FFCP PHASE1:Hg19::chr12:54394059..54394088,+: Difference between revisions
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(Created page with "{{FFCP
|id=chr12:54394059..54394088,+
|short_description=p3@HOXC9
|description=CAGE_peak_3_at_HOXC9_5end
|association_with_transcript=84bp_to_BC032769_5end
|EntrezGene=32...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=3225 | |EntrezGene=3225 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=5130 | |HGNC=5130 | ||
|TSSclassifier=strong | |||
|UniProt=Q8N561 | |UniProt=Q8N561 | ||
|association_with_transcript=84bp_to_BC032769_5end | |||
|cluster_id=chr12:54394059..54394088,+ | |||
|description=CAGE_peak_3_at_HOXC9_5end | |||
|id=chr12:54394059..54394088,+ | |||
|ontology_enrichment_celltype=CL:0002334!1.59e-09!12;CL:0000055!1.92e-08!180;CL:0002570!2.56e-07!8 | |||
|ontology_enrichment_celltype_v019=CL:0002334;4.64e-12;12!CL:0002570;8.73e-12;8!CL:0000188;3.45e-07;9 | |||
|ontology_enrichment_celltype_v019_2=CL:0002334,2.88e-12,12;CL:0002570,5.89e-12,8;CL:0000188,2.79e-07,9 | |||
|ontology_enrichment_development_v019= | |||
|ontology_enrichment_disease=DOID:14566!4.02e-09!239;DOID:162!8.60e-09!235;DOID:0050687!1.47e-07!143 | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0001013!7.78e-09!14;UBERON:0003886!6.52e-08!63;UBERON:0002553!6.00e-07!70;UBERON:0002113!6.71e-07!27;UBERON:0003918!6.71e-07!27;UBERON:0005095!6.71e-07!27;UBERON:0007687!6.71e-07!27 | |||
|ontology_enrichment_uberon_v019=UBERON:0001013;2.70e-11;14!UBERON:0001134;8.74e-09;16!UBERON:0002036;8.74e-09;16!UBERON:0001851;4.41e-07;15!UBERON:0002113;4.79e-07;24!UBERON:0011143;4.79e-07;24!UBERON:0002331;9.19e-07;10 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001013,7.37e-12,14;UBERON:0003104,1.38e-07,160;UBERON:0009142,1.38e-07,160;UBERON:0002100,1.89e-07,199;UBERON:0002331,3.51e-07,10;UBERON:0000358,3.51e-07,10;UBERON:0000307,3.51e-07,10;UBERON:0000091,3.51e-07,10;UBERON:0000087,3.51e-07,10;UBERON:0007010,3.51e-07,10;UBERON:0007806,3.51e-07,10;UBERON:0008780,3.51e-07,10;UBERON:0005728,3.51e-07,10;UBERON:0001851,4.31e-07,15 | |||
|phase1_expression=1.63510541343501,1.2846031433459,1.9733616573436,3.00219895059391,0.893922188854576,1.74467704820074,0,1.89515962028049,0.783556884599516,0,0,0.218441372130172,0,0.990130823680373,0.662794751455832,0,0,0,0.487932798790507,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.722878304769133,1.00267582127178,1.15877215168659,0.795285947051099,0.973269740605272,0,0,0,0.196468613246569,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.33472061276467,1.20848795132744,0,0,0,0,0,0,0,0,0,0.732806975721629,0,0,0,0.496971951695318,0,0.132409180813219,0,0,0,0,0,0,0,0,0,0,0,0,0,0.896692083310806,2.93586246609412,1.61872944368132,1.82586048712923,0,0,0,0,0,5.46096817162816,4.31170885089743,0,0,0,0,0,0,0,1.07633781413317,0,0.847727604638247,0.900273288253207,1.33968288009971,1.03056216018252,0.558350568994769,0.675105328965065,1.46155507741798,0,0.460249493211497,0,0,0.906768884048762,1.01736355386293,0,0,0,0,0,0,0,0,0,0,0,0,1.85747171212792,2.16563844500876,0.828147600278907,1.01150814046861,1.44606617930089,0.882351781859152,1.08939722046203,0.949082476444386,0.269662616320329,0.784885860501384,1.15424147083917,0,0,0,0,0,0,0,0,0,0,0.548751427043128,0,0.603173834469785,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.07470227243418,0.871901815541886,0.766765358330422,0,0,0,0,0,1.65094525159639,4.96584953225761,2.34434894420094,0,0.822619941626588,2.10240140490742,1.42913216315289,0,0,0,2.45616259939778,7.15312891703765,3.381211010224,0.26593811658487,0,3.08648849114571,4.25547396069835,2.1313774321288,0,2.17048642156577,1.64648067356154,2.93162565864362,0,2.37585561880029,0,0,0.99972991182057,0,0,0,0,0,1.42636905040718,2.17171960001369,0.205476322550383,1.25342674267927,0,0,0,0,0,0,0,0,0,0,0,0,0.36807447515742,0.500170521059677,1.35632511849868,0,0,0.315404830067869,0,1.20378439891088,0,0,0.664225598535437,0.553107505625109,0.521301686808497,0,0,0,0,0,0,0,0,1.73675465473144,1.07