FFCP PHASE1:Hg19::chr12:58329819..58329867,-: Difference between revisions
From FANTOM5_SSTAR
(Created page with "{{FFCP
|id=chr12:58329819..58329867,-
|short_description=p1@ENST00000547492,p1@ENST00000551421,p1@ENST00000553102,p1@uc001sqo.2
|description=CAGE_peak_1_at_ENST00000547492_...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene= | |EntrezGene= | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_ncRNA | |||
|HGNC= | |HGNC= | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000547492,ENST00000551421,ENST00000553102,uc001sqo.2_5end | |||
|cluster_id=chr12:58329819..58329867,- | |||
|coexpression_cluster_id=C565 | |||
|description=CAGE_peak_1_at_ENST00000547492_5end,CAGE_peak_1_at_ENST00000551421_5end,CAGE_peak_1_at_ENST00000553102_5end,CAGE_peak_1_at_uc001sqo.2_5end | |||
|id=chr12:58329819..58329867,- | |||
|ontology_enrichment_celltype=CL:0000988!2.01e-15!182;CL:0000037!3.68e-15!172;CL:0000566!3.68e-15!172;CL:0002032!3.10e-14!165;CL:0000837!3.10e-14!165;CL:0000542!2.45e-13!53;CL:0000051!2.45e-13!53;CL:0000838!7.60e-13!52;CL:0000219!1.53e-09!390;CL:0000084!8.06e-09!25;CL:0000827!8.06e-09!25;CL:0002320!3.19e-08!365;CL:0000134!4.70e-08!358 | |||
|ontology_enrichment_celltype_v019=CL:0000084;4.69e-11;25!CL:0000542;4.90e-10;53 | |||
|ontology_enrichment_celltype_v019_2=CL:0000988,3.72e-20,177;CL:0000037,5.62e-20,168;CL:0002032,2.86e-19,161;CL:0000837,2.86e-19,161;CL:0000542,2.03e-16,53;CL:0000051,2.03e-16,53;CL:0000838,9.36e-16,52;CL:0000084,3.37e-11,25;CL:0000827,3.37e-11,25;CL:0000219,1.29e-08,386;CL:0000134,4.62e-08,354;CL:0002320,1.53e-07,361;CL:0002031,5.69e-07,120 | |||
|ontology_enrichment_development_v019=CL:0000051;4.90e-10;53 | |||
|ontology_enrichment_disease=DOID:2531!2.56e-28!51;DOID:0060083!2.56e-28!51;DOID:1240!2.16e-23!39;DOID:8692!1.66e-18!31;DOID:0050686!4.34e-11!137 | |||
|ontology_enrichment_disease_v019=DOID:1240;2.02e-24;39!DOID:8692;2.24e-23;31!DOID:2531;3.52e-23;51!DOID:0060083;3.52e-23;51!DOID:0060058;5.68e-08;10!DOID:1036;1.42e-07;8 | |||
|ontology_enrichment_disease_v019_2=DOID:2531,6.29e-38,51;DOID:0060083,6.29e-38,51;DOID:1240,4.69e-31,39;DOID:8692,2.82e-24,31;DOID:0050686,1.70e-13,137;DOID:0060058,8.77e-08,10;DOID:1036,1.24e-07,8;DOID:162,1.70e-07,235;DOID:14566,4.25e-07,239 | |||
|ontology_enrichment_uberon=UBERON:0002384!3.67e-09!375 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002384,4.19e-08,371 | |||
|phase1_expression=0,0.214100523890983,0.140954404095971,0,0,0,0,0,0.522371256399677,2.45733936501509,0.697801167972428,0.218441372130172,0.263766978228454,0.990130823680373,0.662794751455832,0,0.602694528023977,0,0,3.20114750999649,0.816002764977012,4.07491137921514,2.86235987131057,2.05311637609326,1.50651167513763,1.75750833220288,1.47781061009902,1.49550484495991,11.8009283054671,3.83829398097213,4.64448369948228,0,0,0,70.4176853274942,21.3253848731132,214.915521593108,0.553995408531877,0.601633342410425,1.08505435357926,0.447830948479849,0,0,0.145398238779565,0,0,0.697287110717054,0,0.619412741790207,0.28769239232215,0.256160706529