FFCP PHASE1:Hg19::chr12:62996812..62996834,+: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:62996812..62996834,+
|short_description=p@chr12:62996812..62996834,+
|description=CAGE_peak_at_chr12:62996812..62996834,+
|association_with_transcript=NA
...") |
No edit summary |
||
(10 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:62996812..62996834,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_at_chr12:62996812..62996834,+ | |||
|id=chr12:62996812..62996834,+ | |||
|ontology_enrichment_celltype=CL:0000738!8.48e-67!140;CL:0002087!9.05e-56!119;CL:0002031!2.72e-55!124;CL:0000037!1.76e-48!172;CL:0000566!1.76e-48!172;CL:0000988!9.05e-48!182;CL:0002032!1.27e-44!165;CL:0000837!1.27e-44!165;CL:0000766!3.75e-40!76;CL:0000557!1.88e-35!71;CL:0002057!1.96e-35!42;CL:0002009!2.18e-34!65;CL:0000860!4.83e-33!45;CL:0000839!5.31e-33!70;CL:0002194!9.35e-33!63;CL:0000576!9.35e-33!63;CL:0000040!9.35e-33!63;CL:0000559!9.35e-33!63;CL:0000763!1.34e-23!112;CL:0000049!1.34e-23!112;CL:0000542!1.18e-19!53;CL:0000051!1.18e-19!53;CL:0000134!2.81e-19!358;CL:0000838!4.58e-19!52;CL:0002320!1.79e-18!365;CL:0000048!1.84e-15!430;CL:0000219!3.60e-15!390;CL:0000723!6.21e-15!436;CL:0000034!8.48e-15!444;CL:0000945!7.01e-13!24;CL:0000826!7.01e-13!24;CL:0000236!2.57e-10!14;CL:0002393!4.11e-09!9;CL:0002397!4.11e-09!9 | |||
|ontology_enrichment_celltype_v019=CL:0000860;2.96e-43;33!CL:0002057;2.96e-43;33!CL:0000576;9.78e-32;48!CL:0000473;2.88e-31;39!CL:0000234;2.88e-31;39!CL:0000766;2.95e-30;69!CL:0000236;1.54e-19;13!CL:0002087;1.49e-18;104!CL:0000738;2.54e-16;136!CL:0002393;1.16e-14;6!CL:0002397;1.16e-14;6!CL:0000094;4.25e-14;8!CL:0000763;2.77e-12;100!CL:0000945;3.65e-11;24!CL:0000988;2.15e-10;177!CL:0000542;2.31e-10;53!CL:0000081;6.39e-10;11!CL:0000219;4.20e-09;193!CL:0000767;1.20e-07;3!CL:0000623;1.36e-07;3!CL:0000784;1.44e-07;3 | |||
|ontology_enrichment_celltype_v019_2=CL:0000738,6.87e-79,136;CL:0002031,3.37e-65,120;CL:0000037,2.15e-64,168;CL:0000988,4.76e-62,177;CL:0000860,8.19e-62,42;CL:0002057,8.19e-62,42;CL:0000766,2.21e-61,72;CL:0002032,7.98e-60,161;CL:0000837,7.98e-60,161;CL:0002087,5.30e-59,115;CL:0000473,4.37e-56,48;CL:0000234,4.37e-56,48;CL:0000557,1.82e-51,67;CL:0002009,7.65e-49,61;CL:0000839,3.83e-47,66;CL:0002194,2.08e-45,59;CL:0000576,2.08e-45,59;CL:0000040,2.08e-45,59;CL:0000559,2.08e-45,59;CL:0000763,3.58e-42,108;CL:0000049,3.58e-42,108;CL:0000134,2.72e-25,354;CL:0002320,1.98e-24,361;CL:0000219,2.18e-21,386;CL:0000236,3.68e-18,14;CL:0000048,1.13e-17,427;CL:0000034,2.42e-17,441;CL:0000723,3.66e-17,433;CL:0002393,1.01e-15,9;CL:0002397,1.01e-15,9;CL:0000838,1.87e-15,52;CL:0000542,4.73e-15,53;CL:0000051,4.73e-15,53;CL:0000094,2.77e-14,8;CL:0000945,2.84e-11,24;CL:0000826,2.84e-11,24;CL:0000081,4.73e-10,11;CL:0000767,7.20e-08,3;CL:0000623,1.35e-07,3;CL:0000825,1.35e-07,3;CL:0000784,1.38e-07,3 | |||
|ontology_enrichment_development_v019=CL:0002057;1.78e-43;42!CL:0000049;8.34e-11;108!CL:0000051;2.31e-10;53 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002390!3.44e-33!102;UBERON:0003061!3.44e-33!102;UBERON:0002193!7.04e-33!112;UBERON:0002371!3.40e-31!80;UBERON:0001474!3.96e-28!86;UBERON:0002405!2.65e-26!115;UBERON:0004765!3.69e-21!101;UBERON:0001434!3.69e-21!101;UBERON:0002384!1.08e-17!375;UBERON:0003081!8.18e-13!216;UBERON:0002204!1.72e-10!167 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,2.59e-46,76;UBERON:0001474,4.86e-42,82;UBERON:0002390,1.28e-38,98;UBERON:0003061,1.28e-38,98;UBERON:0002405,1.69e-37,93;UBERON:0004765,3.16e-37,90;UBERON:0002193,7.46e-34,108;UBERON:0001434,2.71e-32,100;UBERON:0002384,2.99e-23,371;UBERON:0002204,1.26e-14,167;UBERON:0003081,5.44e-13,203 | |||
|phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.738905305049512,0.314843125254717,3.93364276848904,1.91914699048606,6.81190942590734,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,2.34880351467878,11.6339035791694,6.61796676651468,11.2845652772243,0,0.647787332037959,0.515151135268373,0,1.13362783106643,0.485168122375632,6.74044207026485,4.52284676824008,4.33588919253145,7.19230980805376,3.84241059793651,5.91205574721463,8.96338769915208,3.22742341791913,4.06279459783025,3.20011977222428,2.45615535052061,5.61808711112712,14.0798590490615,5.77672248736969,12.1474053901818,0.989553900560148,0.797854630486527,1.70489900213078,15.0908804086864,11.9150897185139,12.4564449799115,1.00499466102697,3.12889751052121,2.6062661364614,5.44859552370032,10.6800514436394,18.3548184715713,1.26753171787165,6.59073329891635,3.35453832813401,0.898629049171961,1.05123824989054,0.64290234678832,1.42506371870624,1.19350006319454,0.91332076882317,1.75996244461323,3.82297027883492,1.77901850772711,5.9742231159311,2.00197993518006,4.59801951963587,3.30522436392431,4.77026877267682,2.84606484554724,5.28513470433845,3.44045905312706,0,4.48406850385229,0,2.9506465517075,2.75107533924415,1.43921049299656,0,0,0.473447805734733,0,0.445641827540694,0.294605907474837,0.443067789167242,0,0.640456598628376,1.43065282315866,0.328875809207352,0.276350017785848,0.579606171470105,0.14828656316206,0,1.04535523804977,0,1.53288197440768,1.03088233644789,0.759059076058509,0.318565414324097,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0,0,4.23374160771938,4.01160293675261,3.18613688542158,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.26591592103773,4.05434061319081,2.85997455390064,2.60020250930695,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,19.7670626154095,7.75560528296651,0,0,0,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.721832238805369,0.925971025153221,0,1.58040879591855,0,0.246217006087397,0.936017060556951,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,2.48793738648926,5.33243827642757,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,3.64871341923571,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,3.45004119775228,3.08023287071396,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,1.72571360654893,0.960548020230999,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.333926115068718,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0.889563386041866,1.48276726735803,0.522109747527277,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.751617097072463,0,0,0.661983911750998,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.992332043623902,0,1.21792598380896,0,1.08803560673895,2.2562090462043,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0.358177682162975,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0,0.491545817507439,0,0.999936979274649,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,1.9110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0,0,0,0.805095174364105,0 | |phase1_expression=0,0,0.140954404095971,0,0,0,0,0,0.261185628199839,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.125542639594803,0.305653622991805,0.738905305049512,0.314843125254717,3.93364276848904,1.91914699048606,6.81190942590734,0,0.30120591877825,0,0.0774672005803016,0.568676929949686,2.34880351467878,11.6339035791694,6.61796676651468,11.2845652772243,0,0.647787332037959,0.515151135268373,0,1.13362783106643,0.485168122375632,6.74044207026485,4.52284676824008,4.33588919253145,7.19230980805376,3.84241059793651,5.91205574721463,8.96338769915208,3.22742341791913,4.06279459783025,3.20011977222428,2.45615535052061,5.61808711112712,14.0798590490615,5.77672248736969,12.1474053901818,0.989553900560148,0.797854630486527,1.70489900213078,15.0908804086864,11.9150897185139,12.4564449799115,1.00499466102697,3.12889751052121,2.6062661364614,5.44859552370032,10.6800514436394,18.3548184715713,1.26753171787165,6.59073329891635,3.35453832813401,0.898629049171961,1.05123824989054,0.64290234678832,1.42506371870624,1.19350006319454,0.91332076882317,1.75996244461323,3.82297027883492,1.77901850772711,5.9742231159311,2.00197993518006,4.59801951963587,3.30522436392431,4.77026877267682,2.84606484554724,5.28513470433845,3.44045905312706,0,4.48406850385229,0,2.9506465517075,2.75107533924415,1.43921049299656,0,0,0.473447805734733,0,0.445641827540694,0.294605907474837,0.443067789167242,0,0.640456598628376,1.43065282315866,0.328875809207352,0.276350017785848,0.579606171470105,0.14828656316206,0,1.04535523804977,0,1.53288197440768,1.03088233644789,0.759059076058509,0.318565414324097,0.651083453856419,0,0.451725357233318,0.511946444617674,0,0,0,4.23374160771938,4.01160293675261,3.18613688542158,0,0,0.12786256184353,0,0.50133791063589,0.144846518960824,0,0.486634870302636,0.0945348171640679,0.221729397462564,0.175669571386252,0.0654895377488563,0,0,0.649094787309367,0.522389211897802,0.26591592103773,4.05434061319081,2.85997455390064,2.60020250930695,0,0,0,0,0,0,0,0,0.35576626268671,0,0,0.760272105718513,0.24406205754817,0,0,0,0,0,0,0,0,19.7670626154095,7.75560528296651,0,0,0,1.05927344650575,0.286836620748814,0.709336764396714,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.140450806702248,0,0,0,0,0.494533858557114,0,0,0,0,0,0,0,0.150238058906597,0,0,0,0.211931901159562,0,0,0.515281080091258,0.18611685633159,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.252320850875628,0,0,0.643240938192885,0,0,0,0,0,0,0.110293972732394,0,0,0,0,0,0,0,0,0,1.26755034821831,0,0,0,0,0,0,0,0.100528972411631,0,0,0,0,0,0,0.721832238805369,0.925971025153221,0,1.58040879591855,0,0.246217006087397,0.936017060556951,0.148631162288728,0,0,0,0,0,0,0,0.088048434013226,2.48793738648926,5.33243827642757,3.66103056936502,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.791951872933429,0.301439377059586,0,0,3.64871341923571,0,0,0,0,0,0,0,0,0.112085143993527,2.95546140302891,3.45004119775228,3.08023287071396,0,0,0,0,0,2.24702107184155,0,3.72973962092432,0,0,0,0,0,0,0,0,0,0,0,0,0,0.195801157462741,0,0.413536052245775,1.72571360654893,0.960548020230999,0,0,0,0.248107807818777,0.306923946576125,0,0.128139149255701,0,0,0,0,0,0,0.519254429183621,0,0,0,0,0.114814448164607,0,0,0.451199612907412,0,0,1.46139224653261,0,0,0,0,0,0,0,0,0.831076008928724,0,0,0,0,0,0,0.412164046590889,0,0.082509499920588,0,0,0,0.096670718292122,0,0.15350367472613,0.137836572484531,0,0.145016