FFCP PHASE1:Hg19::chr1:203148522..203148550,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=1116 | |EntrezGene=1116 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=1932 | |HGNC=1932 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=60bp_to_uc001gzl.3_5end | |association_with_transcript=60bp_to_uc001gzl.3_5end | ||
|cluster_id=chr1:203148522..203148550,- | |||
|coexpression_cluster_id=C283 | |||
|description=CAGE_peak_4_at_CHI3L1_5end | |description=CAGE_peak_4_at_CHI3L1_5end | ||
|id=chr1:203148522..203148550,- | |id=chr1:203148522..203148550,- | ||
|ontology_enrichment_celltype=CL:0000153!3.43e-10!9;CL:0000447!3.43e-10!9;CL:0000667!2.61e-08!6;CL:0000058!2.61e-08!6;CL:0000138!2.61e-08!6;CL:0000499!3.25e-07!27 | |ontology_enrichment_celltype=CL:0000153!3.43e-10!9;CL:0000447!3.43e-10!9;CL:0000667!2.61e-08!6;CL:0000058!2.61e-08!6;CL:0000138!2.61e-08!6;CL:0000499!3.25e-07!27 | ||
|ontology_enrichment_celltype_v019=CL:0000153;1.80e-26;9!CL:0000447;1.80e-26;9!CL:0000138;1.08e-20;6!CL:0000235;6.08e-20;6!CL:0000499;7.97e-16;28!CL:0000327;1.73e-15;15!CL:0000135;2.74e-15;3!CL:0000388;2.74e-15;3!CL:0000775;9.44e-15;3!CL:0000094;1.75e-09;8!CL:0002540;6.29e-08;6!CL:0000214;1.01e-07;3!CL:0000081;6.47e-07;11 | |||
|ontology_enrichment_celltype_v019_2=CL:0000153,1.91e-26,9;CL:0000447,1.91e-26,9;CL:0000058,1.15e-20,6;CL:0000138,1.15e-20,6;CL:0000235,8.02e-20,6;CL:0000499,8.52e-16,28;CL:0000327,1.79e-15,15;CL:0000135,3.09e-15,3;CL:0000388,3.09e-15,3;CL:0000775,1.01e-14,3;CL:0000094,1.83e-09,8;CL:0002540,6.37e-08,6;CL:0000214,1.01e-07,3;CL:0000151,1.59e-07,36;CL:0000081,6.68e-07,11;CL:0000048,8.21e-07,427;CL:0000134,8.80e-07,354 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0007023!4.04e-12!115;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0003080!1.04e-09!42;UBERON:0002791!1.44e-09!33;UBERON:0002020!2.14e-09!34;UBERON:0003528!2.14e-09!34;UBERON:0001049!2.54e-09!57;UBERON:0005068!2.54e-09!57;UBERON:0006241!2.54e-09!57;UBERON:0007135!2.54e-09!57;UBERON:0001893!3.63e-09!34;UBERON:0001017!5.86e-09!82;UBERON:0005743!6.29e-09!86;UBERON:0000073!8.90e-09!94;UBERON:0001016!8.90e-09!94;UBERON:0002619!4.10e-08!22;UBERON:0002616!6.32e-08!59;UBERON:0001869!1.01e-07!32;UBERON:0001950!1.34e-07!20;UBERON:0000955!2.57e-07!69;UBERON:0006238!2.57e-07!69;UBERON:0000956!7.76e-07!25;UBERON:0000203!7.76e-07!25 | |ontology_enrichment_uberon=UBERON:0007023!4.04e-12!115;UBERON:0002780!4.54e-10!41;UBERON:0001890!4.54e-10!41;UBERON:0006240!4.54e-10!41;UBERON:0003080!1.04e-09!42;UBERON:0002791!1.44e-09!33;UBERON:0002020!2.14e-09!34;UBERON:0003528!2.14e-09!34;UBERON:0001049!2.54e-09!57;UBERON:0005068!2.54e-09!57;UBERON:0006241!2.54e-09!57;UBERON:0007135!2.54e-09!57;UBERON:0001893!3.63e-09!34;UBERON:0001017!5.86e-09!82;UBERON:0005743!6.29e-09!86;UBERON:0000073!8.90e-09!94;UBERON:0001016!8.90e-09!94;UBERON:0002619!4.10e-08!22;UBERON:0002616!6.32e-08!59;UBERON:0001869!1.01e-07!32;UBERON:0001950!1.34e-07!20;UBERON:0000955!2.57e-07!69;UBERON:0006238!2.57e-07!69;UBERON:0000956!7.76e-07!25;UBERON:0000203!7.76e-07!25 | ||
|ontology_enrichment_uberon_v019=UBERON:0007846;2.74e-15;3!UBERON:0000043;2.74e-15;3!UBERON:0007845;2.74e-15;3!UBERON:0006915;1.01e-07;3!UBERON:0007616;1.01e-07;3!UBERON:0002217;1.01e-07;3!UBERON:0002018;1.01e-07;3 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007846,3.09e-15,3;UBERON:0000043,3.09e-15,3;UBERON:0007845,3.09e-15,3;UBERON:0006915,1.01e-07,3;UBERON:0007616,1.01e-07,3;UBERON:0002217,1.01e-07,3;UBERON:0002018,1.01e-07,3 | |||
