FFCP PHASE1:Hg19::chr1:164528687..164528711,+: Difference between revisions
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{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=5087 | |EntrezGene=5087 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=8632 | |HGNC=8632 | ||
|TSSclassifier=strong | |||
|UniProt=F8WA05 | |UniProt=F8WA05 | ||
|association_with_transcript=43bp_to_ENST00000340699_5end | |association_with_transcript=43bp_to_ENST00000340699_5end | ||
|cluster_id=chr1:164528687..164528711,+ | |||
|description=CAGE_peak_6_at_PBX1_5end | |description=CAGE_peak_6_at_PBX1_5end | ||
|id=chr1:164528687..164528711,+ | |id=chr1:164528687..164528711,+ | ||
|ontology_enrichment_celltype=CL:0002319!2.76e-09!25;CL:0000133!6.10e-08!59 | |ontology_enrichment_celltype=CL:0002319!2.76e-09!25;CL:0000133!6.10e-08!59 | ||
|ontology_enrichment_celltype_v019=CL:0002319;4.73e-10;25!CL:0000540;2.49e-07;6!CL:0000404;2.49e-07;6!CL:0002322;6.94e-07;5 | |||
|ontology_enrichment_celltype_v019_2=CL:0002319,4.93e-10,25;CL:0000133,3.00e-09,59;CL:0000047,4.64e-09,8;CL:0000540,2.87e-07,6;CL:0000031,2.87e-07,6;CL:0000404,2.87e-07,6;CL:0002322,7.06e-07,5 | |||
|ontology_enrichment_development_v019=CL:0000031;2.49e-07;6 | |||
|ontology_enrichment_disease=DOID:3095!2.80e-07!22;DOID:2994!2.80e-07!22 | |ontology_enrichment_disease=DOID:3095!2.80e-07!22;DOID:2994!2.80e-07!22 | ||
|ontology_enrichment_disease_v019=DOID:3095;2.98e-08;22!DOID:2994;2.98e-08;22 | |||
|ontology_enrichment_disease_v019_2=DOID:3095,3.80e-08,22;DOID:2994,3.80e-08,22 | |||
|ontology_enrichment_uberon=UBERON:0005743!2.06e-26!86;UBERON:0001017!4.88e-26!82;UBERON:0000073!7.20e-26!94;UBERON:0001016!7.20e-26!94;UBERON:0000924!1.23e-21!173;UBERON:0006601!1.23e-21!173;UBERON:0004121!2.52e-20!169;UBERON:0002346!4.43e-20!90;UBERON:0000955!6.72e-20!69;UBERON:0006238!6.72e-20!69;UBERON:0003075!1.06e-18!86;UBERON:0007284!1.06e-18!86;UBERON:0003056!5.55e-17!61;UBERON:0001049!1.01e-16!57;UBERON:0005068!1.01e-16!57;UBERON:0006241!1.01e-16!57;UBERON:0007135!1.01e-16!57;UBERON:0002616!1.43e-16!59;UBERON:0002780!5.77e-16!41;UBERON:0001890!5.77e-16!41;UBERON:0006240!5.77e-16!41;UBERON:0000033!1.91e-15!123;UBERON:0007023!2.34e-15!115;UBERON:0000153!2.82e-15!129;UBERON:0007811!2.82e-15!129;UBERON:0003080!3.96e-15!42;UBERON:0000481!9.98e-15!347;UBERON:0000468!1.04e-14!659;UBERON:0002020!3.03e-14!34;UBERON:0003528!3.03e-14!34;UBERON:0000475!7.06e-14!365;UBERON:0001893!7.60e-14!34;UBERON:0000956!1.29e-13!25;UBERON:0000203!1.29e-13!25;UBERON:0002791!1.37e-13!33;UBERON:0001869!1.71e-13!32;UBERON:0000064!5.17e-12!219;UBERON:0000922!5.74e-12!612;UBERON:0000062!6.14e-12!511;UBERON:0002619!6.58e-12!22;UBERON:0001950!6.48e-11!20;UBERON:0002050!1.87e-09!605;UBERON:0005423!1.87e-09!605;UBERON:0000923!4.03e-09!604;UBERON:0005291!4.03e-09!604;UBERON:0006598!4.03e-09!604;UBERON:0002532!4.03e-09!604;UBERON:0000480!4.16e-09!626;UBERON:0000467!5.45e-09!625;UBERON:0000477!3.32e-08!286;UBERON:0000119!4.50e-08!312;UBERON:0000483!6.88e-08!309;UBERON:0004921!1.41e-07!129;UBERON:0004185!1.41e-07!129;UBERON:0000063!3.70e-07!97 | |||
