FFCP PHASE1:Hg19::chr1:171454659..171454723,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=23215 | |EntrezGene=23215 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=24903 | |HGNC=24903 | ||
|TSSclassifier=strong | |||
|UniProt=E7EPN9,Q9Y520 | |UniProt=E7EPN9,Q9Y520 | ||
|association_with_transcript=0bp_to_ENST00000338920,ENST00000367742,ENST00000476522,NM_015172,uc001ghq.1,uc001ghr.1,uc010pmg.1_5end | |association_with_transcript=0bp_to_ENST00000338920,ENST00000367742,ENST00000476522,NM_015172,uc001ghq.1,uc001ghr.1,uc010pmg.1_5end | ||
|cluster_id=chr1:171454659..171454723,+ | |||
|coexpression_cluster_id=C3904 | |||
|description=CAGE_peak_1_at_PRRC2C_5end | |description=CAGE_peak_1_at_PRRC2C_5end | ||
|id=chr1:171454659..171454723,+ | |id=chr1:171454659..171454723,+ | ||
|ontology_enrichment_celltype=CL:0000037!3.84e-30!172;CL:0000566!3.84e-30!172;CL:0000738!3.44e-28!140;CL:0002032!3.51e-28!165;CL:0000837!3.51e-28!165;CL:0000988!6.53e-27!182;CL:0002087!9.86e-21!119;CL:0002031!4.98e-20!124;CL:0000763!6.36e-19!112;CL:0000049!6.36e-19!112;CL:0000766!8.85e-16!76;CL:0002057!5.34e-15!42;CL:0000860!9.03e-15!45;CL:0000557!1.45e-13!71;CL:0002009!7.62e-12!65;CL:0000839!2.11e-11!70;CL:0002194!4.06e-11!63;CL:0000576!4.06e-11!63;CL:0000040!4.06e-11!63;CL:0000559!4.06e-11!63;CL:0000542!9.44e-09!53;CL:0000051!9.44e-09!53;CL:0000838!2.30e-08!52 | |ontology_enrichment_celltype=CL:0000037!3.84e-30!172;CL:0000566!3.84e-30!172;CL:0000738!3.44e-28!140;CL:0002032!3.51e-28!165;CL:0000837!3.51e-28!165;CL:0000988!6.53e-27!182;CL:0002087!9.86e-21!119;CL:0002031!4.98e-20!124;CL:0000763!6.36e-19!112;CL:0000049!6.36e-19!112;CL:0000766!8.85e-16!76;CL:0002057!5.34e-15!42;CL:0000860!9.03e-15!45;CL:0000557!1.45e-13!71;CL:0002009!7.62e-12!65;CL:0000839!2.11e-11!70;CL:0002194!4.06e-11!63;CL:0000576!4.06e-11!63;CL:0000040!4.06e-11!63;CL:0000559!4.06e-11!63;CL:0000542!9.44e-09!53;CL:0000051!9.44e-09!53;CL:0000838!2.30e-08!52 | ||
|ontology_enrichment_celltype_v019=CL:0000860;1.65e-16;33!CL:0002057;1.65e-16;33!CL:0000473;4.44e-11;39!CL:0000234;4.44e-11;39!CL:0000576;5.11e-10;48!CL:0002087;8.13e-09;104!CL:0000766;1.09e-07;69!CL:0000763;6.61e-07;100 | |||
|ontology_enrichment_celltype_v019_2=CL:0000037,2.84e-30,168;CL:0000738,2.04e-28,136;CL:0002032,2.60e-28,161;CL:0000837,2.60e-28,161;CL:0000988,1.61e-27,177;CL:0002087,6.38e-21,115;CL:0002031,3.48e-20,120;CL:0000763,4.17e-19,108;CL:0000049,4.17e-19,108;CL:0000766,4.35e-16,72;CL:0000860,5.34e-15,42;CL:0002057,5.34e-15,42;CL:0000557,7.85e-14,67;CL:0000473,3.50e-12,48;CL:0000234,3.50e-12,48;CL:0002009,4.33e-12,61;CL:0000839,1.35e-11,66;CL:0002194,2.39e-11,59;CL:0000576,2.39e-11,59;CL:0000040,2.39e-11,59;CL:0000559,2.39e-11,59;CL:0000542,9.44e-09,53;CL:0000051,9.44e-09,53;CL:0000838,2.30e-08,52 | |||
|ontology_enrichment_development_v019=CL:0002057;1.79e-11;42 | |||
