63e-08!24;CL:0000047!2.14e-07!8 | |ontology_enrichment_celltype=CL:0002319!9.04e-10!25;CL:0002139!4.63e-08!24;CL:0000047!2.14e-07!8 | ||
|ontology_enrichment_celltype_v019=CL:0000047;1.42e-11;2!CL:0002138;2.73e-08;6!CL:0000540;4.18e-08;6!CL:0000404;4.18e-08;6!CL:0002504;1.19e-07;3!CL:1000279;1.19e-07;3!CL:1000280;1.19e-07;3!CL:0002139;3.50e-07;24 | |||
|ontology_enrichment_celltype_v019_2=CL:0000047,7.87e-16,8;CL:0005020,2.02e-08,6;CL:0002138,2.02e-08,6;CL:0005022,2.02e-08,6;CL:0000540,3.70e-08,6;CL:0000031,3.70e-08,6;CL:0000404,3.70e-08,6;CL:0002504,1.46e-07,3;CL:1000279,1.46e-07,3;CL:1000280,1.46e-07,3;CL:0002139,3.38e-07,24 | |||
|ontology_enrichment_development_v019=CL:0005022;2.73e-08;6!CL:0000031;4.18e-08;6!UBERON:0010115;9.65e-07;1 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:6193;5.88e-07;1 | |||
|ontology_enrichment_disease_v019_2=DOID:6193,5.90e-07,1 | |||
|ontology_enrichment_uberon=UBERON:0001017!3.65e-18!82;UBERON:0007023!8.61e-18!115;UBERON:0005743!9.27e-18!86;UBERON:0000073!2.06e-15!94;UBERON:0001016!2.06e-15!94;UBERON:0001049!4.67e-14!57;UBERON:0005068!4.67e-14!57;UBERON:0006241!4.67e-14!57;UBERON:0007135!4.67e-14!57;UBERON:0002616!3.27e-12!59;UBERON:0000955!3.68e-12!69;UBERON:0006238!3.68e-12!69;UBERON:0003075!4.80e-12!86;UBERON:0007284!4.80e-12!86;UBERON:0001893!6.63e-12!34;UBERON:0004121!1.32e-11!169;UBERON:0003080!1.55e-11!42;UBERON:0002791!2.01e-11!33;UBERON:0002346!5.62e-11!90;UBERON:0001869!5.67e-11!32;UBERON:0002020!6.13e-11!34;UBERON:0003528!6.13e-11!34;UBERON:0000924!6.22e-11!173;UBERON:0006601!6.22e-11!173;UBERON:0002780!8.73e-11!41;UBERON:0001890!8.73e-11!41;UBERON:0006240!8.73e-11!41;UBERON:0000477!3.44e-10!286;UBERON:0004111!5.97e-10!241;UBERON:0000153!8.92e-10!129;UBERON:0007811!8.92e-10!129;UBERON:0000033!4.98e-09!123;UBERON:0003056!6.28e-08!61;UBERON:0000468!2.30e-07!659;UBERON:0000956!3.07e-07!25;UBERON:0000203!3.07e-07!25 | |||
|ontology_enrichment_uberon_v019=UBERON:0002360;1.95e-11;2!UBERON:0000094;1.95e-11;2!UBERON:0010743;1.95e-11;2!UBERON:0005383;1.19e-07;3!UBERON:0005382;1.19e-07;3!UBERON:0005795;5.57e-07;1!UBERON:0002363;9.65e-07;1 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002360,3.12e-11,2;UBERON:0000094,3.12e-11,2;UBERON:0010743,3.12e-11,2;UBERON:0005383,9.72e-08,3;UBERON:0005382,9.72e-08,3 | |||
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| ||
|short_description=p4@SNCAIP | |short_description=p4@SNCAIP | ||
}} | }} |
Latest revision as of 23:34, 19 September 2015
Short description: | p4@SNCAIP |
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Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_SNCAIP_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000508681_5end |
EntrezGene: | SNCAIP |
HGNC: | 11139 |
UniProt: | D6RBR2 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neuronal stem cell | 7.87e-16 | 8 |
lymphangioblast | 2.02e-08 | 6 |
endothelial cell of lymphatic vessel | 2.02e-08 | 6 |
vascular lymphangioblast | 2.02e-08 | 6 |
neuron | 3.70e-08 | 6 |
neuroblast | 3.70e-08 | 6 |
electrically signaling cell | 3.70e-08 | 6 |
enteric smooth muscle cell | 1.46e-07 | 3 |
smooth muscle cell of large intestine | 1.46e-07 | 3 |
smooth muscle cell of colon | 1.46e-07 | 3 |
endothelial cell of vascular tree | 3.38e-07 | 24 |
Ontology term | p-value | n |
---|---|---|
meninx | 3.12e-11 | 2 |
membrane organ | 3.12e-11 | 2 |
meningeal cluster | 3.12e-11 | 2 |
caudate-putamen | 9.72e-08 | 3 |
dorsal striatum | 9.72e-08 | 3 |
Ontology term | p-value | n |
---|---|---|
epithelioid sarcoma | 5.90e-07 | 1 |