FFCP PHASE1:Hg19::chr4:2800803..2800817,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=6452 | |EntrezGene=6452 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=10825 | |HGNC=10825 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=7bp_to_ENST00000513020_5end | |association_with_transcript=7bp_to_ENST00000513020_5end | ||
|cluster_id=chr4:2800803..2800817,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_16_at_SH3BP2_5end | |description=CAGE_peak_16_at_SH3BP2_5end | ||
|id=chr4:2800803..2800817,+ | |id=chr4:2800803..2800817,+ | ||
|ontology_enrichment_celltype=CL:0002057!9.34e-80!42;CL:0000860!1.60e-73!45;CL:0000766!5.31e-61!76;CL:0000557!1.07e-60!71;CL:0002009!3.79e-59!65;CL:0000839!7.50e-59!70;CL:0002194!2.08e-58!63;CL:0000576!2.08e-58!63;CL:0000040!2.08e-58!63;CL:0000559!2.08e-58!63;CL:0000738!1.01e-50!140;CL:0002087!1.25e-44!119;CL:0002031!5.79e-44!124;CL:0000763!5.06e-40!112;CL:0000049!5.06e-40!112;CL:0000037!8.70e-38!172;CL:0000566!8.70e-38!172;CL:0000988!6.05e-36!182;CL:0002032!2.61e-34!165;CL:0000837!2.61e-34!165;CL:0002393!1.52e-14!9;CL:0002397!1.52e-14!9;CL:0000134!1.24e-10!358;CL:0002320!4.22e-10!365;CL:0000063!2.00e-08!578;CL:0000219!2.99e-08!390 | |ontology_enrichment_celltype=CL:0002057!9.34e-80!42;CL:0000860!1.60e-73!45;CL:0000766!5.31e-61!76;CL:0000557!1.07e-60!71;CL:0002009!3.79e-59!65;CL:0000839!7.50e-59!70;CL:0002194!2.08e-58!63;CL:0000576!2.08e-58!63;CL:0000040!2.08e-58!63;CL:0000559!2.08e-58!63;CL:0000738!1.01e-50!140;CL:0002087!1.25e-44!119;CL:0002031!5.79e-44!124;CL:0000763!5.06e-40!112;CL:0000049!5.06e-40!112;CL:0000037!8.70e-38!172;CL:0000566!8.70e-38!172;CL:0000988!6.05e-36!182;CL:0002032!2.61e-34!165;CL:0000837!2.61e-34!165;CL:0002393!1.52e-14!9;CL:0002397!1.52e-14!9;CL:0000134!1.24e-10!358;CL:0002320!4.22e-10!365;CL:0000063!2.00e-08!578;CL:0000219!2.99e-08!390 | ||
|ontology_enrichment_celltype_v019=CL:0000860;5.76e-84;33!CL:0002057;5.76e-84;33!CL:0000473;4.26e-62;39!CL:0000234;4.26e-62;39!CL:0000576;4.26e-54;48!CL:0000766;4.77e-36;69!CL:0002087;7.19e-17;104!CL:0000763;2.01e-16;100!CL:0002393;1.19e-14;6!CL:0002397;1.19e-14;6!CL:0000738;4.99e-12;136 | |||
|ontology_enrichment_celltype_v019_2=CL:0000860,8.67e-105,42;CL:0002057,8.67e-105,42;CL:0000473,1.96e-97,48;CL:0000234,1.96e-97,48;CL:0002009,2.21e-79,61;CL:0002194,8.93e-77,59;CL:0000576,8.93e-77,59;CL:0000040,8.93e-77,59;CL:0000559,8.93e-77,59;CL:0000557,1.19e-76,67;CL:0000766,1.77e-75,72;CL:0000839,7.64e-73,66;CL:0000763,8.32e-52,108;CL:0000049,8.32e-52,108;CL:0002031,2.76e-43,120;CL:0000738,1.16e-42,136;CL:0002087,1.22e-39,115;CL:0002032,4.26e-35,161;CL:0000837,4.26e-35,161;CL:0000037,2.23e-33,168;CL:0000988,2.29e-31,177;CL:0002393,5.97e-15,9;CL:0002397,5.97e-15,9;CL:0000134,1.87e-12,354;CL:0002320,4.38e-12,361;CL:0000219,8.87e-11,386;CL:0000048,3.54e-09,427;CL:0000723,5.89e-09,433;CL:0000034,1.14e-08,441 | |||
