FFCP PHASE1:Hg19::chr1:215178832..215178850,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=3776 | |EntrezGene=3776 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6277 | |HGNC=6277 | ||
|TSSclassifier=strong | |||
|UniProt=O95069,Q6ZW95 | |UniProt=O95069,Q6ZW95 | ||
|association_with_transcript=-34bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | |association_with_transcript=-34bp_to_NM_001017424,uc001hko.2,uc001hkp.2,uc009xdm.2_5end | ||
|cluster_id=chr1:215178832..215178850,+ | |||
|coexpression_cluster_id=C633 | |||
|description=CAGE_peak_16_at_KCNK2_5end | |description=CAGE_peak_16_at_KCNK2_5end | ||
|id=chr1:215178832..215178850,+ | |id=chr1:215178832..215178850,+ | ||
|ontology_enrichment_celltype=CL:0000057!2.21e-36!75;CL:0002620!1.03e-23!23;CL:0000055!1.42e-20!180;CL:0002334!1.28e-12!12;CL:1000306!1.10e-07!4;CL:0002547!1.10e-07!4;CL:0000134!1.39e-07!358;CL:0002556!1.56e-07!6;CL:0002552!1.63e-07!5;CL:0000048!2.35e-07!430;CL:0002320!4.27e-07!365;CL:0000723!5.62e-07!436 | |ontology_enrichment_celltype=CL:0000057!2.21e-36!75;CL:0002620!1.03e-23!23;CL:0000055!1.42e-20!180;CL:0002334!1.28e-12!12;CL:1000306!1.10e-07!4;CL:0002547!1.10e-07!4;CL:0000134!1.39e-07!358;CL:0002556!1.56e-07!6;CL:0002552!1.63e-07!5;CL:0000048!2.35e-07!430;CL:0002320!4.27e-07!365;CL:0000723!5.62e-07!436 | ||
|ontology_enrichment_celltype_v019=CL:0002620;1.74e-13;23!CL:1000306;1.86e-12;4!CL:0002547;1.86e-12;4!CL:0000057;3.78e-10;73!CL:0000197;3.81e-09;6!CL:0000098;3.81e-09;6!CL:0002167;3.81e-09;6!CL:0002556;9.45e-09;6!CL:0000346;3.67e-08;3!CL:1000428;3.67e-08;3!CL:0000135;4.71e-08;3!CL:0002580;4.71e-08;3!CL:0000388;4.71e-08;3!CL:0000228;7.59e-07;1!CL:0002372;7.59e-07;1 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,2.17e-23,76;CL:0002620,1.47e-13,23;CL:1000306,2.66e-12,4;CL:0002547,2.66e-12,4;CL:0000197,3.67e-09,6;CL:0000098,3.67e-09,6;CL:0002167,3.67e-09,6;CL:0002556,8.40e-09,6;CL:0002580,2.76e-08,3;CL:0000135,3.82e-08,3;CL:0000388,3.82e-08,3;CL:0000346,4.10e-08,3;CL:1000428,4.10e-08,3;CL:0000228,6.08e-07,1;CL:0002372,6.08e-07,1 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:17!6.46e-09!5;DOID:450!6.46e-09!5;DOID:66!6.46e-09!5;DOID:423!6.46e-09!5;DOID:0080000!6.46e-09!5;DOID:11722!6.46e-09!5 | |ontology_enrichment_disease=DOID:17!6.46e-09!5;DOID:450!6.46e-09!5;DOID:66!6.46e-09!5;DOID:423!6.46e-09!5;DOID:0080000!6.46e-09!5;DOID:11722!6.46e-09!5 | ||
|ontology_enrichment_disease_v019=DOID:17;4.60e-10;5!DOID:450;4.60e-10;5!DOID:66;4.60e-10;5!DOID:423;4.60e-10;5!DOID:0080000;4.60e-10;5!DOID:11722;4.60e-10;5!DOID:1192;8.27e-08;3 | |||
|ontology_enrichment_disease_v019_2=DOID:17,4.76e-10,5;DOID:450,4.76e-10,5;DOID:66,4.76e-10,5;DOID:423,4.76e-10,5;DOID:0080000,4.76e-10,5;DOID:11722,4.76e-10,5;DOID:1192,5.44e-08,3 | |||
