FFCP PHASE1:Hg19::chr1:203152908..203152924,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr1:203152908..203152924,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_at_chr1:203152908..203152924,- | |description=CAGE_peak_at_chr1:203152908..203152924,- | ||
|id=chr1:203152908..203152924,- | |id=chr1:203152908..203152924,- | ||
|ontology_enrichment_celltype=CL:0000153!1.75e-19!9;CL:0000447!1.75e-19!9;CL:0000667!1.52e-15!6;CL:0000058!1.52e-15!6;CL:0000138!1.52e-15!6;CL:0000327!4.08e-12!14;CL:0000594!2.07e-10!3;CL:0000499!1.63e-09!27;CL:0000188!6.13e-09!9;CL:0000235!7.31e-09!10 | |ontology_enrichment_celltype=CL:0000153!1.75e-19!9;CL:0000447!1.75e-19!9;CL:0000667!1.52e-15!6;CL:0000058!1.52e-15!6;CL:0000138!1.52e-15!6;CL:0000327!4.08e-12!14;CL:0000594!2.07e-10!3;CL:0000499!1.63e-09!27;CL:0000188!6.13e-09!9;CL:0000235!7.31e-09!10 | ||
|ontology_enrichment_celltype_v019=CL:0000153;2.42e-53;9!CL:0000447;2.42e-53;9!CL:0000138;1.07e-41;6!CL:0000327;8.24e-32;15!CL:0000499;1.09e-27;28!CL:0000235;7.31e-27;6!CL:0000135;1.62e-14;3!CL:0000388;1.62e-14;3!CL:0000214;5.39e-14;3!CL:0000151;1.59e-10;36!CL:0000182;3.81e-08;12!CL:0002540;1.34e-07;6 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.58e-53,9;CL:0000447,1.58e-53,9;CL:0000058,1.03e-41,6;CL:0000138,1.03e-41,6;CL:0000327,6.39e-32,15;CL:0000499,8.58e-28,28;CL:0000235,1.09e-26,6;CL:0000135,1.41e-14,3;CL:0000388,1.41e-14,3;CL:0000214,3.87e-14,3;CL:0000151,6.11e-13,36;CL:0000182,3.95e-08,12;CL:0002540,1.34e-07,6 | |||
|ontology_enrichment_development_v019=UBERON:0004161;1.06e-08;11!UBERON:0009497;1.94e-07;13 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:5662;1.24e-11;1 | |||
|ontology_enrichment_disease_v019_2=DOID:5662,1.31e-11,1 | |||
|ontology_enrichment_uberon=UBERON:0002298!4.77e-14!8;UBERON:0006331!1.21e-10!3;UBERON:0000988!1.48e-10!3;UBERON:0002148!7.78e-08!2;UBERON:0009662!7.78e-08!2;UBERON:0002405!3.99e-07!115 | |ontology_enrichment_uberon=UBERON:0002298!4.77e-14!8;UBERON:0006331!1.21e-10!3;UBERON:0000988!1.48e-10!3;UBERON:0002148!7.78e-08!2;UBERON:0009662!7.78e-08!2;UBERON:0002405!3.99e-07!115 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;1.62e-14;3!UBERON:0000043;1.62e-14;3!UBERON:0007845;1.62e-14;3!UBERON:0006915;5.39e-14;3!UBERON:0007616;5.39e-14;3!UBERON:0002217;5.39e-14;3!UBERON:0002018;5.39e-14;3!UBERON:0001282;2.96e-11;1!UBERON:0009842;2.96e-11;1!UBERON:0003704;2.96e-11;1!UBERON:0001171;2.96e-11;1!UBERON:0001172;2.96e-11;1!UBERON:0002107;1.23e-08;19!UBERON:0006925;1.23e-08;19 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,1.41e-14,3;UBERON:0000043,1.41e-14,3;UBERON:0007845,1.41e-14,3;UBERON:0006915,3.87e-14,3;UBERON:0007616,3.87e-14,3;UBERON:0002217,3.87e-14,3;UBERON:0002018,3.87e-14,3;UBERON:0001282,3.28e-11,1;UBERON:0009842,3.28e-11,1;UBERON:0003704,3.28e-11,1;UBERON:0001171,3.28e-11,1;UBERON:0001172,3.28e-11,1;UBERON:0002107,1.29e-08,19;UBERON:0006925,1.29e-08,19;UBERON:0008836,1.29e-08,19;UBERON:0008835,1.84e-07,22;UBERON:0003894,1.84e-07,22;UBERON:0009854,3.83e-07,23 | |||
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| ||
|short_description=p@chr1:203152908..203152924,- | |short_description=p@chr1:203152908..203152924,- | ||
}} | }} |
Latest revision as of 02:25, 28 July 2015
Short description: | p@chr1:203152908..203152924, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr1:203152908..203152924, - |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.58e-53 | 9 |
carbohydrate secreting cell | 1.58e-53 | 9 |
chondroblast | 1.03e-41 | 6 |
chondrocyte | 1.03e-41 | 6 |
extracellular matrix secreting cell | 6.39e-32 | 15 |
stromal cell | 8.58e-28 | 28 |
macrophage | 1.09e-26 | 6 |
fibrocyte | 1.41e-14 | 3 |
tendon cell | 1.41e-14 | 3 |
synovial cell | 3.87e-14 | 3 |
secretory cell | 6.11e-13 | 36 |
hepatocyte | 3.95e-08 | 12 |
mesenchymal stem cell of the bone marrow | 1.34e-07 | 6 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 1.41e-14 | 3 |
tendon | 1.41e-14 | 3 |
regular connective tissue | 1.41e-14 | 3 |
stratified squamous epithelium | 3.87e-14 | 3 |
layer of synovial tissue | 3.87e-14 | 3 |
synovial joint | 3.87e-14 | 3 |
synovial membrane of synovial joint | 3.87e-14 | 3 |
intralobular bile duct | 3.28e-11 | 1 |
acinus | 3.28e-11 | 1 |
intrahepatic bile duct | 3.28e-11 | 1 |
portal lobule | 3.28e-11 | 1 |
hepatic acinus | 3.28e-11 | 1 |
liver | 1.29e-08 | 19 |
digestive gland | 1.29e-08 | 19 |
liver bud | 1.29e-08 | 19 |
hepatic diverticulum | 1.84e-07 | 22 |
liver primordium | 1.84e-07 | 22 |
digestive tract diverticulum | 3.83e-07 | 23 |
Ontology term | p-value | n |
---|---|---|
pleomorphic carcinoma | 1.31e-11 | 1 |