FFCP PHASE1:Hg19::chr4:23905703..23905719,-: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=10891 | |EntrezGene=10891 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=9237 | |HGNC=9237 | ||
|TSSclassifier=strong | |||
|UniProt= | |UniProt= | ||
|association_with_transcript=0bp_to_ENST00000514494_5end | |association_with_transcript=0bp_to_ENST00000514494_5end | ||
|cluster_id=chr4:23905703..23905719,- | |||
|description=CAGE_peak_2_at_PPARGC1A_5end | |description=CAGE_peak_2_at_PPARGC1A_5end | ||
|id=chr4:23905703..23905719,- | |id=chr4:23905703..23905719,- | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0000097;2.16e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0000097,2.33e-07,5;CL:0002028,2.33e-07,5 | |||
|ontology_enrichment_development_v019=UBERON:0005062;2.82e-09;4!UBERON:0007284;2.82e-09;4 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019=DOID:114;1.69e-08;2 | |||
|ontology_enrichment_disease_v019_2=DOID:114,1.32e-08,2 | |||
|ontology_enrichment_uberon=UBERON:0007023!1.51e-60!115;UBERON:0001049!3.46e-18!57;UBERON:0005068!3.46e-18!57;UBERON:0006241!3.46e-18!57;UBERON:0007135!3.46e-18!57;UBERON:0002616!5.14e-16!59;UBERON:0003075!1.20e-14!86;UBERON:0007284!1.20e-14!86;UBERON:0005743!5.41e-14!86;UBERON:0001017!6.53e-14!82;UBERON:0002346!1.42e-13!90;UBERON:0000955!2.29e-13!69;UBERON:0006238!2.29e-13!69;UBERON:0000073!8.21e-12!94;UBERON:0001016!8.21e-12!94;UBERON:0002780!1.79e-11!41;UBERON:0001890!1.79e-11!41;UBERON:0006240!1.79e-11!41;UBERON:0000062!2.21e-11!511;UBERON:0000153!2.84e-11!129;UBERON:0007811!2.84e-11!129;UBERON:0003080!4.42e-11!42;UBERON:0000477!1.97e-10!286;UBERON:0002308!2.09e-10!9;UBERON:0000125!2.09e-10!9;UBERON:0004111!2.85e-10!241;UBERON:0004121!1.04e-09!169;UBERON:0002298!1.94e-09!8;UBERON:0000481!2.41e-09!347;UBERON:0000924!3.19e-09!173;UBERON:0006601!3.19e-09!173;UBERON:0000033!4.65e-09!123;UBERON:0003076!5.43e-09!15;UBERON:0003057!5.43e-09!15;UBERON:0000025!6.24e-09!194;UBERON:0001894!4.10e-08!7;UBERON:0006222!4.10e-08!7;UBERON:0009663!5.24e-08!7;UBERON:0003103!6.21e-08!69;UBERON:0000475!9.23e-08!365;UBERON:0000483!1.45e-07!309;UBERON:0000119!2.38e-07!312;UBERON:0000467!4.58e-07!625;UBERON:0003056!5.05e-07!61;UBERON:0000480!5.16e-07!626;UBERON:0000369!5.30e-07!4;UBERON:0002435!5.30e-07!4;UBERON:0000204!5.30e-07!4;UBERON:0010082!5.30e-07!4;UBERON:0000468!7.16e-07!659;UBERON:0001893!8.55e-07!34;UBERON:0003978!8.68e-07!3;UBERON:0009751!8.68e-07!3;UBERON:0004151!8.68e-07!3;UBERON:0000946!8.68e-07!3;UBERON:0002523!8.68e-07!3;UBERON:0005983!8.68e-07!3;UBERON:0002165!8.68e-07!3;UBERON:0002062!8.68e-07!3;UBERON:0007280!8.68e-07!3;UBERON:0000922!9.79e-07!612 | |||
|ontology_enrichment_uberon_v019=UBERON:0004151;3.06e-12;3!UBERON:0003978;3.18e-12;3!UBERON:0000946;3.18e-12;3!UBERON:0007100;8.21e-11;25!UBERON:0005090;2.71e-09;2!UBERON:0001630;2.71e-09;2!UBERON:0001829;4.11e-09;2!UBERON:0002133;4.28e-09;2!UBERON:0002081;7.99e-09;2!UBERON:0007023;8.91e-09;114!UBERON:0003127;9.33e-09;2!UBERON:0000341;9.33e-09;2 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0007023,3.93e-26,114;UBERON:0003978,2.89e-12,3;UBERON:0009751,2.89e-12,3;UBERON:0004151,2.89e-12,3;UBERON:0000946,2.89e-12,3;UBERON:0002523,2.89e-12,3;UBERON:0005983,2.89e-12,3;UBERON:0002165,2.89e-12,3;UBERON:0002062,2.89e-12,3;UBERON:0007280,2.89e-12,3;UBERON:0001041,4.10e-11,87;UBERON:0007100,6.04e-10,27;UBERON:0005090,2.77e-09,2;UBERON:0001630,2.77e-09,2;UBERON:0003103,3.52e-09,68;UBERON:0001829,4.11e-09,2;UBERON:0002133,4.45e-09,2;UBERON:0002081,8.00e-09,2;UBERON:0010227,8.00e-09,2;UBERON:0003127,9.34e-09,2;UBERON:0000341,1.01e-08,2;UBERON:0001048,7.60e-08,160;UBERON:0001004,5.13e-07,74;UBERON:0004921,5.61e-07,118 | |||
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| ||
|short_description=p2@PPARGC1A | |short_description=p2@PPARGC1A | ||
}} | }} |
Latest revision as of 09:25, 17 September 2015
Short description: | p2@PPARGC1A |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_2_at_PPARGC1A_5end |
Coexpression cluster: | NA |
Association with transcript: | 0bp_to_ENST00000514494_5end |
EntrezGene: | PPARGC1A |
HGNC: | 9237 |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
mast cell | 2.33e-07 | 5 |
basophil mast progenitor cell | 2.33e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
adult organism | 3.93e-26 | 114 |
valve | 2.89e-12 | 3 |
cardiac mesenchyme | 2.89e-12 | 3 |
cardiac chamber | 2.89e-12 | 3 |
cardial valve | 2.89e-12 | 3 |
tunica intima | 2.89e-12 | 3 |
heart layer | 2.89e-12 | 3 |
endocardium | 2.89e-12 | 3 |
endocardial cushion | 2.89e-12 | 3 |
presumptive endocardium | 2.89e-12 | 3 |
foregut | 4.10e-11 | 87 |
primary circulatory organ | 6.04e-10 | 27 |
muscle structure | 2.77e-09 | 2 |
muscle organ | 2.77e-09 | 2 |
compound organ | 3.52e-09 | 68 |
major salivary gland | 4.11e-09 | 2 |
atrioventricular valve | 4.45e-09 | 2 |
cardiac atrium | 8.00e-09 | 2 |
future cardiac atrium | 8.00e-09 | 2 |
open tracheal system trachea | 9.34e-09 | 2 |
throat | 1.01e-08 | 2 |
primordium | 7.60e-08 | 160 |
respiratory system | 5.13e-07 | 74 |
subdivision of digestive tract | 5.61e-07 | 118 |
Ontology term | p-value | n |
---|---|---|
heart disease | 1.32e-08 | 2 |