FFCP PHASE1:Hg19::chr5:121412666..121412683,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=4015 | |EntrezGene=4015 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=6664 | |HGNC=6664 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=122bp_to_uc011cwk.1_5end | |association_with_transcript=122bp_to_uc011cwk.1_5end | ||
|cluster_id=chr5:121412666..121412683,- | |||
|coexpression_cluster_id=C421 | |||
|description=CAGE_peak_9_at_LOX_5end | |description=CAGE_peak_9_at_LOX_5end | ||
|id=chr5:121412666..121412683,- | |id=chr5:121412666..121412683,- | ||
|ontology_enrichment_celltype=CL:0000055!1.77e-39!180;CL:0000057!3.65e-28!75;CL:0000680!2.37e-17!57;CL:0000056!2.37e-17!57;CL:0000355!2.37e-17!57;CL:0000187!9.82e-16!54;CL:0000183!2.48e-14!59;CL:0000222!6.92e-14!119;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000192!6.82e-13!42;CL:0000514!6.82e-13!42;CL:0000359!1.30e-12!32;CL:0002620!3.64e-12!23;CL:0000048!3.93e-12!430;CL:0000723!8.39e-12!436;CL:0000034!3.30e-11!444;CL:0000144!7.16e-11!625;CL:0002334!2.10e-10!12;CL:0002371!2.38e-09!591;CL:0000548!1.30e-08!679;CL:0000004!1.30e-08!679;CL:0000255!1.30e-08!679;CL:0000012!2.93e-08!682;CL:0002494!2.91e-07!16 | |ontology_enrichment_celltype=CL:0000055!1.77e-39!180;CL:0000057!3.65e-28!75;CL:0000680!2.37e-17!57;CL:0000056!2.37e-17!57;CL:0000355!2.37e-17!57;CL:0000187!9.82e-16!54;CL:0000183!2.48e-14!59;CL:0000222!6.92e-14!119;CL:0000393!1.74e-13!60;CL:0000211!1.74e-13!60;CL:0000192!6.82e-13!42;CL:0000514!6.82e-13!42;CL:0000359!1.30e-12!32;CL:0002620!3.64e-12!23;CL:0000048!3.93e-12!430;CL:0000723!8.39e-12!436;CL:0000034!3.30e-11!444;CL:0000144!7.16e-11!625;CL:0002334!2.10e-10!12;CL:0002371!2.38e-09!591;CL:0000548!1.30e-08!679;CL:0000004!1.30e-08!679;CL:0000255!1.30e-08!679;CL:0000012!2.93e-08!682;CL:0002494!2.91e-07!16 | ||
|ontology_enrichment_celltype_v019=CL:0002334;1.06e-15;12!CL:0002620;5.28e-15;23!CL:0000057;5.68e-11;73!CL:0000359;3.04e-09;32!CL:0002539;5.88e-09;10!CL:0000192;7.87e-09;43!CL:0000134;9.95e-08;55!CL:0002320;1.91e-07;188!CL:0000048;7.68e-07;58 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,1.09e-29,76;CL:0000048,3.43e-17,427;CL:0000723,1.73e-16,433;CL:0002334,1.37e-15,12;CL:0000034,1.39e-15,441;CL:0002620,7.37e-15,23;CL:0000680,7.79e-12,58;CL:0000056,7.79e-12,58;CL:0000355,7.79e-12,58;CL:0000192,2.83e-11,43;CL:0000514,2.83e-11,43;CL:0000187,6.06e-10,55;CL:0000359,2.30e-09,32;CL:0000393,5.32e-09,61;CL:0000211,5.32e-09,61;CL:0002539,6.95e-09,10;CL:0000134,2.57e-08,354;CL:0000222,4.31e-08,121;CL:0002320,9.76e-08,361 | |||
|ontology_enrichment_development_v019=CL:0000514;7.87e-09;43!CL:0000355;9.71e-07;58 | |||
|ontology_enrichment_disease=DOID:2394!1.80e-08!14 | |||
|ontology_enrichment_disease_v019=DOID:2394;5.58e-13;14!DOID:17;1.73e-07;5!DOID:450;1.73e-07;5!DOID:66;1.73e-07;5!DOID:423;1.73e-07;5!DOID:0080000;1.73e-07;5!DOID:11722;1.73e-07;5 | |||
|ontology_enrichment_disease_v019_2=DOID:2394,6.87e-13,14;DOID:17,1.76e-07,5;DOID:450,1.76e-07,5;DOID:66,1.76e-07,5;DOID:423,1.76e-07,5;DOID:0080000,1.76e-07,5;DOID:11722,1.76e-07,5 | |||