|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,7.22878304769133,8.02140657017423,24.7687547423009,56.465302240628,9.24606253575008,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,8.19014927987332,6.09387765383786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,8.51366464488333,1.00451418286425,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,5.24304916763028,5.9832291840805,2.07207756718018,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0,0,0.464841513839837,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,0,0,0,0,35.0438674594122,16.4647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,1.11838053946208,1.33479313369527,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,6.03892895989106,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,7.3296432369046,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,2.88950589901519,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.215566666774,0,0,0.79339561045614,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0.887432412294818,0,0,0,0,0,0,0,0,0,0.467426619694449,2.21922344601045,6.62910518462812,38.2383210663914,7.11848977277229,0,0.756154618816195,0,0,0,0,0,0,0,0,1.50257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97355644620836,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,9.77481653793285,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,1.65772931330429,0,0.691259661814092,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,11.903840581336,116.930434043749,1.29787968637137,0,0,0,0,0,0,0,0.530450887527676,0,0,0.103432995861895,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,1.57788851863888,0,0,0.213454691755431,0,0,0,0,0,0,0,0 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|phase1_expression=0,0,0,0,0,0,0,0.631719873426831,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.32389366601898,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.43806866313962,0,0,7.22878304769133,8.02140657017423,24.7687547423009,56.465302240628,9.24606253575008,0,0,0,0,0,0,0,0,0.26591592103773,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.31780417436063,0,0,0,0,0,0,0,0,0,0,0.622422070799533,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920498986422993,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,6.87979051674338,1.77236972004421,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.190254152234598,0,0,0.492434012174795,8.19014927987332,6.09387765383786,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.387815147273333,0,1.690605505112,0,0,0,0,0,0,0,0,0,0,0,0.301439377059586,0,0,8.51366464488333,1.00451418286425,10.5416969741516,0,0,0,0,0,0,0,0,0,0,0,1.30139853857622,0.773288812777695,0,0.637938751653163,5.24304916763028,5.9832291840805,2.07207756718018,0.12269149171914,0,0,0,0,0,0,0,0,1.03473071292505,0,0.184369168541703,0.173767228936166,0,0,0,0,0,0,0,0,0.248107807818777,0,0,0,0.511707249066704,0.160853921143607,0,0.154209693802656,0.355123450626254,0,0,0.464841513839837,0.120859449591622,0,0,0.229628896329213,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.103041011647722,0,0,0,0,0,0,1.07834031980251,0.307007349452259,0,0.107420244868274,0.145016693914229,0.0852266274161009,0.356128142586949,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141405431953713,0,0,0,0,1.15755106853338,0.655894752046633,0,0.30982349809975,0,0,0,0,0,35.0438674594122,16.4647446479951,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.79312517629427,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