FFCP PHASE1:Hg19::chr4:88901208..88901247,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6696 | |EntrezGene=6696 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=novel_coding | |||
|HGNC=11255 | |HGNC=11255 | ||
|TSSclassifier=strong | |||
|UniProt=F2YBS5 | |UniProt=F2YBS5 | ||
|association_with_transcript=-4bp_to_HQ874461_5end | |association_with_transcript=-4bp_to_HQ874461_5end | ||
|cluster_id=chr4:88901208..88901247,+ | |||
|coexpression_cluster_id=C455 | |||
|description=CAGE_peak_2_at_SPP1_5end | |description=CAGE_peak_2_at_SPP1_5end | ||
|id=chr4:88901208..88901247,+ | |id=chr4:88901208..88901247,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000235;1.22e-16;6!CL:0002149;8.90e-07;6!CL:0002255;8.90e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000235,1.26e-16,6;CL:0002149,8.39e-07,6;CL:0002255,8.39e-07,6 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:193!1.24e-07!29;DOID:120!1.39e-07!27 | |||
|ontology_enrichment_disease_v019=DOID:3001;8.90e-07;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,8.39e-07,6 | |||
|ontology_enrichment_uberon=UBERON:0001049!4.19e-26!57;UBERON:0005068!4.19e-26!57;UBERON:0006241!4.19e-26!57;UBERON:0007135!4.19e-26!57;UBERON:0007023!2.92e-24!115;UBERON:0001017!8.94e-22!82;UBERON:0005743!9.08e-21!86;UBERON:0003075!1.45e-20!86;UBERON:0007284!1.45e-20!86;UBERON:0002616!2.13e-20!59;UBERON:0003080!3.79e-20!42;UBERON:0000073!4.12e-20!94;UBERON:0001016!4.12e-20!94;UBERON:0002780!1.79e-19!41;UBERON:0001890!1.79e-19!41;UBERON:0006240!1.79e-19!41;UBERON:0002020!6.78e-19!34;UBERON:0003528!6.78e-19!34;UBERON:0002346!7.49e-19!90;UBERON:0001893!4.12e-18!34;UBERON:0002791!9.71e-18!33;UBERON:0003056!1.29e-16!61;UBERON:0001869!1.63e-16!32;UBERON:0000955!4.42e-16!69;UBERON:0006238!4.42e-16!69;UBERON:0000956!2.47e-13!25;UBERON:0000203!2.47e-13!25;UBERON:0002619!1.01e-11!22;UBERON:0000062!1.24e-10!511;UBERON:0001950!3.20e-10!20;UBERON:0004121!2.79e-09!169;UBERON:0000153!4.57e-09!129;UBERON:0007811!4.57e-09!129;UBERON:0002298!1.03e-08!8;UBERON:0000924!1.15e-08!173;UBERON:0006601!1.15e-08!173;UBERON:0000922!1.24e-08!612;UBERON:0000033!3.40e-08!123;UBERON:0000468!1.37e-07!659;UBERON:0003076!3.76e-07!15;UBERON:0003057!3.76e-07!15;UBERON:0002308!4.07e-07!9;UBERON:0000125!4.07e-07!9;UBERON:0000025!5.58e-07!194 | |||
|ontology_enrichment_uberon_v019=UBERON:0002298;4.41e-10;6!UBERON:0000125;2.07e-09;9!UBERON:0002308;2.07e-09;9!UBERON:0004732;1.50e-08;13!UBERON:0000988;1.09e-07;3!UBERON:0000073;4.24e-07;53!UBERON:0002616;4.24e-07;53!UBERON:0004733;8.27e-07;12!UBERON:0002028;8.27e-07;12 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001049,5.94e-15,56;UBERON:0005068,5.94e-15,56;UBERON:0006241,5.94e-15,56;UBERON:0007135,5.94e-15,56;UBERON:0000073,7.91e-13,53;UBERON:0002616,7.91e-13,53;UBERON:0001017,1.14e-11,81;UBERON:0001016,4.90e-11,89;UBERON:0003075,1.39e-10,82;UBERON:0007284,1.39e-10,82;UBERON:0002298,6.68e-10,6;UBERON:0002346,8.08e-10,86;UBERON:0000955,8.33e-10,68;UBERON:0006238,8.33e-10,68;UBERON:0000125,1.87e-09,9;UBERON:0002308,1.87e-09,9;UBERON:0007023,2.08e-09,114;UBERON:0003076,3.01e-09,15;UBERON:0003057,3.01e-09,15;UBERON:0010371,7.00e-09,104;UBERON:0004732,2.02e-08,13;UBERON:0002780,3.75e-08,41;UBERON:0001890,3.75e-08,41;UBERON:0003080,3.75e-08,41;UBERON:0006240,3.75e-08,41;UBERON:0000988,1.57e-07,3;UBERON:0003528,2.43e-07,34;UBERON:0002020,2.43e-07,34 