|ontology_enrichment_uberon=UBERON:0004290!4.43e-16!70;UBERON:0000914!9.31e-16!83;UBERON:0002329!9.31e-16!83;UBERON:0003077!9.31e-16!83;UBERON:0003059!9.31e-16!83;UBERON:0007282!9.31e-16!83;UBERON:0009618!9.31e-16!83;UBERON:0007285!9.31e-16!83;UBERON:0001134!4.55e-15!61;UBERON:0002036!4.55e-15!61;UBERON:0003082!4.55e-15!61;UBERON:0002385!4.72e-14!63;UBERON:0001015!4.72e-14!63;UBERON:0000383!4.72e-14!63;UBERON:0002049!9.41e-14!79;UBERON:0007798!9.41e-14!79;UBERON:0004872!1.06e-13!84;UBERON:0000486!2.14e-13!82;UBERON:0004535!1.35e-12!110;UBERON:0001009!1.08e-11!113;UBERON:0001637!1.47e-11!42;UBERON:0003509!1.47e-11!42;UBERON:0004572!1.47e-11!42;UBERON:0000055!6.26e-11!69;UBERON:0005256!1.04e-10!143;UBERON:0001981!1.40e-10!60;UBERON:0007500!1.40e-10!60;UBERON:0004537!1.40e-10!60;UBERON:0006965!1.40e-10!60;UBERON:0003914!2.40e-09!118;UBERON:0002100!1.27e-08!216;UBERON:0004573!2.14e-08!33;UBERON:0004571!2.14e-08!33;UBERON:0000490!4.77e-08!138;UBERON:0002199!6.14e-08!45;UBERON:0002416!6.14e-08!45;UBERON:0002097!2.23e-07!40 | |||
|ontology_enrichment_uberon_v019=UBERON:0004457;4.48e-10;9!UBERON:0000042;4.48e-10;9!UBERON:0004573;1.16e-09;33!UBERON:0004571;1.16e-09;33!UBERON:0001135;2.19e-09;15!UBERON:0003688;5.50e-09;6!UBERON:0002358;5.50e-09;6!UBERON:0003684;5.50e-09;6!UBERON:0001178;5.50e-09;6!UBERON:0004237;5.88e-09;10!UBERON:0004695;5.88e-09;10!UBERON:0002111;5.88e-09;10!UBERON:0004178;5.88e-09;10!UBERON:0001637;6.30e-09;42!UBERON:0003509;6.30e-09;42!UBERON:0004572;6.30e-09;42!UBERON:0002097;1.94e-08;41!UBERON:0002199;2.45e-08;46!UBERON:0002416;2.45e-08;46!UBERON:0000947;8.01e-08;21!UBERON:0010191;8.01e-08;21!UBERON:0002384;1.22e-07;198!UBERON:0002118;9.20e-07;5 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001637,4.20e-12,42;UBERON:0003509,4.20e-12,42;UBERON:0004572,4.20e-12,42;UBERON:0002199,8.50e-12,46;UBERON:0002416,8.50e-12,46;UBERON:0002097,2.33e-11,41;UBERON:0002329,2.79e-11,71;UBERON:0003059,2.79e-11,71;UBERON:0007282,2.79e-11,71;UBERON:0004290,2.79e-11,71;UBERON:0009618,2.79e-11,71;UBERON:0003077,5.42e-11,72;UBERON:0007285,5.42e-11,72;UBERON:0007524,1.03e-10,73;UBERON:0004573,1.08e-10,33;UBERON:0004571,1.08e-10,33;UBERON:0001134,1.60e-10,62;UBERON:0002036,1.60e-10,62;UBERON:0003082,1.60e-10,62;UBERON:0000486,4.70e-10,83;UBERON:0002385,6.22e-10,64;UBERON:0001015,6.22e-10,64;UBERON:0000383,6.22e-10,64;UBERON:0007503,1.95e-09,78;UBERON:0001135,2.88e-09,15;UBERON:0003688,6.56e-09,6;UBERON:0002358,6.56e-09,6;UBERON:0003684,6.56e-09,6;UBERON:0001178,6.56e-09,6;UBERON:0004237,6.95e-09,10;UBERON:0004695,6.95e-09,10;UBERON:0002111,6.95e-09,10;UBERON:0004178,6.95e-09,10;UBERON:0004872,4.54e-08,83;UBERON:0000947,8.60e-08,21;UBERON:0010191,8.60e-08,21;UBERON:0002384,2.17e-07,371;UBERON:0007500,2.29e-07,59;UBERON:0001981,2.29e-07,59;UBERON:0004537,2.29e-07,59;UBERON:0006965,2.29e-07,59;UBERON:0004457,5.13e-07,12;UBERON:0000042,5.13e-07,12;UBERON:0005256,6.69e-07,122;UBERON:0003102,8.67e-07,99 | |||