.614481528616916,1.11838053946208,1.33479313369527,0.390776190804081,0,0,0,0,0,0,0.439524537815682,0,0,0,0,0,0,0.994147647766298,0.281338832821026,0.222617410045812,0,0,0,0,0,0,0,0.311039587661807,0,0,0,0.197286811273867,0,0,0,0.185536196323703,0,0,0,0,0,0,0,0,0,0,0,0.60298219312704,0,0,0,0,0,0,0,6.03892895989106,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0.141353071433941,0,0,0.176915129006678,0,0,0,0,0.067401132980677,0,0,0,0,0,0,0,0,7.3296432369046,0,0,0,0,0,0,0,0,0,0,0,1.39781334593624,0,0,0,0,0.0969890164884194,0,0,0,0,0.126621591911757,0,0,0,0,0,0,0,0,0,0.471388069233591,0,0,0,2.88950589901519,0,0.547621515567972,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.795229689809303,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,14.215566666774,0,0,0.79339561045614,0,0,0.320362237703084,0,0.414239055347196,0,0,0,0,0,0,0,0,0,0.886068179966986,0.366078794705889,0.250381861413,0,0.887432412294818,0,0,0,0,0,0,0,0,0,0.467426619694449,2.21922344601045,6.62910518462812,38.2383210663914,7.11848977277229,0,0.756154618816195,0,0,0,0,0,0,0,0,1.50257608997218,0.380805212168795,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.97355644620836,0,0,0.168942440653073,0,0,0,0.276516872303462,0,0,0,0,0,0,0,0.320075189082423,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0642292250964595,0,0.319267718114302,0.205116364240755,0,0,0,0,0,0,0,0,0,0,0,0.150420656698515,0,0,0,0,0,0,0,0.413373593002368,0,0,0,0,0,0,0,0,0.606965604236632,0.455324382702595,0.0887023701626388,0,9.77481653793285,0.0679697329768317,0.0657727735628491,0,0,0.078493092850514,0,0,0,0.215927591218621,0,0.214429632529969,0,0,0,0,1.65772931330429,0,0.691259661814092,0,0.236664001461131,0.426067023795788,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.297046400327086,0,0,0,0.0644578879735772,0,0,0,0,0,0,0.286679166302903,0,0.135982980381829,0,0,11.903840581336,116.930434043749,1.29787968637137,0,0,0,0,0,0,0,0.530450887527676,0,0,0.103432995861895,0,0,0,0.186224142887574,0,0,0,0.217716747896961,0,0,1.57788851863888,0,0,0.213454691755431,0,0,0,0,0,0,0,0 | ||
|short_description=p4@CHI3L1 | |short_description=p4@CHI3L1 | ||
}} | }} |
Latest revision as of 22:07, 19 September 2015
Short description: | p4@CHI3L1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_4_at_CHI3L1_5end |
Coexpression cluster: | C283_tenocyte_Chondrocyte_mesenchymal_Macrophage_pleomorphic_Synoviocyte_cholangiocellular |
Association with transcript: | 60bp_to_uc001gzl.3_5end |
EntrezGene: | CHI3L1 |
HGNC: | 1932 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
GAG secreting cell | 1.91e-26 | 9 |
carbohydrate secreting cell | 1.91e-26 | 9 |
chondroblast | 1.15e-20 | 6 |
chondrocyte | 1.15e-20 | 6 |
macrophage | 8.02e-20 | 6 |
stromal cell | 8.52e-16 | 28 |
extracellular matrix secreting cell | 1.79e-15 | 15 |
fibrocyte | 3.09e-15 | 3 |
tendon cell | 3.09e-15 | 3 |
neutrophil | 1.01e-14 | 3 |
granulocyte | 1.83e-09 | 8 |
mesenchymal stem cell of the bone marrow | 6.37e-08 | 6 |
synovial cell | 1.01e-07 | 3 |
secretory cell | 1.59e-07 | 36 |
blood cell | 6.68e-07 | 11 |
multi fate stem cell | 8.21e-07 | 427 |
mesenchymal cell | 8.80e-07 | 354 |
Ontology term | p-value | n |
---|---|---|
dense regular connective tissue | 3.09e-15 | 3 |
tendon | 3.09e-15 | 3 |
regular connective tissue | 3.09e-15 | 3 |
stratified squamous epithelium | 1.01e-07 | 3 |
layer of synovial tissue | 1.01e-07 | 3 |
synovial joint | 1.01e-07 | 3 |
synovial membrane of synovial joint | 1.01e-07 | 3 |