|ontology_enrichment_uberon=UBERON:0002199!3.28e-21!45;UBERON:0002416!3.28e-21!45;UBERON:0002097!3.98e-21!40;UBERON:0003102!6.34e-21!95;UBERON:0002384!3.45e-08!375;UBERON:0000415!1.10e-07!4;UBERON:0007240!1.10e-07!4;UBERON:0005742!1.10e-07!4;UBERON:0005734!1.10e-07!4;UBERON:0004664!1.10e-07!4;UBERON:0004663!1.10e-07!4;UBERON:0000475!1.31e-07!365;UBERON:0002067!1.31e-07!9;UBERON:0004016!1.31e-07!9;UBERON:0010083!1.31e-07!9;UBERON:0001758!1.56e-07!6;UBERON:0003672!1.56e-07!6 | |ontology_enrichment_uberon=UBERON:0002199!3.28e-21!45;UBERON:0002416!3.28e-21!45;UBERON:0002097!3.98e-21!40;UBERON:0003102!6.34e-21!95;UBERON:0002384!3.45e-08!375;UBERON:0000415!1.10e-07!4;UBERON:0007240!1.10e-07!4;UBERON:0005742!1.10e-07!4;UBERON:0005734!1.10e-07!4;UBERON:0004664!1.10e-07!4;UBERON:0004663!1.10e-07!4;UBERON:0000475!1.31e-07!365;UBERON:0002067!1.31e-07!9;UBERON:0004016!1.31e-07!9;UBERON:0010083!1.31e-07!9;UBERON:0001758!1.56e-07!6;UBERON:0003672!1.56e-07!6 | ||
|ontology_enrichment_uberon_v019=UBERON:0004797;1.86e-12;4!UBERON:0000415;1.86e-12;4!UBERON:0007240;1.86e-12;4!UBERON:0005742;1.86e-12;4!UBERON:0005734;1.86e-12;4!UBERON:0004664;1.86e-12;4!UBERON:0004663;1.86e-12;4!UBERON:0002097;4.73e-11;41!UBERON:0002199;4.72e-09;46!UBERON:0002416;4.72e-09;46!UBERON:0001758;9.45e-09;6!UBERON:0003672;9.45e-09;6!UBERON:0000412;3.67e-08;3!UBERON:0001992;3.67e-08;3!UBERON:0007846;4.71e-08;3!UBERON:0000043;4.71e-08;3!UBERON:0007845;4.71e-08;3!UBERON:0011137;5.38e-08;11!UBERON:0010323;5.38e-08;11!UBERON:0003129;1.47e-07;7!UBERON:0003102;4.92e-07;50 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002097,1.82e-13,41;UBERON:0000415,2.66e-12,4;UBERON:0007240,2.66e-12,4;UBERON:0005742,2.66e-12,4;UBERON:0005734,2.66e-12,4;UBERON:0004664,2.66e-12,4;UBERON:0004663,2.66e-12,4;UBERON:0002199,8.94e-12,46;UBERON:0002416,8.94e-12,46;UBERON:0003102,1.14e-11,99;UBERON:0001758,8.40e-09,6;UBERON:0003672,8.40e-09,6;UBERON:0007846,3.82e-08,3;UBERON:0000043,3.82e-08,3;UBERON:0007845,3.82e-08,3;UBERON:0000412,4.10e-08,3;UBERON:0001992,4.10e-08,3;UBERON:0010323,4.96e-08,11;UBERON:0003129,1.33e-07,7;UBERON:0004797,3.15e-07,7 | |||
|phase1_expression=3.27021082687002,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0.662045904066094,2.29469296599051,1.41867352879343,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0,0.61246251376468,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0,0.831192346452549,2.63386572528503,4.59731693698529,1.50238058906597,0,1.79389635688862,2.56268866582281,0.847727604638247,0.300091096084402,1.13357782162283,0.257640540045629,0.18611685633159,2.70042131586026,1.16924406193438,1.7670364197088,1.65689817556139,0.80823028409406,2.84007674013291,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,8.3861624734666,4.73107245101804,3.98280810975225,0.300946099727719,0,0,0.664225598535437,0.184369168541703,1.04260337361699,0,0,0,0,0,0,0,0,2.97729369382532,1.99500565274481,0.841980283299221,0.768834895534206,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.492762936082855,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.676695028044854,0,0,0,0.214840489736547,0,0,0.534192213880424,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0.227884111694002,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,2.21922344601045,