FFCP PHASE1:Hg19::chr4:189415102..189415107,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |association_with_transcript=NA | ||
|cluster_id=chr4:189415102..189415107,+ | |||
|description=CAGE_peak_at_chr4:189415102..189415107,+ | |description=CAGE_peak_at_chr4:189415102..189415107,+ | ||
|id=chr4:189415102..189415107,+ | |id=chr4:189415102..189415107,+ | ||
|ontology_enrichment_celltype= | |ontology_enrichment_celltype= | ||
|ontology_enrichment_celltype_v019=CL:0002591;4.06e-26;1!CL:0000054;1.29e-13;2!CL:0000137;1.29e-13;2!CL:0000092;1.29e-13;2!CL:0000062;4.18e-12;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002591,4.61e-26,1;CL:0000062,5.70e-21,11;CL:0000375,5.70e-21,11;CL:0000335,5.70e-21,11;CL:0000054,1.37e-13,2;CL:0000137,1.37e-13,2;CL:0000092,1.37e-13,2 | |||
|ontology_enrichment_development_v019=CL:0000335;5.51e-21;11!UBERON:0005062;1.86e-07;4!UBERON:0007284;1.86e-07;4 | |||
|ontology_enrichment_disease=DOID:3093!2.28e-07!11;DOID:1192!2.50e-07!3 | |||
|ontology_enrichment_disease_v019=DOID:0060085;8.64e-26;1!DOID:3165;8.64e-26;1!DOID:0060121;8.64e-26;1!DOID:2438;8.64e-26;1!DOID:4418;8.64e-26;1!DOID:200;1.29e-13;2!DOID:4305;1.29e-13;2!DOID:0060072;1.86e-07;4 | |||
|ontology_enrichment_disease_v019_2=DOID:0060085,9.79e-26,1;DOID:3165,9.79e-26,1;DOID:0060121,9.79e-26,1;DOID:2438,9.79e-26,1;DOID:4418,9.79e-26,1;DOID:200,1.37e-13,2;DOID:4305,1.37e-13,2;DOID:0060072,1.92e-07,4 | |||
|ontology_enrichment_uberon= | |||
|ontology_enrichment_uberon_v019=UBERON:0002134;8.64e-26;1!UBERON:0005208;8.64e-26;1!UBERON:0004145;8.64e-26;1!UBERON:0005946;8.64e-26;1!UBERON:0005965;8.64e-26;1!UBERON:0002078;8.64e-26;1!UBERON:0000078;8.82e-14;2!UBERON:0002012;8.82e-14;2!UBERON:0008886;8.82e-14;2!UBERON:0002081;1.29e-13;2!UBERON:0002133;1.29e-13;2!UBERON:0001474;4.01e-13;18!UBERON:0010313;6.94e-11;10!UBERON:0003978;1.60e-09;3!UBERON:0004151;1.60e-09;3!UBERON:0000946;1.60e-09;3!UBERON:0004765;2.71e-09;26!UBERON:0000014;1.86e-07;4!UBERON:0001434;5.88e-07;36 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0004145,7.70e-34,3;UBERON:0002134,5.93e-26,1;UBERON:0005208,5.93e-26,1;UBERON:0005946,5.93e-26,1;UBERON:0005965,5.93e-26,1;UBERON:0002078,5.93e-26,1;UBERON:0000078,9.40e-14,2;UBERON:0007497,9.40e-14,2;UBERON:0003643,9.40e-14,2;UBERON:0003504,9.40e-14,2;UBERON:0003469,9.40e-14,2;UBERON:0003496,9.40e-14,2;UBERON:0002012,9.40e-14,2;UBERON:0008886,9.40e-14,2;UBERON:0007303,9.40e-14,2;UBERON:0002061,9.40e-14,2;UBERON:0005432,9.40e-14,2;UBERON:0004363,9.40e-14,2;UBERON:0002081,1.07e-13,2;UBERON:0002133,1.07e-13,2;UBERON:0010227,1.07e-13,2;UBERON:0010313,6.61e-11,10;UBERON:0002342,6.61e-11,10;UBERON:0005062,6.61e-11,10;UBERON:0003978,1.41e-09,3;UBERON:0009751,1.41e-09,3;UBERON:0004151,1.41e-09,3;UBERON:0000946,1.41e-09,3;UBERON:0002523,1.41e-09,3;UBERON:0005983,1.41e-09,3;UBERON:0002165,1.41e-09,3;UBERON:0002062,1.41e-09,3;UBERON:0007280,1.41e-09,3;UBERON:0000014,1.92e-07,4 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0.89694817844431,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28923662045859,3.30037999682352,0,0,0,0.193341436584244,1.23238893691716,0.767518373630648,0,0,0.290033387828457,0.511359764496605,0,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,2.26016233240486,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.687944129886466,0.483781656445426,0.146178634172371,0.164230914106418,0,0,0,0,1.19228767021794,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.273810757783986,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0.550157746388935,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.470531639396343,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0,0.151230923763239,0.621748802331122,0.295710299979268,0,0,0,0,0,0.521745061811734,0,0,0,0.545545977607678,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.495743057036009,0.558644917973244,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239630536688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0.150962843566674,0,0,0.470317296361523,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0.0918948995348449,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.150176892841506,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.14828656316206,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.361439152384566,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