101,0.709446689665756,1.72372840368309,0.645484683583826,0,0.752969358170419,0,0.224723484445085,0.306083892370903,0,0.639337125799041,0,0.598390972864896,0,0.290209238628584,0,0,0.502497330513487,0.521482918420201,0.65156653411535,1.21079900526674,0.368277635987565,0.632924774881769,0.211255286311942,0,0.628975936525128,0.561643155732475,0.150176892841506,0.803627933485401,1.42506371870624,0.99458338599545,1.27864907635244,0,0.546138611262131,0,1.70692089026603,0.800791974072025,0,0.661044872784862,0.954053754535364,5.69212969109448,5.28513470433845,5.3518251937532,277.559790015954,65.5795018688397,151.445848745669,4.32761494250433,3.14408610199332,8.22405995998037,0.501559486172034,5.86660079940463,6.62826928028627,5.84480185223734,9.02424700769906,7.65975359434577,6.64601683750863,5.1452734115353,3.71464827204458,3.64166173167659,6.74195408875072,5.25065033793112,3.47763702882063,9.63862660553393,10.4340922954988,7.31748666634838,4.64568305060021,7.2811893784365,13.0578429283399,10.8798467568386,0.318565414324097,2.60433381542567,2.85135613334512,1.80690142893327,0.255973222308837,0,0.710331756132051,2.46338399076314,5.84659555351724,3.20928234940209,4.34473211648397,0,2.01210257911091,0.511450247374121,6.86734389530676,0,2.462390822334,0.795285947051099,0.486634870302636,3.49778823507051,2.21729397462564,1.31752178539689,25.2134720333097,0,0,0,0,0,0.476981248610684,0.571994910780128,1.11437250398869,0.198762407366705,0,0,0,0.419499436209906,0.550236083880135,0.626984899610432,0.258416759169329,0,0,0,0.760272105718513,0,0,0,0.446498641420399,0.22452937262617,0,0,0,0,0,0,0,0.993943903390637,0,0.264818361626438,0.860509862246441,1.06400514659507,0,0,0.74000264525148,0.311211035399766,0.808264032418128,0.490385709340376,0,0,1.40592859100278,0,0,0.149448680551801,0.352303495931295,0.971237666208789,1.26405726032024,0.204154171254893,0.982674538494144,0.309977343527296,0,0.247266929278557,0,0.718618141816238,2.18836948140286,0.875829639103749,0.831192346452549,0.438977620880838,0.612975591598039,0.751190294532984,1.13432183160021,1.4351170855109,0.85422955527427,1.05965950579781,3.60109315301283,1.95799805553034,2.31876486041066,0.37223371266318,2.70042131586026,0.779496041289589,3.02920529092937,1.01254888506529,0.80823028409406,3.90510551768276,3.72782763442269,2.37384829234683,0,0,0,0,0,0.116193942869518,0.621966330092223,0,0.36497735907583,0,0,2.76269842704961,1.39310378409594,0,0.354920400119532,0.168584690078102,0,0.220587945464788,0,0,0.134831308160164,0.392442930250692,0.38474715694639,0,0,0.8231480226628,1.47008711385542,0,0,0,81.2292102922957,0,0.857839051492628,0,0,0,0,1.62904152655162,0,1.44331342025273,2.78232971940184,0.939269553886573,0.144366447761074,0,0,0,0,0,0,0.297262324577456,0,0,0,0.626909658919938,0,0,29.5597942737566,42.3512967603617,17.6228898209656,23.6356723603817,12.1192736089325,0.571481048629521,1.14596527667483,0,1.71072446022705,0.616964956219941,0.600686115687835,0.571652865261156,0.560655421726804,0,0.36669142910475,0.387815147273333,3.57656445851882,0.845