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,2.40376993627955,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,1.41070377476274,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,2.60396512716726,0,1.73050624849516,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0,0,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | |phase1_expression=3.27021082687002,0.642301571672949,0.422863212287913,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.49091585508596,1.13967460498122,0.662045904066094,2.29469296599051,1.41867352879343,0,0,0,0,0,0,0,0,0,0.312160076830321,0.570471821544449,0.149448680551801,0.117434498643765,0.161872944368132,0,0.61246251376468,0.122834317311768,0.206651562351531,1.18800285728205,0.247266929278557,0,0,0.336672227908132,0,0.831192346452549,2.63386572528503,4.59731693698529,1.50238058906597,0,1.79389635688862,2.56268866582281,0.847727604638247,0.300091096084402,1.13357782162283,0.257640540045629,0.18611685633159,2.70042131586026,1.16924406193438,1.7670364197088,1.65689817556139,0.80823028409406,2.84007674013291,0.705264687593482,0.339121184620975,0,0,0,0,0,0,0,0,0,3.12899064659632,1.28648187638577,0,0.464367928031979,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.325808305310325,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.144119953416961,0,0,0,0,0,0,0,0,0,0.43596006883328,0.07333828582095,0,0,0,0.531876233169741,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.85273810081437,0.289562613335158,0,0.358121926479791,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.623912584592421,8.3861624734666,4.73107245101804,3.98280810975225,0.300946099727719,0,0,0.664225598535437,0.184369168541703,1.04260337361699,0,0,0,0,0,0,0,0,2.97729369382532,1.99500565274481,0.841980283299221,0.768834895534206,1.02341449813341,0.482561763430822,0,0.308419387605311,0.710246901252508,0.492762936082855,0,0.697262270759755,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.574265537996172,0,0,0.676695028044854,0,0,0,0.214840489736547,0,0,0.534192213880424,0,0,0,0,0.464845549297286,0,0,0,0,0,0.18532421910392,0,0,0,0,0,0,0.636406495851874,0,0,0,0,0,0,0,0,0.243713489631284,0,0.136499911407986,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.422215270595328,0.329294892959902,0.379473173765715,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.24415835064723,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.438770794307945,0,0,0.230850775511391,0.227884111694002,0,0,0,0,1.28236630762607,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.067401132980677,0,0,0,0.19566461893209,0,0,0,0,0.379119477770928,0,0,0,0,0,0,0,0,0,0,0,0.34945333648406,0,0,0,0,0,0,0,0,0,0.0633107959558787,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.121499113316049,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.679872549120754,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.327872630709804,0,0,0,0,0,0.110929051536852,0.0620964029413835,0,0,0,0,0,0,0,0.895528817321244,2.10341978862502,2.21922344601045,0.189403005275089,0.50313580350515,0,