FFCP PHASE1:Hg19::chr12:59313958..59314020,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:59313958..59314020,-
|short_description=p2@LRIG3
|description=CAGE_peak_2_at_LRIG3_5end
|association_with_transcript=-21bp_to_ENST00000548968_5end
|Entre...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=121227 | |EntrezGene=121227 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=30991 | |HGNC=30991 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=-21bp_to_ENST00000548968_5end | |||
|cluster_id=chr12:59313958..59314020,- | |||
|coexpression_cluster_id=C181 | |||
|description=CAGE_peak_2_at_LRIG3_5end | |||
|id=chr12:59313958..59314020,- | |||
|ontology_enrichment_celltype=CL:0000055!1.96e-11!180;CL:0000057!5.45e-09!75;CL:0002620!1.96e-07!23;CL:0000220!2.59e-07!246;CL:0002321!4.08e-07!248 | |||
|ontology_enrichment_celltype_v019=CL:0002620;1.71e-07;23 | |||
|ontology_enrichment_celltype_v019_2=CL:0000057,9.11e-09,76;CL:0002620,1.82e-07,23 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0000475!4.54e-18!365;UBERON:0000481!2.28e-14!347;UBERON:0003102!7.47e-14!95;UBERON:0000477!1.19e-12!286;UBERON:0000468!1.93e-12!659;UBERON:0000119!3.91e-11!312;UBERON:0004119!4.99e-11!169;UBERON:0000925!4.99e-11!169;UBERON:0006595!4.99e-11!169;UBERON:0000483!2.04e-10!309;UBERON:0001007!2.57e-10!155;UBERON:0001555!2.57e-10!155;UBERON:0007026!2.57e-10!155;UBERON:0004111!8.97e-10!241;UBERON:0000467!1.05e-09!625;UBERON:0000480!1.84e-09!626;UBERON:0003104!3.16e-09!238;UBERON:0009142!3.16e-09!238;UBERON:0002100!5.22e-09!216;UBERON:0000161!1.81e-08!35;UBERON:0002097!1.97e-07!40;UBERON:0000165!7.29e-07!28;UBERON:0000930!7.29e-07!28 | |||
|ontology_enrichment_uberon_v019=UBERON:0000165;5.69e-07;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0003102,9.06e-15,99;UBERON:0000119,7.57e-09,309;UBERON:0000161,9.01e-09,36;UBERON:0000483,3.34e-08,306;UBERON:0004119,4.70e-08,160;UBERON:0000925,4.70e-08,160;UBERON:0006595,4.70e-08,160;UBERON:0004111,8.83e-08,240;UBERON:0001007,9.00e-08,145;UBERON:0001555,9.00e-08,145;UBERON:0007026,9.00e-08,145;UBERON:0002097,1.53e-07,41;UBERON:0000165,4.20e-07,29;UBERON:0000930,4.20e-07,29 | |||
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| ||
|short_description=p2@LRIG3 | |||
}} | }} |
Latest revision as of 17:14, 19 September 2015
Short description: | p2@LRIG3 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_LRIG3_5end |
Coexpression cluster: | C181_liposarcoma_somatostatinoma_neuroblastoma_mesothelioma_nonsmall_small_Alveolar |
Association with transcript: | -21bp_to_ENST00000548968_5end |
EntrezGene: | LRIG3 |
HGNC: | 30991 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
fibroblast | 9.11e-09 | 76 |
skin fibroblast | 1.82e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
surface structure | 9.06e-15 | 99 |
cell layer | 7.57e-09 | 309 |
orifice | 9.01e-09 | 36 |
epithelium | 3.34e-08 | 306 |
endoderm-derived structure | 4.70e-08 | 160 |
endoderm | 4.70e-08 | 160 |
presumptive endoderm | 4.70e-08 | 160 |
anatomical conduit | 8.83e-08 | 240 |
digestive system | 9.00e-08 | 145 |
digestive tract | 9.00e-08 | 145 |
primitive gut | 9.00e-08 | 145 |
skin of body | 1.53e-07 | 41 |
mouth | 4.20e-07 | 29 |
stomodeum | 4.20e-07 | 29 |