423381301644,2.24528075546459,0.512556597022804,2.55853624533352,0.804269605718038,2.96836132889982,2.92998418225046,2.84098760501003,2.46381468041427,2.07701771673448,3.02146983995894,0,0.40101294060657,0,0,0,0,0.451199612907412,0.385076685522074,3.92174884588428,1.46139224653261,0.844413031143006,2.27466768141793,0.170093705276516,2.15915916102139,1.54227252690289,2.70946437543853,4.01351819083883,2.80363900349542,0,0.895499018888713,0,0,0,0,0,0.103041011647722,0.640986253728404,0.41254749960294,2.87132768998086,0,1.6068392984416,1.25671933779759,1.84858340537573,1.38153307253517,2.20538515975249,1.18162269355101,0.725083469571143,3.15338521439573,0.712256285173899,0,0,0,0,0,0,0,1.23213432070436,1.06461206063404,0,0,0,0.372158369359667,0,0,0,0,0,0,0,0,0.117812402345686,0.606547444719948,0,0,0,2.43713489631284,6.33900880540533,0,0,0,0,0,0.438450885253763,0,0.655894752046633,1.62328301570163,2.16876448669825,0.281695602532241,1.29070216983646,0.982490410131212,1.78335525740625,0,0.844430541190656,0.329294892959902,0,0,0,0,0,0.0941438007767792,0,0,0,0.229723400206959,0,0,0,0,0,0,0,0,2.24330549367694,0,0.245040215981032,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.586032717087576,2.30584991324076,0,1.42068073403207,0,0,0,0,0,0,0,0.422250816255987,0,0,0,0.409074730008619,0,0,0,0.179021174675609,0,0,0,2.22273980289274,0,0,0,0.260427761085233,0.0874599999961957,1.44999915086959,0.1137934482855,0,0.236387681767936,0,0,1.04174996959975,0,0,0,0,0,0,0.10893846351899,0.139423744278603,0.0769502585037971,0,1.38338342632836,0.359030577639089,1.52106320690811,0.31900115973192,0.549585560411174,0,0,0,0,0.676786981851542,0.980312671588698,1.1747511088309,0.37950746544837,0,0,0,0,1.29833183845255,0,0.0884575645033392,0,1.77912677208373,1.72989514525104,2.50612678813093,0.067401132980677,0,0,0,0.782658475728359,0,0,0,0,0,1.35291077473043,1.34794648816421,0,0.992975867626496,0.627865836814451,1.19472429772959,0,0.554698692052555,0,0,1.30588809870604,0.698906672968121,1.54787429224455,1.64485763191445,1.68105429298227,1.47807822695777,0,0.176512253383001,0,2.05562886970126,1.9871461170299,0,0,0,0,0.19980960958213,0.432271251462318,1.37443915399099,0,0.432164393964449,0,0.235694034616795,0.815425236441684,2.09205692624666,0.305994652908965,0,0,0,0,0.429765441419957,0,0,0,0,0.399358000997982,0,0,0,1.08089965062721,0,0.157566364614447,0.0824158583811665,0,1.08270229666224,0,0,0,0,0,0,0,0,0,0.670869375198532,0.630445658393585,0.629455057619977,0,0.179287339332845,0.575745591958336,0,0,3.051222451857,0,0,0.326587360109409,0,0.164185041498678,1.19271615249795,2.15292973888239,0,0,0,0,2.22412889249628,0,0,0,0,0,0,0,0,0,0.7520696820681,0.919036730290385,0.655745261419609,0.942324577501406,0,0,0,0,0,0,1.24513771442608,0.499921631848426,3.4879297034579,1.42732666772484,0,0,0,1.79105763464249,3.03827302801392,1.10961172300523,0.189403005275089,0.50313580350515,0.889811221596536,0,0.151230923763239,0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| ||
|short_description=p3@HOXC9 | |||
}} | }} |
Latest revision as of 04:47, 19 September 2015
Short description: | p3@HOXC9 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_3_at_HOXC9_5end |
Coexpression cluster: | NA |
Association with transcript: | 84bp_to_BC032769_5end |
EntrezGene: | HOXC9 |
HGNC: | 5130 |
UniProt: | Q8N561 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
preadipocyte | 2.88e-12 | 12 |
mesenchymal stem cell of adipose | 5.89e-12 | 8 |
cell of skeletal muscle | 2.79e-07 | 9 |
Ontology term | p-value | n |
---|---|---|
adipose tissue | 7.37e-12 | 14 |
mesenchyme | 1.38e-07 | 160 |
entire embryonic mesenchyme | 1.38e-07 | 160 |
trunk | 1.89e-07 | 199 |
umbilical cord | 3.51e-07 | 10 |
blastocyst | 3.51e-07 | 10 |
blastula | 3.51e-07 | 10 |
bilaminar disc | 3.51e-07 | 10 |
inner cell mass | 3.51e-07 | 10 |
cleaving embryo | 3.51e-07 | 10 |
connecting stalk | 3.51e-07 | 10 |
inner cell mass derived epiblast | 3.51e-07 | 10 |
extraembryonic mesoderm | 3.51e-07 | 10 |
cortex | 4.31e-07 | 15 |