FFCP PHASE1:Hg19::chr4:76823577..76823588,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5470 | |EntrezGene=5470 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9244 | |HGNC=9244 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPQ9 | |UniProt=E7EPQ9 | ||
|association_with_transcript=-1bp_to_ENST00000511880_5end | |association_with_transcript=-1bp_to_ENST00000511880_5end | ||
|cluster_id=chr4:76823577..76823588,- | |||
|coexpression_cluster_id=C41 | |||
|description=CAGE_peak_3_at_PPEF2_5end | |description=CAGE_peak_3_at_PPEF2_5end | ||
|id=chr4:76823577..76823588,- | |id=chr4:76823577..76823588,- | ||
|ontology_enrichment_celltype=CL:0002057!8.93e-08!42;CL:0000860!2.66e-07!45 | |ontology_enrichment_celltype=CL:0002057!8.93e-08!42;CL:0000860!2.66e-07!45 | ||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0003056;4.27e-34;3 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001905!6.48e-18!2;UBERON:0002757!6.48e-18!2;UBERON:0010134!6.48e-18!2;UBERON:0002784!6.48e-18!2;UBERON:0005408!6.48e-18!2;UBERON:0001899!6.48e-18!2;UBERON:0003296!1.22e-09!4;UBERON:0010133!1.22e-09!4;UBERON:0000966!5.35e-08!5;UBERON:0005388!5.35e-08!5;UBERON:0001802!5.35e-08!5;UBERON:0000970!1.21e-07!20;UBERON:0002104!2.52e-07!21;UBERON:0000020!9.13e-07!23 | |||
|ontology_enrichment_uberon_v019=UBERON:0001905;4.52e-50;2!UBERON:0002757;4.52e-50;2!UBERON:0010134;4.52e-50;2!UBERON:0005408;4.52e-50;2!UBERON:0001899;4.52e-50;2!UBERON:0003296;7.14e-26;4!UBERON:0010133;7.14e-26;4!UBERON:0002784;7.14e-26;4!UBERON:0000966;4.21e-21;5!UBERON:0005388;4.21e-21;5!UBERON:0001802;4.21e-21;5!UBERON:0001894;1.91e-15;7 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001905,4.52e-50,2;UBERON:0002757,4.52e-50,2;UBERON:0010134,4.52e-50,2;UBERON:0005408,4.52e-50,2;UBERON:0001899,4.52e-50,2;UBERON:0003296,7.14e-26,4;UBERON:0010133,7.14e-26,4;UBERON:0002784,7.14e-26,4;UBERON:0000966,7.67e-18,6;UBERON:0005388,7.67e-18,6;UBERON:0001802,7.67e-18,6;UBERON:0001894,1.91e-15,7;UBERON:0006222,1.91e-15,7;UBERON:0003056,1.20e-07,61 | |||
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|short_description=p3@PPEF2 | |short_description=p3@PPEF2 | ||
}} | }} |
Latest revision as of 16:51, 18 September 2015
Short description: | p3@PPEF2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PPEF2_5end |
Coexpression cluster: | C41_retina_eye_medulla_Retinal_medulloblastoma_kidney_pineal |
Association with transcript: | -1bp_to_ENST00000511880_5end |
EntrezGene: | PPEF2 |
HGNC: | 9244 |
UniProt: | E7EPQ9 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
pineal body | 4.52e-50 | 2 |
regional part of epithalamus | 4.52e-50 | 2 |
secretory circumventricular organ | 4.52e-50 | 2 |
circumventricular organ | 4.52e-50 | 2 |
epithalamus | 4.52e-50 | 2 |
gland of diencephalon | 7.14e-26 | 4 |
neuroendocrine gland | 7.14e-26 | 4 |
regional part of diencephalon | 7.14e-26 | 4 |
retina | 7.67e-18 | 6 |
photoreceptor array | 7.67e-18 | 6 |
posterior segment of eyeball | 7.67e-18 | 6 |
diencephalon | 1.91e-15 | 7 |
future diencephalon | 1.91e-15 | 7 |
pre-chordal neural plate | 1.20e-07 | 61 |