693914229,0,0,0,0,0.255225424989168,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.318203247925937,0.78494864019923,0,0,0.117812402345686,0,0,0,0.48763373908959,0.487426979262569,0,0,0,0,0.551365343546124,0,0.438450885253763,0,0,0,0,0.281695602532241,0.143411352204052,0,0,0,0,0,0,0,0.0962221127255121,0,0,0,0,0,0,0,0,0,0,0.238231775457789,0,0,0.540031437238115,0,0,0,0.245040215981032,0.743212700502875,0,0,0,0,0,0,0,0,0,0,2.50634477090067,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.111443384277478,0,0,0.296964680832639,0,0,0,0.333926115068718,0.329607748453519,0.211125408127993,0.19924798825107,0.276283915531148,0,0,0.123084805461069,0,0.0898683511473268,0.179021174675609,0,0.493217028184668,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0.113942055847001,0,0,0,0.31900115973192,0,1.06606955203727,0,0,0,0,0,0,0,0,0,1.14262965711403,0,0,0,0,0,0.889563386041866,1.48276726735803,0.522109747527277,0,0,0,0.364909578431332,0,0,0,0,0,0.063186579628488,0.751617097072463,0,0,0.661983911750998,0,0,0,0,0,0,0.0870592065804026,0,0,0.0967563312890851,0,0,0,0,0,0,0.19871461170299,0,0,0,0,0,0,0,0,0,0,0,0,0.104602846312333,0,0,0,0.136905378891993,0,0,0.525774708558629,0.279282401272254,0,0,0,0,0,0,0.360299883542404,0,0,0,0,0,0.169346664131569,0,0,0,0,0,1.799791132412,3.0952078182318,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.170388021785422,0,0.146552233678082,0,0,0,0,0,0.213574825135389,0.314408610199332,0,0.992332043623902,0,1.21792598380896,0,1.08803560673895,2.2562090462043,0.919036730290385,0.327872630709804,0,0,0,0,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.151230923763239,0.15543720058278,0,0,0.449803112163605,0,0,0,0,0.150257608997218,0.380805212168795,0,0,0.107410557042488,0,0,0,0,0,0,0,0,0,0.680117776536817,0,0,0.358177682162975,0,0,0,0,0,0,0.345430341731199,0.303859956177382,0,0,0.132864840313363,0.163565394255844,0,0.491545817507439,0,0.999936979274649,0.106691729694141,0.172214979660816,0,0,0,0,0,0,0,0.109209638192014,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.11796972334774,0,0,0,0,0,0,0.40341013740704,0,0,0,0,0,0,0,0,0,0,0.496211178389294,0,0,0,0,0,0,0,0.115233987555779,0.171488009437418,0,0,0.118193840883968,0.222462803784138,0.078493092850514,0,0,0,0,1.9110067515482,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150962843566674,0,0,0,0,0,0,0,0,0,0,0.386747327841463,0.199882311849858,0,0,0.0802413666891683,0,0,0,0,0,0,0,0,0,0,0,0,0,0.101988829741982,0,0,0.250707539292375,0,0.267964130156178,0,0,0,0,0.129177819672012,0.0620747142958579,0,0,0.202117188958219,0,0,0.0673520530145875,0,0.665320713092027,0,0.106727345877715,0,0,0,0,0,0,0.805095174364105,0 | ||
|short_description=p@chr12:62996812..62996834,+ | |||
}} | }} |
Latest revision as of 11:09, 24 July 2015
Short description: | p@chr12:62996812..62996834, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:62996812..62996834, + |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
bone marrow | 2.59e-46 | 76 |
bone element | 4.86e-42 | 82 |
hematopoietic system | 1.28e-38 | 98 |
blood island | 1.28e-38 | 98 |
immune system | 1.69e-37 | 93 |
skeletal element | 3.16e-37 | 90 |
hemolymphoid system | 7.46e-34 | 108 |
skeletal system | 2.71e-32 | 100 |
connective tissue | 2.99e-23 | 371 |
musculoskeletal system | 1.26e-14 | 167 |
lateral plate mesoderm | 5.44e-13 | 203 |