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.6893005858071,0,0,0,0,0,0,0.286235987131057,0.821246550437305,0.251085279189606,0,0,0,0,0,0,0,0,0,0.0774672005803016,0,0,0,0,0,0,0.971680998056939,0,0,0.377875943688809,0,0.232429036905685,0.822335776043652,3.09706370895104,0.28769239232215,0,0.709446689665756,1.03423704220986,1.93645405075148,1.35426486594342,0.941211697713023,0,1.34834090667051,0.306083892370903,0.641858054152187,0.639337125799041,0,0,0,0,0,0,0.251248665256743,0,1.95469960234605,0,0,0.316462387440884,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.130059347559878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795285947051099,0,0.378139268656271,0.221729397462564,0.614843499851882,1.63723844372141,0,0,3.24547393654683,3.65672448328461,6.64789802594326,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.286836620748814,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.365921118388786,0.132529768321485,0.232387885739037,0.932949495138334,0.504641701751257,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.514703430895577,0,0,0,0,0,0,0,1.27523445472584,0.234817388471643,0,0,0,0,0,10.0948972495833,29.484537407544,17.9843706369361,0.93733833986777,0,0,0,0,0,0.492663237895943,0,0,0,0,0.126995788584338,0,7.03304683260282,0,0.102827492703324,0,0,0,0,0,0.258543431515556,0,0,0.26593811658487,0,0,0,0,0,0,0,0,0,0,0,0,0.099972991182057,6.08118903205952,20.5925407487172,59.0335030552489,0,0,0,0,0,0,0,0,0,0,2.03275699377971,3.90419561572865,0,0.837581326671744,0,0.749007023947182,0,0,0,0,0,0,0,0,0,0,2.27407504055985,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.200506470303285,0,0,0,0,0,0.924184045252977,0,0,2.21658420675039,0,0,0,0,0,0,0,0.831076008928724,0.447749509444357,0,0,0,0,0,0.824328093181778,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.15623506123262,0,0,0,0.143124886741991,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.30982349809975,0,0,0,0,0.354761064070598,0,0,0,0,0,0,0,1.50630081242847,0,0,0,0,0,0,0,0,0,0,0,0,1.06824071127473,0,0.245040215981032,0,0,0,0,0,0.5745161103971,0,0,0,0,0,0,0,0,0,0,1.37402137902306,0,0,0,0,0,0,0,0,0,0,2.63714722689409,0.242721043499027,0,0,0.47748896947538,0,0,1.9882952955326,0.422008249231538,0,0,0,0.19924798825107,0,0,0,0,0,0,1.9692329214317,0,0.789147245095469,0,0,0,1.76259386507517,0,0,0,0.724999575434793,1.0241410345695,0.762760950878299,0,0,0,0,1.77148277162768,0.361789315876224,3.05163472634166,0,0.295547618953547,0.658156191461918,0,0,0.0769502585037971,0,0,0,0,2.87101043758728,0.549585560411174,7.99552164027952,0,0,0,0,0,0,0,0,16.2468509686581,13.8747886935276,0,0,0,0.265372693510018,0,0,0,0,0.606610196826093,1.60515529459758,3.27970224015475,0,0,0,0,0,0.61214552326098,0.252746318513952,0,0,0,0,0,0,10.2459436570725,9.70722711091971,0,0,0,0,0,0,0,0,0.0969890164884194,0,1.35588444468319,0,0,0.189932387867636,0,0.961905843018405,4.0556069000477,0,0,0,0,0,0.124252535565433,0,0,0,0,0,4.80336230967832,3.01191833562385,0,0,0,0,0,0,0.199679000498991,0.429226048136571,0,0.0671834724867263,0,0,0.709048640765013,0.412079291905832,1.01105315781277,0.196854963029498,0,2.38568906942791,0.681017030557878,0.321506296930038,0.137539436597234,0.415440338029185,0,0,0.0607495566580247,0,55.7944407678323,0.472091293214983,0,18.1080212726173,0,0,0,0,0.542999601753713,0,0.326587360109409,0,0,0,0,0.293104467356165,0,2.06852730178481,2.77688463