0,0,0,0,0,0,0.155262956876259,0,0,0,0,0,0,0,0.107410557042488,0.464033759878494,0,0,2.40376993627955,0.673498977531838,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.90802610392051,0,0,1.41070377476274,0,0,0,0,0,0,0.0691572524642179,0,0,0,0,0,0,0,0,0.795664888465099,0,0,0,0,0,0,0,0,0,0,0,0,1.48863353516788,0,0,0,0,0.606965604236632,0,0,0,0.514464028312255,0,0,0,0,0,0,0.280272163313789,0,0,0,0,0,0.581207126840626,0,0,0,0,0,0,0.118332000730565,0.170426809518315,0,0,0,0,0,0,0,0,0,0,0.971421986118279,0,0,0,0,0,0,0,0,0,0,0,0.196308467114945,0,0,0.339854229375634,0,0,0,0,0,0,0,0,0,0,0.0679914901909147,0,0,2.60396512716726,0,1.73050624849516,0,0,0.126698501011437,0,0,0.0918948995348449,0,0.0757786982182394,0,0,0,0.426467963801962,0,0.0645889098360061,0,0,0.0636471582781649,0,0.870866991587845,0.342233301085281,0,0,0,0,0,0,0,0,0,0,1.33151354837103,0,0 | ||
|short_description=p16@KCNK2 | |short_description=p16@KCNK2 | ||
}} | }} |
Latest revision as of 02:20, 25 September 2015
Short description: | p16@KCNK2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_KCNK2_5end |
Coexpression cluster: | C633_Olfactory_Fibroblast_Preadipocyte_Hair_tenocyte_mesenchymal_basal |
Association with transcript: | -34bp_to_NM_001017424, uc001hko.2, uc001hkp.2, uc009xdm.2_5end |
EntrezGene: | KCNK2 |
HGNC: | 6277 |
UniProt: | O95069Q6ZW95 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 2.17e-23 | 76 |
skin fibroblast | 1.47e-13 | 23 |
fibroblast of tunica adventitia of artery | 2.66e-12 | 4 |
fibroblast of the aortic adventitia | 2.66e-12 | 4 |
receptor cell | 3.67e-09 | 6 |
sensory epithelial cell | 3.67e-09 | 6 |
olfactory epithelial cell | 3.67e-09 | 6 |
fibroblast of periodontium | 8.40e-09 | 6 |
preadipocyte of the breast | 2.76e-08 | 3 |
fibrocyte | 3.82e-08 | 3 |
tendon cell | 3.82e-08 | 3 |
hair follicle dermal papilla cell | 4.10e-08 | 3 |
stem cell of epidermis | 4.10e-08 | 3 |
multinucleate cell | 6.08e-07 | 1 |
myotube | 6.08e-07 | 1 |
Ontology term | p-value | n |
---|---|---|
skin of body | 1.82e-13 | 41 |
artery wall | 2.66e-12 | 4 |
tunica adventitia of artery | 2.66e-12 | 4 |
adventitia | 2.66e-12 | 4 |
tunica adventitia of blood vessel | 2.66e-12 | 4 |
aorta tunica adventitia | 2.66e-12 | 4 |
aorta wall | 2.66e-12 | 4 |
integument | 8.94e-12 | 46 |
integumental system | 8.94e-12 | 46 |
surface structure | 1.14e-11 | 99 |
periodontium | 8.40e-09 | 6 |
dentition | 8.40e-09 | 6 |
dense regular connective tissue | 3.82e-08 | 3 |
tendon | 3.82e-08 | 3 |
regular connective tissue | 3.82e-08 | 3 |
dermal papilla | 4.10e-08 | 3 |
papillary layer of dermis | 4.10e-08 | 3 |
cranial skeletal system | 4.96e-08 | 11 |
skull | 1.33e-07 | 7 |
blood vessel layer | 3.15e-07 | 7 |
Ontology term | p-value | n |
---|---|---|
musculoskeletal system disease | 4.76e-10 | 5 |
myotonic disease | 4.76e-10 | 5 |
muscle tissue disease | 4.76e-10 | 5 |
myopathy | 4.76e-10 | 5 |
muscular disease | 4.76e-10 | 5 |
myotonic dystrophy | 4.76e-10 | 5 |
peripheral nervous system neoplasm | 5.44e-08 | 3 |