FFCP PHASE1:Hg19::chr4:69775342..69775385,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:69775342..69775385,+ | |||
|coexpression_cluster_id=C235 | |||
|description=CAGE_peak_at_chr4:69775342..69775385,+ | |description=CAGE_peak_at_chr4:69775342..69775385,+ | ||
|id=chr4:69775342..69775385,+ | |id=chr4:69775342..69775385,+ | ||
|ontology_enrichment_celltype=CL:0002563!2.44e-16!4;CL:0002149!2.49e-11!6;CL:0002255!2.49e-11!6;CL:0000223!3.59e-09!59;CL:0002076!5.15e-09!43;CL:0002253!5.94e-09!2 | |ontology_enrichment_celltype=CL:0002563!2.44e-16!4;CL:0002149!2.49e-11!6;CL:0002255!2.49e-11!6;CL:0000223!3.59e-09!59;CL:0002076!5.15e-09!43;CL:0002253!5.94e-09!2 | ||
|ontology_enrichment_celltype_v019=CL:0002149;6.78e-23;6!CL:0002255;6.78e-23;6!CL:0002231;2.19e-12;3!CL:0002076;1.80e-10;42!CL:0002563;1.44e-09;4 | |||
|ontology_enrichment_celltype_v019_2=CL:0002149,6.07e-23,6;CL:0002255,6.07e-23,6;CL:0002076,3.76e-13,42;CL:0002231,2.31e-12,3;CL:0000223,1.11e-09,58;CL:0002563,1.44e-09,4 | |||
|ontology_enrichment_development_v019=UBERON:0005795;3.47e-14;10!CL:0000223;7.07e-09;58 | |||
|ontology_enrichment_disease=DOID:3001!2.49e-11!6 | |||
|ontology_enrichment_disease_v019=DOID:3001;6.78e-23;6 | |||
|ontology_enrichment_disease_v019_2=DOID:3001,6.07e-23,6 | |||
|ontology_enrichment_uberon=UBERON:0001301!2.25e-16!1;UBERON:0001242!2.44e-16!4;UBERON:0001262!2.44e-16!4;UBERON:0004786!2.44e-16!4;UBERON:0004808!2.44e-16!4;UBERON:0001277!2.44e-16!4;UBERON:0003350!2.85e-13!5;UBERON:0005172!1.18e-09!55;UBERON:0005173!1.18e-09!55;UBERON:0002113!3.07e-09!27;UBERON:0003918!3.07e-09!27;UBERON:0005095!3.07e-09!27;UBERON:0007687!3.07e-09!27;UBERON:0002417!1.11e-08!61;UBERON:0000916!1.11e-08!61;UBERON:0006554!1.21e-08!44;UBERON:0001008!1.89e-08!45;UBERON:0000489!7.79e-08!32;UBERON:0000485!8.90e-08!9;UBERON:0003929!4.25e-07!54 | |||
|ontology_enrichment_uberon_v019=UBERON:0001242;1.44e-09;4!UBERON:0001262;1.44e-09;4!UBERON:0004786;1.44e-09;4!UBERON:0004808;1.44e-09;4!UBERON:0001277;1.44e-09;4!UBERON:0000995;9.25e-09;17!UBERON:0000160;2.25e-08;17!UBERON:0003975;2.51e-08;18!UBERON:0002108;5.35e-08;4!UBERON:0004175;2.86e-07;21!UBERON:0005409;9.39e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001242,1.44e-09,4;UBERON:0001262,1.44e-09,4;UBERON:0004786,1.44e-09,4;UBERON:0004808,1.44e-09,4;UBERON:0001277,1.44e-09,4;UBERON:0000160,2.25e-08,17;UBERON:0002108,5.35e-08,4;UBERON:0000995,2.77e-07,21;UBERON:0005795,5.40e-07,22;UBERON:0003975,5.40e-07,22 | |||
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|short_description=p@chr4:69775342..69775385,+ | |short_description=p@chr4:69775342..69775385,+ | ||
}} | }} |
Latest revision as of 06:12, 30 July 2015
Short description: | p@chr4:69775342..69775385, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:69775342..69775385, + |
Coexpression cluster: | C235_Intestinal_Prostate_liver_colon_small_kidney_pancreas |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
epithelial cell of uterus | 6.07e-23 | 6 |
stromal cell of endometrium | 6.07e-23 | 6 |
endo-epithelial cell | 3.76e-13 | 42 |
epithelial cell of prostate | 2.31e-12 | 3 |
endodermal cell | 1.11e-09 | 58 |
intestinal epithelial cell | 1.44e-09 | 4 |
Ontology term | p-value | n |
---|---|---|
intestinal mucosa | 1.44e-09 | 4 |
wall of intestine | 1.44e-09 | 4 |
gastrointestinal system mucosa | 1.44e-09 | 4 |
gastrointestinal system epithelium | 1.44e-09 | 4 |
intestinal epithelium | 1.44e-09 | 4 |
intestine | 2.25e-08 | 17 |
small intestine | 5.35e-08 | 4 |
uterus | 2.77e-07 | 21 |
embryonic uterus | 5.40e-07 | 22 |
internal female genitalia | 5.40e-07 | 22 |
Ontology term | p-value | n |
---|---|---|
female reproductive endometrioid cancer | 6.07e-23 | 6 |