|ontology_enrichment_uberon_v019=UBERON:0000956;1.02e-18;25!UBERON:0000203;1.02e-18;25!UBERON:0001869;3.39e-16;32!UBERON:0002619;3.55e-16;22!UBERON:0002791;3.72e-16;32!UBERON:0003528;4.50e-16;34!UBERON:0002020;4.50e-16;34!UBERON:0001893;6.44e-15;34!UBERON:0001950;1.02e-14;20!UBERON:0002780;4.52e-13;41!UBERON:0001890;4.52e-13;41!UBERON:0000922;9.99e-13;49!UBERON:0000073;4.77e-10;53!UBERON:0002616;4.77e-10;53!UBERON:0000955;2.21e-09;68!UBERON:0001017;1.74e-08;75!UBERON:0001016;6.45e-08;83!UBERON:0005409;6.43e-07;22 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001017,2.64e-25,81;UBERON:0011216,3.88e-25,223;UBERON:0001016,9.66e-24,89;UBERON:0002346,4.63e-21,86;UBERON:0003056,1.29e-20,61;UBERON:0003075,1.36e-19,82;UBERON:0007284,1.36e-19,82;UBERON:0000956,2.22e-19,25;UBERON:0000203,2.22e-19,25;UBERON:0003528,2.89e-19,34;UBERON:0002020,2.89e-19,34;UBERON:0002780,1.57e-18,41;UBERON:0001890,1.57e-18,41;UBERON:0003080,1.57e-18,41;UBERON:0006240,1.57e-18,41;UBERON:0000955,2.18e-18,68;UBERON:0006238,2.18e-18,68;UBERON:0004121,2.23e-18,171;UBERON:0000924,2.23e-18,171;UBERON:0006601,2.23e-18,171;UBERON:0002791,2.81e-18,32;UBERON:0001869,3.72e-18,32;UBERON:0001049,4.72e-18,56;UBERON:0005068,4.72e-18,56;UBERON:0006241,4.72e-18,56;UBERON:0007135,4.72e-18,56;UBERON:0001893,8.15e-18,34;UBERON:0000073,1.73e-17,53;UBERON:0002616,1.73e-17,53;UBERON:0002619,7.49e-17,22;UBERON:0010371,2.44e-16,104;UBERON:0001950,2.20e-15,20;UBERON:0010314,3.45e-12,132;UBERON:0000922,9.57e-10,592;UBERON:0007023,2.31e-09,114;UBERON:0002050,5.87e-08,564;UBERON:0000923,7.10e-08,560;UBERON:0010316,7.10e-08,560;UBERON:0005291,7.10e-08,560;UBERON:0006598,7.10e-08,560;UBERON:0010317,7.10e-08,560;UBERON:0002532,7.10e-08,560;UBERON:0005423,1.62e-07,581;UBERON:0004921,9.45e-07,118 | |||
|phase1_expression=0.181678379270557,0.214100523890983,0.422863212287913,0,0,0.872338524100369,0,0,0.783556884599516,0.491467873003018,0,0.436882744260345,0.263766978228454,0.495065411840187,0,0,0,0.730310090387373,0,1.10808952269109,0.408001382488506,2.5076377718247,7.72837165253853,4.24310717725941,5.14724822338691,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.605399502633369,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,7.31420598941885,1.34140171940727,0.895037932904712,0,1.00267582127178,0.289693037921647,0,0,5.19941494402373,5.32150553910154,3.68906099911129,1.57174890597255,0,0,0,0,0,0,0,0,0.198762407366705,0,0,0,0,0,0,0,0.35576626268671,0,0,0,0,0,0,0.357198913136319,0.673588117878509,0.112611480483322,0,0,0,0,0,0,0,0.633152558322899,0.397227542439656,0.573673241497627,1.06400514659507,1.68203280042692,0,0.24666754841716,0.622422070799533,0.134710672069688,1.14423332179421,0.756787138224657,2.30470369792,0.937285727335186,0,0,0,0.23486899728753,0.161872944368132,0.140450806702248,0.61246251376468,0,0.723280468230358,1.18800285728205,0.494533858557114,0,0.718618141816238,0,0.375355559615893,0,0,0,0.150238058906597,0,0.179389635688862,0.213557388818567,0.423863802319124,0.300091096084402,0.618315175430633,0.515281080091258,0.18611685633159,0.337552664482532,0.779496041289589,0.252433774244115,0.644349290496095,2.10139873864455,0.355009592516614,1.10827308050404,0.508681776931463,0,0,0,29.1517157649733,47.4456570590917,24.9816977169465,10.366105501537,30.7831438068267,75.185335969621,0,1.28648187638577,1.38134921352481,0.464367928031979,0.721879481669586,2.01121560067735,1.18009283054671,0.723033089650446,1.10293972732394,1.30727666455444,1.18635309555548,0.943819157121151,1.56977172100277,0.769494313892781,0,0,1.2347220339942,0,0,0.982827216677626,0.590789906681404,0,6.14942192715568,1.88724591328378,0.109750285408626,0,0,0.648119116109707,0.651616610620649,0,1.44331342025273,1.73895607462615,1.40890433082986,0.144366447761074,0,0,1.58040879591855,0,0,0,0,0,0,0,0,0,0,1.97065295158377,0.528290604079356,0,0.288239906833923,0.37872730027914,0.126995788584338,0,0,0,0,0,0,0.448524337381443,0.87192013766656,0.22001485746285,0.129271715757778,0,0,1.