|ontology_enrichment_development_v019=CL:0002057;2.14e-75;42!CL:0000049;1.85e-13;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!3.21e-52!80;UBERON:0002390!4.87e-51!102;UBERON:0003061!4.87e-51!102;UBERON:0001474!1.50e-47!86;UBERON:0002193!5.15e-45!112;UBERON:0004765!2.65e-38!101;UBERON:0001434!2.65e-38!101;UBERON:0002405!3.92e-38!115;UBERON:0002204!1.59e-17!167;UBERON:0003081!1.77e-16!216;UBERON:0002384!2.22e-09!375;UBERON:0000926!1.79e-08!448;UBERON:0004120!1.79e-08!448;UBERON:0006603!1.79e-08!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,5.55e-67,76;UBERON:0001474,1.06e-61,82;UBERON:0004765,9.71e-56,90;UBERON:0002405,9.15e-54,93;UBERON:0002390,9.69e-51,98;UBERON:0003061,9.69e-51,98;UBERON:0001434,1.30e-49,100;UBERON:0002193,1.60e-45,108;UBERON:0002204,2.37e-27,167;UBERON:0003081,2.06e-21,203;UBERON:0002384,1.40e-11,371;UBERON:0000926,1.47e-11,315;UBERON:0004120,1.47e-11,315;UBERON:0006603,1.47e-11,315 | |||
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| ||
|short_description=p16@SH3BP2 | |short_description=p16@SH3BP2 | ||
}} | }} |
Latest revision as of 12:21, 17 September 2015
Short description: | p16@SH3BP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_16_at_SH3BP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | 7bp_to_ENST00000513020_5end |
EntrezGene: | SH3BP2 |
HGNC: | 10825 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
classical monocyte | 8.67e-105 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.67e-105 | 42 |
defensive cell | 1.96e-97 | 48 |
phagocyte | 1.96e-97 | 48 |
macrophage dendritic cell progenitor | 2.21e-79 | 61 |
monopoietic cell | 8.93e-77 | 59 |
monocyte | 8.93e-77 | 59 |
monoblast | 8.93e-77 | 59 |
promonocyte | 8.93e-77 | 59 |
granulocyte monocyte progenitor cell | 1.19e-76 | 67 |
myeloid leukocyte | 1.77e-75 | 72 |
myeloid lineage restricted progenitor cell | 7.64e-73 | 66 |
myeloid cell | 8.32e-52 | 108 |
common myeloid progenitor | 8.32e-52 | 108 |
hematopoietic lineage restricted progenitor cell | 2.76e-43 | 120 |
leukocyte | 1.16e-42 | 136 |
nongranular leukocyte | 1.22e-39 | 115 |
hematopoietic oligopotent progenitor cell | 4.26e-35 | 161 |
hematopoietic multipotent progenitor cell | 4.26e-35 | 161 |
hematopoietic stem cell | 2.23e-33 | 168 |
hematopoietic cell | 2.29e-31 | 177 |
intermediate monocyte | 5.97e-15 | 9 |
CD14-positive, CD16-positive monocyte | 5.97e-15 | 9 |
mesenchymal cell | 1.87e-12 | 354 |
connective tissue cell | 4.38e-12 | 361 |
motile cell | 8.87e-11 | 386 |
multi fate stem cell | 3.54e-09 | 427 |
somatic stem cell | 5.89e-09 | 433 |
stem cell | 1.14e-08 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 5.55e-67 | 76 |
bone element | 1.06e-61 | 82 |
skeletal element | 9.71e-56 | 90 |
immune system | 9.15e-54 | 93 |
hematopoietic system | 9.69e-51 | 98 |
blood island | 9.69e-51 | 98 |
skeletal system | 1.30e-49 | 100 |
hemolymphoid system | 1.60e-45 | 108 |
musculoskeletal system | 2.37e-27 | 167 |
lateral plate mesoderm | 2.06e-21 | 203 |
connective tissue | 1.40e-11 | 371 |
mesoderm | 1.47e-11 | 315 |
mesoderm-derived structure | 1.47e-11 | 315 |
presumptive mesoderm | 1.47e-11 | 315 |