659649,0.855434189421647,0,0.106787412567695,0.157204305099666,0.414239055347196,0,0,0,0,0,0,0,0,0,0,2.68457782784319,0.625954653532499,8.027728739661,2.10765197920019,0.683060432355218,0,0,3.1846314683746,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.34940933649081,0.155262956876259,0.414706207840855,1.32920857278997,0.521745061811734,0.150257608997218,0,0.813741466409323,0.181848659202559,0.107410557042488,0.464033759878494,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.40603796469867,0,0.303859956177382,0.553033744606923,0,0,0,0,16.2210119777455,0,0,0,1.54993481694734,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.40171224485641,0,0,0,1.41696576325585,0.957803154342908,10.050701847797,1.26035848110859,0.0691572524642179,0.807378228159255,17.1323304310985,0,0,0,0,0.762764190934334,0,0,0.601682626794058,0,0.781514011233092,0,0,0,0.135075169236789,0.781078098613847,0.826747186004736,0.317079050969534,0,0,0,0,0,2.14280734351315,0,0,0,1.50794029276486,0,0.171488009437418,1.01954599465248,0.131545547125698,0,0,0.156986185701028,0.157115589916002,0,0,3.45484145949794,1.43325506366115,0.142953088353313,0,0.116241425368125,0,0,0,0,0,0,0.591660003652827,0.511280428554946,0,0,1.24082554265728,1.91107787795487,0.559277158988962,0,0,0,0.410651227424988,1.1598144313382,4.85710993059139,0.467878926924211,0,0,0,0,0,0,0.218559560503957,0,0,0,6.87079634902308,2.97046400327086,0.4226557275834,0,0.0939839179798536,0,0,0,0,0,0,0.458729283404541,5.8769229092095,0,0.203974470572744,1.74540276136151,0,0,0,0,5.55132269274347,0.327796715891087,0,0.509944148709909,1.60330443159336,0,0,1.13668047327359,0,14.09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| ||
|short_description=p2@SPP1 | |short_description=p2@SPP1 | ||
}} | }} |
Latest revision as of 06:34, 19 September 2015
Short description: | p2@SPP1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_SPP1_5end |
Coexpression cluster: | C455_kidney_Macrophage_clear_endometrial_Monocytederived_large_spinal |
Association with transcript: | -4bp_to_HQ874461_5end |
EntrezGene: | SPP1 |
HGNC: | 11255 |
UniProt: | F2YBS5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
macrophage | 1.26e-16 | 6 |
epithelial cell of uterus | 8.39e-07 | 6 |
stromal cell of endometrium | 8.39e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
neural tube | 5.94e-15 | 56 |
neural rod | 5.94e-15 | 56 |
future spinal cord | 5.94e-15 | 56 |
neural keel | 5.94e-15 | 56 |
regional part of nervous system | 7.91e-13 | 53 |
regional part of brain | 7.91e-13 | 53 |
central nervous system | 1.14e-11 | 81 |
nervous system | 4.90e-11 | 89 |
neural plate | 1.39e-10 | 82 |
presumptive neural plate | 1.39e-10 | 82 |
brainstem | 6.68e-10 | 6 |
neurectoderm | 8.08e-10 | 86 |
brain | 8.33e-10 | 68 |
future brain | 8.33e-10 | 68 |
neural nucleus | 1.87e-09 | 9 |
nucleus of brain | 1.87e-09 | 9 |
adult organism | 2.08e-09 | 114 |
posterior neural tube | 3.01e-09 | 15 |
chordal neural plate | 3.01e-09 | 15 |
ecto-epithelium | 7.00e-09 | 104 |
segmental subdivision of nervous system | 2.02e-08 | 13 |
regional part of forebrain | 3.75e-08 | 41 |
forebrain | 3.75e-08 | 41 |
anterior neural tube | 3.75e-08 | 41 |
future forebrain | 3.75e-08 | 41 |
pons | 1.57e-07 | 3 |
brain grey matter | 2.43e-07 | 34 |
gray matter | 2.43e-07 | 34 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 8.39e-07 | 6 |