86156681609409,3.12022310734098,0,0,0,2.7165818795048,1.08524321078289,0.823240336780769,0,1.42156779497018,1.58390374586686,0,0.871533458600294,0.499864955910285,0,0,0,0,1.14861935834114,0,0.144781306667579,0.205476322550383,0.179060963239896,0,0,0,0,8.89331184778622,5.20559415430487,4.63973287666617,3.01529277601828,7.01732626818479,0,0,0,0.24538298343828,0,0,1.24782516918484,1.07057393278297,1.10391690523754,1.17141414992713,0,0,0,0,0,1.56390506042549,0.195801157462741,0,0,0,0,0,0,0.907170879989041,0.248107807818777,1.38115775959256,0.841980283299221,0.256278298511402,1.53512174720011,0.160853921143607,0,0.771048469013278,0,0.0821271560138091,0.519254429183621,0.232420756919918,14.2614150518114,0,0.276242966807689,1.14814448164607,0.182091168006717,0.655622074797121,0.451199612907412,0.0770153371044148,0,0,0.211103257785751,0,0,0,0,0,0.501689773854853,0,0,0,0,0,0.512900250232778,1.64007322849853,0.325378394664303,0.618246069886334,0.54941678891006,0.742585499285292,0.574265537996172,0,0,0.096670718292122,0.154048617114644,0.15350367472613,0.137836572484531,0.751941714077915,0.435050081742686,0.0852266274161009,0,0,0.192190067365106,0.255225424989168,0,0,0,0.6970372701606,0,0,0,0,1.00187420719394,0.372158369359667,0.316379424718726,1.14378116354295,0,2.56763392820352,0.636406495851874,0,4.67668389716618,4.66712950551293,2.23843564456804,0.606547444719948,0,0,0.975267478179181,0.243713489631284,0,0.682499557039929,9.04994764503762,0,1.10273068709225,0,0.438450885253763,0,1.9676842561399,0.405820753925408,0,0,0.573645408816206,0,0,2.12856638442359,0.422215270595328,0,1.89736586882858,10.1481068871045,0.192444225451024,0,0,0.847294206991012,0,0,0.443430153536676,0,0.507447609232169,0,0,0,0,0,0,1.58625035258854,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.540911356951966,0,0,0,0.439524537815682,0,0,0,0,0.593929361665277,0.307160702099232,1.9882952955326,2.95405774462077,0,0,20.2680391802874,1.39473591775749,2.76283915531148,1.0077309914171,0.920418142519393,0.123084805461069,0,0.359473404589307,13.2475669259951,0,2.07151151837561,0,0,0.969332746095218,1.76259386507517,7.98455192004777,8.33368835472746,38.1325599983413,0,0.682760689712998,0.254253650292766,0.709163045303809,0.344743373241465,1.16641845353302,1.21537496453305,0.885741385813839,1.20596438625408,0,0.774054819518572,0.295547618953547,3.29078095730959,0,3.62501735124369,7.07942378234933,9.7990168028421,0,0.179515288819544,0,0,0.366390373607449,0,0,0,0,0,0,0,0,0.158936578980379,0,0,27.4224958581845,0,0.995261931078505,0.796118080530053,6.11030144933625,0,0,0,0.67401132980677,1.60515529459758,0.702793337176017,0,0.586993856796269,0,1.18375320854817,3.62972148145992,5.81538247097931,0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| ||
|short_description=p6@PBX1 | |short_description=p6@PBX1 | ||
}} | }} |
Latest revision as of 09:10, 18 September 2015
Short description: | p6@PBX1 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_6_at_PBX1_5end |
Coexpression cluster: | NA |
Association with transcript: | 43bp_to_ENST00000340699_5end |
EntrezGene: | PBX1 |
HGNC: | 8632 |
UniProt: | F8WA05 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
neural cell | 4.93e-10 | 25 |
neurectodermal cell | 3.00e-09 | 59 |
neuronal stem cell | 4.64e-09 | 8 |
neuron | 2.87e-07 | 6 |
neuroblast | 2.87e-07 | 6 |
electrically signaling cell | 2.87e-07 | 6 |
embryonic stem cell | 7.06e-07 | 5 |
Ontology term | p-value | n |
---|---|---|
germ cell and embryonal cancer | 3.80e-08 | 22 |
germ cell cancer | 3.80e-08 | 22 |