.208994966536811,0,0.71153252537342,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.993943903390637,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.161872944368132,0.280901613404497,0,0,0,0,0,0,0,0.168336113954066,0.375355559615893,0,0,0,0,0,0.89694817844431,0.213557388818567,0.211931901159562,0,0,0,0,0.168776332241266,0,0.252433774244115,0,0.161646056818812,0.710019185033229,0,0,0,0.272746120590835,0,0,0,0,0,0,0.36497735907583,0,0,0,0,0,0,0,0,0,0,0,0,0.196221465125346,0,0,0,0,0,0,0,0,0,0,0,0.109750285408626,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.141775097242386,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.977208552881205,0,0,0,0,0,0,0,0,0,1.14861935834114,0,0.434343920002738,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.153461973288062,0,0,0,0.160853921143607,0,0.154209693802656,0.177561725313127,0,0,0.348631135379878,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,2.28923662045859,3.30037999682352,0,0,0,0.193341436584244,1.23238893691716,0.767518373630648,0,0,0.290033387828457,0.511359764496605,0,0,0.192190067365106,0.382838137483752,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.202182481573316,0,0,0,0,0,0,0,2.26016233240486,0,0,0.438450885253763,0,0,0,0.30982349809975,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.307240764308458,0,0.166849141711909,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.306806047506464,0,0.622079175323615,0,0,0,0,0,0,0,0,0,0,0,0,0.1137934482855,0,0,0,0.291604613383254,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0915975934018623,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0979923974143777,0,0,0.687944129886466,0.483781656445426,0.146178634172371,0.164230914106418,0,0,0,0,1.19228767021794,0,0,0.160317640503067,0,0,0,0.114536596165916,0,0,0,0,0.135904206073614,0.313808538937,0,0,0,0.273810757783986,0,0,0,0,0,1.43574604915363,0,0,0,0,0,0,0.0787831823072236,0.164831716762333,0.0674035438541849,0,0,0,0,0,0.550157746388935,0,0,0,0,0,0.315222829196793,0.0524545881349981,0,0,0,0.714695326373367,0,0.25426853765475,0,0,0,0,0,0.340776043570843,0,0,0,0,0,0.171086837884329,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0620964029413835,0,0,0.151649117541648,0,0.470531639396343,0,0,0.447764408660622,0,0,0.189403005275089,0,0,0,0.151230923763239,0.621748802331122,0.295710299979268,0,0,0,0,0,0.521745061811734,0,0,0,0.545545977607678,0,0,0.398095888698616,0,0.343395705182793,0,0,0,0.428883182749851,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.194860308839388,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33946505990805,0,0.495743057036009,0.558644917973244,0.636008701306837,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,3.83239630536688,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.672567444437648,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.691259661814092,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.994753875806841,0,0.11294608203896,0,0.150962843566674,0,0,0.470317296361523,0.245148321753905,0,0,0.297046400327086,0,0.169927114687817,0,0,0.0999411559249289,0.178553938605658,0,0,0,0,0.143339583151451,0,0,0,0,0,0,0,0,0.109265571963696,0.380095503034311,0,0,0.0918948995348449,0,0,0.267964130156178,0,0.103432995861895,0,0,0,0,0.33639558774184,0,0,0,0,0,0,0,0,0,0,0.0898252021065869,0,0,0,0,0,0 | ||
|short_description=p@chr4:189415102..189415107,+ | |short_description=p@chr4:189415102..189415107,+ | ||
}} | }} |
Latest revision as of 04:12, 30 July 2015
Short description: | p@chr4:189415102..189415107, + |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr4:189415102..189415107, + |
Coexpression cluster: | NA |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
smooth muscle cell of the pulmonary artery | 4.61e-26 | 1 |
osteoblast | 5.70e-21 | 11 |
osteoprogenitor cell | 5.70e-21 | 11 |
mesenchyme condensation cell | 5.70e-21 | 11 |
bone matrix secreting cell | 1.37e-13 | 2 |
osteocyte | 1.37e-13 | 2 |
osteoclast | 1.37e-13 | 2 |
Ontology term | p-value | n |
---|---|---|
organ system benign neoplasm | 9.79e-26 | 1 |
skin benign neoplasm | 9.79e-26 | 1 |
integumentary system benign neoplasm | 9.79e-26 | 1 |
dermis tumor | 9.79e-26 | 1 |
cutaneous fibrous histiocytoma | 9.79e-26 | 1 |
giant cell tumor | 1.37e-13 | 2 |
bone giant cell tumor | 1.37e-13 | 2 |
benign neoplasm | 1.92e-07 | 4 |