|phase1_expression=4.36028110249336,17.9844440068426,3.52386010239928,13.009528785907,9.38618298297304,13.0850778615055,0,0.631719873426831,0,0.245733936501509,0,0,0,0.618831764800233,0.662794751455832,4.03395087871065,1.20538905604795,3.65155045193687,2.43966399395253,0.246242116153576,0.612002073732759,0.940364164434263,0.572471974262113,0.821246550437305,0.627713197974014,0,0,0,0,0,0.154816123316076,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,2.68280343881454,0.767175371061182,0.722878304769133,0.50133791063589,6.37324683427624,0,0.486634870302636,0.283604451492204,1.77383517970051,1.05401742831751,0,0,0,0,0,0,0,0,0,0,0,0,0,1.25849830862972,1.10047216776027,0.208994966536811,0.258416759169329,0,0.66944122552934,0.402829317109147,0,0.976248230192678,0,0,0,0,0,0,0,0.183201743930407,0,0,0,5.96366342034382,3.16576279161449,3.83986624358335,19.2180535901705,3.90135220418193,1.68203280042692,2.1349799145941,3.94668077467456,0.622422070799533,0.808264032418128,0.490385709340376,0.151357427644931,0.576175924479999,0,0.624320153660641,0,0.896692083310806,1.64408298101271,2.26622122115384,1.68540968042698,0,0.368502951935304,0.206651562351531,1.18800285728205,3.95627086845691,0.910161361938026,0.718618141816238,0,0.375355559615893,0,1.75591048352335,5.51678032438235,2.40380894250555,0.226864366320042,10.0458195985763,4.05759038755278,3.39091041855299,10.5031883629541,2.47326070172253,11.0785432219621,3.16398655763703,5.23206629947925,6.13853132515551,6.56327813034698,2.02509777013059,2.42469085228218,14.9104028856978,2.01504196455281,1.18692414617341,0,0,0,0.121973706129595,0,0,0.10366105501537,0,0,0,1.92972281457866,0,3.71494342425583,6.49691533502627,0,0.337169380156203,0,0,0.217879444092406,0,0,0.392442930250692,0.38474715694639,0,1.40241773803446,0,2.94017422771084,0,0,0,0,0,1.02940686179115,0.109750285408626,0,0,0.0925884451585296,0,1.03993478527958,0,0,0.587043471179108,0.433099343283221,0,0.380508304469197,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0.102827492703324,0,0,0.336393253036082,0.43596006883328,0.22001485746285,2.84397774667111,0,0,1.59562869950922,2.08014873822732,0,1.41849132023278,0,2.85955987316295,0,0,0,2.13235169245527,0,2.41151501647669,1.74306691720059,4.1988656296464,0,0,0,1.4377491329495,5.7430967917057,0,4.92256442669769,2.4657158706046,1.07436577943937,0,0,0,0,0,0,1.54657762555539,0,0,0,0,0,0.858840442033979,0,0.542530047399471,3.53550464602372,14.4527480925701,3.15404830067869,2.45996971484698,1.20378439891088,0,0,0.664225598535437,0.921845842708516,1.47702144595741,0.195801157462741,0,0,0,0,0,0,0.30239029332968,7.19512642674453,2.60885354589706,15.436305193819,3.58789617915963,3.07024349440022,12.5466058492014,11.8734453155993,7.24785560872481,5.14929003408069,1.06765302817952,3.63478100428535,6.62399157221768,0,0.601519410909855,0,0.918515585316854,5.82691737621495,3.2781103739856,0,0,0,1.46139224653261,0.316654886678627,0,0.170093705276516,0,0,0,0,0,0,0,0,0,0,0,0.650756789328606,0,0,0.082509499920588,0,0,8.03419649220798,0.096670718292122,0.462145851343933,0.921022048356777,0.551346289938122,0.429680979473094,1.88521702088497,0.340906509664404,0.178064071293475,0,0,0,0,5.11330104227014,64.2217187534506,1.3940745403212,1.84820148105653,1.06461206063404,0,0.37064843