FFCP PHASE1:Hg19::chr4:56458309..56458322,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=132954 | |EntrezGene=132954 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29524 | |HGNC=29524 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N4E4 | |UniProt=Q8N4E4 | ||
|association_with_transcript=56bp_to_ENST00000295645,NM_152401,uc003hbb.2_5end | |association_with_transcript=56bp_to_ENST00000295645,NM_152401,uc003hbb.2_5end | ||
|cluster_id=chr4:56458309..56458322,- | |||
|coexpression_cluster_id=C601 | |||
|description=CAGE_peak_3_at_PDCL2_5end | |description=CAGE_peak_3_at_PDCL2_5end | ||
|id=chr4:56458309..56458322,- | |id=chr4:56458309..56458322,- | ||
|ontology_enrichment_celltype=CL:0002322!3.00e-76!5;CL:0000039!3.92e-20!7;CL:0000586!3.92e-20!7;CL:0000148!2.23e-14!10;CL:0000541!2.23e-14!10;CL:0000147!1.90e-10!14;CL:0000710!1.77e-07!20 | |ontology_enrichment_celltype=CL:0002322!3.00e-76!5;CL:0000039!3.92e-20!7;CL:0000586!3.92e-20!7;CL:0000148!2.23e-14!10;CL:0000541!2.23e-14!10;CL:0000147!1.90e-10!14;CL:0000710!1.77e-07!20 | ||
|ontology_enrichment_celltype_v019=CL:0002322;1.06e-78;5!CL:0002321;1.01e-26;15!CL:0000039;5.04e-15;7!CL:0000586;5.04e-15;7!CL:0000148;8.06e-11;10!CL:0000147;5.36e-08;14 | |||
|ontology_enrichment_celltype_v019_2=CL:0002322,8.69e-79,5;CL:0000039,5.41e-15,7;CL:0000586,5.41e-15,7;CL:0000148,7.67e-11,10;CL:0000541,7.67e-11,10;CL:0000147,5.18e-08,14 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:3095!8.27e-07!22;DOID:2994!8.27e-07!22 | |||
|ontology_enrichment_disease_v019=DOID:5409;1.40e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:5409,1.40e-07,4 | |||
|ontology_enrichment_uberon=UBERON:0000473!2.13e-30!8;UBERON:0003135!3.09e-22!11;UBERON:0000991!8.01e-12!21;UBERON:0009196!8.01e-12!21;UBERON:0009117!8.01e-12!21;UBERON:0005564!8.01e-12!21;UBERON:0004176!2.67e-11!22;UBERON:0003101!2.67e-11!22;UBERON:0000079!2.67e-11!22;UBERON:0003133!6.04e-08!48 | |||
|ontology_enrichment_uberon_v019=UBERON:0000922;9.91e-09;49 | |||
|ontology_enrichment_uberon_v019_2= | |||
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|short_description=p3@PDCL2 | |short_description=p3@PDCL2 | ||
}} | }} |
Latest revision as of 01:54, 18 September 2015
Short description: | p3@PDCL2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_PDCL2_5end |
Coexpression cluster: | C601_endometrial_clear_thyroid_kidney_Renal_serous_endometrioid |
Association with transcript: | 56bp_to_ENST00000295645, NM_152401, uc003hbb.2_5end |
EntrezGene: | PDCL2 |
HGNC: | 29524 |
UniProt: | Q8N4E4 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
embryonic stem cell | 8.69e-79 | 5 |
germ line cell | 5.41e-15 | 7 |
germ cell | 5.41e-15 | 7 |
melanocyte | 7.67e-11 | 10 |
melanoblast | 7.67e-11 | 10 |
pigment cell | 5.18e-08 | 14 |
Ontology term | p-value | n |
---|---|---|
lung small cell carcinoma | 1.40e-07 | 4 |