|ontology_enrichment_disease=DOID:162!4.15e-10!235;DOID:14566!2.31e-09!239;DOID:0050687!2.61e-07!143 | |ontology_enrichment_disease=DOID:162!4.15e-10!235;DOID:14566!2.31e-09!239;DOID:0050687!2.61e-07!143 | ||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2=DOID:162,4.15e-10,235;DOID:14566,2.31e-09,239;DOID:0050687,2.61e-07,143 | |||
|ontology_enrichment_uberon=UBERON:0002390!4.17e-14!102;UBERON:0003061!4.17e-14!102;UBERON:0002193!7.32e-12!112;UBERON:0001474!1.81e-10!86;UBERON:0002371!3.23e-10!80;UBERON:0004765!9.98e-08!101;UBERON:0001434!9.98e-08!101 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002390,3.17e-14,98;UBERON:0003061,3.17e-14,98;UBERON:0002193,6.59e-12,108;UBERON:0001474,1.48e-10,82;UBERON:0002371,2.54e-10,76;UBERON:0002405,3.10e-09,93;UBERON:0004765,4.80e-08,90;UBERON:0001434,7.50e-07,100 | |||
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| ||
|short_description=p1@PRRC2C | |short_description=p1@PRRC2C | ||
}} | }} |
Latest revision as of 15:05, 18 September 2015
Short description: | p1@PRRC2C |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_1_at_PRRC2C_5end |
Coexpression cluster: | C3904_CD14_Mast_CD19_Neutrophils_CD4_Eosinophils_CD8 |
Association with transcript: | 0bp_to_ENST00000338920, ENST00000367742, ENST00000476522, NM_015172, uc001ghq.1, uc001ghr.1, uc010pmg.1_5end |
EntrezGene: | PRRC2C |
HGNC: | 24903 |
UniProt: | E7EPN9Q9Y520 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
hematopoietic stem cell | 2.84e-30 | 168 |
leukocyte | 2.04e-28 | 136 |
hematopoietic oligopotent progenitor cell | 2.60e-28 | 161 |
hematopoietic multipotent progenitor cell | 2.60e-28 | 161 |
hematopoietic cell | 1.61e-27 | 177 |
nongranular leukocyte | 6.38e-21 | 115 |
hematopoietic lineage restricted progenitor cell | 3.48e-20 | 120 |
myeloid cell | 4.17e-19 | 108 |
common myeloid progenitor | 4.17e-19 | 108 |
myeloid leukocyte | 4.35e-16 | 72 |
classical monocyte | 5.34e-15 | 42 |
CD14-positive, CD16-negative classical monocyte | 5.34e-15 | 42 |
granulocyte monocyte progenitor cell | 7.85e-14 | 67 |
defensive cell | 3.50e-12 | 48 |
phagocyte | 3.50e-12 | 48 |
macrophage dendritic cell progenitor | 4.33e-12 | 61 |
myeloid lineage restricted progenitor cell | 1.35e-11 | 66 |
monopoietic cell | 2.39e-11 | 59 |
monocyte | 2.39e-11 | 59 |
monoblast | 2.39e-11 | 59 |
promonocyte | 2.39e-11 | 59 |
lymphocyte | 9.44e-09 | 53 |
common lymphoid progenitor | 9.44e-09 | 53 |
lymphoid lineage restricted progenitor cell | 2.30e-08 | 52 |
Ontology term | p-value | n |
---|---|---|
hematopoietic system | 3.17e-14 | 98 |
blood island | 3.17e-14 | 98 |
hemolymphoid system | 6.59e-12 | 108 |
bone element | 1.48e-10 | 82 |
bone marrow | 2.54e-10 | 76 |
immune system | 3.10e-09 | 93 |
skeletal element | 4.80e-08 | 90 |
skeletal system | 7.50e-07 | 100 |
Ontology term | p-value | n |
---|---|---|
cancer | 4.15e-10 | 235 |
disease of cellular proliferation | 2.31e-09 | 239 |
cell type cancer | 2.61e-07 | 143 |