820784,1.43124886741991,0.372158369359667,0.632758849437452,0.953150969619124,0,2.1396949401696,0.318203247925937,1.56989728039846,1.07923474549989,2.74537029736055,1.17812402345686,0.808729926293264,0,2.10629228119491,0,6.09283724078211,2.11300293513511,0.682499557039929,5.23200098228737,3.39024349860728,0,4.64407282668854,6.13831239355268,2.31510213706675,0,0.608731130888112,1.54911749049875,1.97186921772569,0.573645408816206,0.294747123039363,0.7133421029625,0,5.69990615303693,13.8303855043159,0,0.699869440489966,0,0,0,0.0941438007767792,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.293016358543788,0,0,0,0,0,0,0,0,1.00177834520615,0,0,0.796991953004279,0,0,0,0,7.15391051622157,0.0898683511473268,0,0,0.197286811273867,0,0,0,0,0,0,0,0.724999575434793,0,0,0,0,0,0.173624994933292,0,0,0,0,0,0,0.10893846351899,0.278847488557207,0,0.227884111694002,0,0,0,0,0.183195186803725,0,0,0,0,0,0,0,0,0,0,0.163232808159148,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.20990716048664,0,0.252746318513952,0,0.103688191397247,0,0,0,0,0,0,0,0,0,0.17472666824203,9.97518988335376,0.0967563312890851,0.0730893170861856,0.0821154570532092,0.0969890164884194,0,0.677942222341597,0.137041924646751,0,0,0,0,0,0.799238438328521,0,0,0,0,0,0,0,0,0.203996435272644,0.288950589901519,0,0,0,2.57859264851974,0,0.279282401272254,0,0.717873024576814,0,0,0,0.134366944973453,2.52209918479682,0,0.393915911536118,0.164831716762333,0.471824806979294,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0.633602019116439,0,0,0,0,0,16.8329876543651,12.0991008768177,13.063494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| ||
|short_description=p9@LOX | |short_description=p9@LOX | ||
}} | }} |
Latest revision as of 23:16, 19 September 2015
Short description: | p9@LOX |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_9_at_LOX_5end |
Coexpression cluster: | C421_Smooth_Fibroblast_epithelioid_hepatic_Sertoli_Ewing_tenocyte |
Association with transcript: | 122bp_to_uc011cwk.1_5end |
EntrezGene: | LOX |
HGNC: | 6664 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 1.09e-29 | 76 |
multi fate stem cell | 3.43e-17 | 427 |
somatic stem cell | 1.73e-16 | 433 |
preadipocyte | 1.37e-15 | 12 |
stem cell | 1.39e-15 | 441 |
skin fibroblast | 7.37e-15 | 23 |
muscle precursor cell | 7.79e-12 | 58 |
myoblast | 7.79e-12 | 58 |
multi-potent skeletal muscle stem cell | 7.79e-12 | 58 |
smooth muscle cell | 2.83e-11 | 43 |
smooth muscle myoblast | 2.83e-11 | 43 |
muscle cell | 6.06e-10 | 55 |
vascular associated smooth muscle cell | 2.30e-09 | 32 |
electrically responsive cell | 5.32e-09 | 61 |
electrically active cell | 5.32e-09 | 61 |
aortic smooth muscle cell | 6.95e-09 | 10 |
mesenchymal cell | 2.57e-08 | 354 |
mesodermal cell | 4.31e-08 | 121 |
connective tissue cell | 9.76e-08 | 361 |
Ontology term | p-value | n |
---|---|---|
ovarian cancer | 6.87e-13 | 14 |
musculoskeletal system disease | 1.76e-07 | 5 |
myotonic disease | 1.76e-07 | 5 |
muscle tissue disease | 1.76e-07 | 5 |
myopathy | 1.76e-07 | 5 |
muscular disease | 1.76e-07 | 5 |
myotonic dystrophy | 1.76e-07 | 5 |