302752556,0.797814349754612,0,1.80045161983499,0,0.799266537048298,2.7165818795048,3.25572963234866,1.64648067356154,1.95441710576241,1.77695974371273,3.95975936466715,0.904318131178758,0,0.199945982364114,1.2162378064119,0,0,0,0,2.85273810081437,0.579125226670317,0.410952645100767,0.895304816199478,33.4013729100711,6.69904584686553,3.66566877261179,5.39040752374943,0,0,0.773288812777695,0.670065061337395,0.637938751653163,0,0,0.414415513436035,1.59498939234882,0.500170521059677,0,1.45579603071565,2.14114786556594,1.10391690523754,0.468565659970853,0.601892199455438,0,0,0.664225598535437,0.921845842708516,1.99832313276591,0.979005787313703,0.686286847621712,0.206768026122887,1.2942852049117,0.640365346820666,0.303127571446259,0,0,0.496215615637554,0.460385919864187,0,0.768834895534206,0,0.321707842287215,0,0.616838775210622,0.355123450626254,0.574890092096664,0.519254429183621,0.697262270759755,0.120859449591622,0.200506470303285,0,0.68888668898764,1.45672934405374,0.262248829918848,0.451199612907412,0.385076685522074,0.784349769176855,0,0.422206515571503,0,0.170093705276516,0.215915916102139,1.54227252690289,0.541892875087706,1.00337954770971,0.254876273045038,0,1.79099803777743,14.4711518586317,17.5161752186683,0,0.656029291399411,0.976135183992909,0,1.37354197227515,1.15513299888823,0,0,1.6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| ||
|short_description=p1@ENST00000547492,p1@ENST00000551421,p1@ENST00000553102,p1@uc001sqo.2 | |||
}} | }} |
Latest revision as of 11:00, 24 July 2015
Short description: | p1@ENST00000547492, p1@ENST00000551421, p1@ENST00000553102, p1@uc001sqo.2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_ENST00000547492_5end, CAGE_peak_1_at_ENST00000551421_5end, CAGE_peak_1_at_ENST00000553102_5end, CAGE_peak_1_at_uc001sqo.2_5end |
Coexpression cluster: | C565_CD34_CD133_acute_thymus_Hodgkin_Burkitt_testis |
Association with transcript: | 0bp_to_ENST00000547492, ENST00000551421, ENST00000553102, uc001sqo.2_5end |
EntrezGene: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic cell | 3.72e-20 | 177 |
hematopoietic stem cell | 5.62e-20 | 168 |
hematopoietic oligopotent progenitor cell | 2.86e-19 | 161 |
hematopoietic multipotent progenitor cell | 2.86e-19 | 161 |
lymphocyte | 2.03e-16 | 53 |
common lymphoid progenitor | 2.03e-16 | 53 |
lymphoid lineage restricted progenitor cell | 9.36e-16 | 52 |
T cell | 3.37e-11 | 25 |
pro-T cell | 3.37e-11 | 25 |
motile cell | 1.29e-08 | 386 |
mesenchymal cell | 4.62e-08 | 354 |
connective tissue cell | 1.53e-07 | 361 |
hematopoietic lineage restricted progenitor cell | 5.69e-07 | 120 |
Ontology term | p-value | n |
---|---|---|
connective tissue | 4.19e-08 | 371 |
Ontology term | p-value | n |
---|---|---|
hematologic cancer | 6.29e-38 | 51 |
immune system cancer | 6.29e-38 | 51 |
leukemia | 4.69e-31 | 39 |
myeloid leukemia | 2.82e-24 | 31 |
organ system cancer | 1.70e-13 | 137 |
lymphoma | 8.77e-08 | 10 |
chronic leukemia | 1.24e-07 | 8 |
cancer | 1.70e-07 | 235 |
disease of cellular proliferation | 4.25e-07 | 239 |