FFCP PHASE1:Hg19::chr12:6346930..6346972,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:6346930..6346972,+
|short_description=p@chr12:6346930..6346972,+
|description=CAGE_peak_at_chr12:6346930..6346972,+
|association_with_transcript=NA
|Entr...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:6346930..6346972,+ | |||
|coexpression_cluster_id=C2228 | |||
|description=CAGE_peak_at_chr12:6346930..6346972,+ | |||
|id=chr12:6346930..6346972,+ | |||
|ontology_enrichment_celltype=CL:0000066!3.86e-15!254;CL:0002078!2.82e-10!44;CL:0000115!3.12e-08!35;CL:0002139!4.35e-08!24;CL:0002321!4.29e-07!248;CL:0000220!4.58e-07!246;CL:0000071!5.88e-07!18;CL:0002546!5.88e-07!18 | |||
|ontology_enrichment_celltype_v019=CL:0000115;3.12e-12;36!CL:0002139;8.99e-12;24!CL:0002078;3.35e-11;45!CL:0000071;4.78e-10;18!CL:1000413;1.65e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002078,5.15e-17,45;CL:0000066,5.03e-16,253;CL:0000115,1.67e-14,36;CL:0002139,2.04e-12,24;CL:0000071,2.36e-10,18;CL:0002546,2.36e-10,18;CL:0000213,7.13e-10,58;CL:0000215,7.13e-10,58;CL:1000413,5.63e-08,9;CL:0000076,1.86e-07,63 | |||
|ontology_enrichment_development_v019=CL:0002546;4.78e-10;18 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000468!4.59e-15!659;UBERON:0000922!4.30e-13!612;UBERON:0000480!4.41e-13!626;UBERON:0000467!4.49e-13!625;UBERON:0002050!6.71e-12!605;UBERON:0005423!6.71e-12!605;UBERON:0000923!1.52e-11!604;UBERON:0005291!1.52e-11!604;UBERON:0006598!1.52e-11!604;UBERON:0002532!1.52e-11!604;UBERON:0000464!8.92e-10!104;UBERON:0000062!2.67e-09!511;UBERON:0000926!4.37e-09!448;UBERON:0004120!4.37e-09!448;UBERON:0006603!4.37e-09!448;UBERON:0004119!1.64e-08!169;UBERON:0000925!1.64e-08!169;UBERON:0006595!1.64e-08!169;UBERON:0004111!2.77e-08!241;UBERON:0001004!6.68e-08!72;UBERON:0001007!1.08e-07!155;UBERON:0001555!1.08e-07!155;UBERON:0007026!1.08e-07!155;UBERON:0000477!1.10e-07!286;UBERON:0001986!5.88e-07!18;UBERON:0004638!5.88e-07!18;UBERON:0004852!5.88e-07!18;UBERON:0000915!6.13e-07!52;UBERON:0000487!7.23e-07!22;UBERON:0000466!7.95e-07!126 | |||
|ontology_enrichment_uberon_v019=UBERON:0004638;4.78e-10;18!UBERON:0001986;4.78e-10;18!UBERON:0004852;4.78e-10;18!UBERON:0000487;1.53e-09;22!UBERON:0006914;1.45e-08;25!UBERON:0003915;1.65e-07;9!UBERON:0004700;1.65e-07;9!UBERON:0001917;1.65e-07;9 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004638,2.36e-10,18;UBERON:0001986,2.36e-10,18;UBERON:0004852,2.36e-10,18;UBERON:0000487,8.10e-10,22;UBERON:0006914,5.85e-09,25;UBERON:0003915,5.63e-08,9;UBERON:0004700,5.63e-08,9;UBERON:0001917,5.63e-08,9 | |||
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| ||
|short_description=p@chr12:6346930..6346972,+ | |||
}} | }} |
Latest revision as of 11:11, 24 July 2015
Short description: | p@chr12:6346930..6346972, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:6346930..6346972, + |
Coexpression cluster: | C2228_Monocytederived_seminal_leiomyoma_Renal_Wilms_Endothelial_amniotic |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
meso-epithelial cell | 5.15e-17 | 45 |
epithelial cell | 5.03e-16 | 253 |
endothelial cell | 1.67e-14 | 36 |
endothelial cell of vascular tree | 2.04e-12 | 24 |
blood vessel endothelial cell | 2.36e-10 | 18 |
embryonic blood vessel endothelial progenitor cell | 2.36e-10 | 18 |
lining cell | 7.13e-10 | 58 |
barrier cell | 7.13e-10 | 58 |
endothelial cell of artery | 5.63e-08 | 9 |
squamous epithelial cell | 1.86e-07 | 63 |
Ontology term | p-value | n |
---|---|---|
blood vessel endothelium | 2.36e-10 | 18 |
endothelium | 2.36e-10 | 18 |
cardiovascular system endothelium | 2.36e-10 | 18 |
simple squamous epithelium | 8.10e-10 | 22 |
squamous epithelium | 5.85e-09 | 25 |
endothelial tube | 5.63e-08 | 9 |
arterial system endothelium | 5.63e-08 | 9 |
endothelium of artery | 5.63e-08 | 9 |