FFCP PHASE1:Hg19::chr4:159726885..159726899,+: Difference between revisions
From FANTOM5_SSTAR
No edit summary |
No edit summary |
||
(9 intermediate revisions by the same user not shown) | |||
Line 1: | Line 1: | ||
{{FFCP | {{FFCP | ||
|DHSsupport=supported | |||
|DPIdataset=robust | |||
|EntrezGene=57600 | |EntrezGene=57600 | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=gencodeV16_protein_coding | |||
|HGNC=29280 | |HGNC=29280 | ||
|TSSclassifier=strong | |||
|UniProt=D6RFH5 | |UniProt=D6RFH5 | ||
|association_with_transcript=-346bp_to_ENST00000512986_5end | |association_with_transcript=-346bp_to_ENST00000512986_5end | ||
|cluster_id=chr4:159726885..159726899,+ | |||
|coexpression_cluster_id=C0 | |||
|description=CAGE_peak_8_at_FNIP2_5end | |description=CAGE_peak_8_at_FNIP2_5end | ||
|id=chr4:159726885..159726899,+ | |id=chr4:159726885..159726899,+ | ||
|ontology_enrichment_celltype=CL:0002194!9.66e-87!63;CL:0000576!9.66e-87!63;CL:0000040!9.66e-87!63;CL:0000559!9.66e-87!63;CL:0002009!1.15e-83!65;CL:0000839!2.44e-83!70;CL:0000766!5.35e-79!76;CL:0000557!9.57e-79!71;CL:0002057!1.03e-78!42;CL:0000860!1.14e-72!45;CL:0000763!4.91e-51!112;CL:0000049!4.91e-51!112;CL:0002087!9.42e-47!119;CL:0000738!1.33e-44!140;CL:0002031!2.10e-44!124;CL:0000037!7.78e-35!172;CL:0000566!7.78e-35!172;CL:0000988!1.87e-33!182;CL:0002032!1.37e-32!165;CL:0000837!1.37e-32!165;CL:0000219!8.11e-11!390;CL:0000134!1.10e-10!358;CL:0002320!3.41e-10!365;CL:0002393!8.57e-09!9;CL:0002397!8.57e-09!9;CL:0002619!8.85e-08!3 | |ontology_enrichment_celltype=CL:0002194!9.66e-87!63;CL:0000576!9.66e-87!63;CL:0000040!9.66e-87!63;CL:0000559!9.66e-87!63;CL:0002009!1.15e-83!65;CL:0000839!2.44e-83!70;CL:0000766!5.35e-79!76;CL:0000557!9.57e-79!71;CL:0002057!1.03e-78!42;CL:0000860!1.14e-72!45;CL:0000763!4.91e-51!112;CL:0000049!4.91e-51!112;CL:0002087!9.42e-47!119;CL:0000738!1.33e-44!140;CL:0002031!2.10e-44!124;CL:0000037!7.78e-35!172;CL:0000566!7.78e-35!172;CL:0000988!1.87e-33!182;CL:0002032!1.37e-32!165;CL:0000837!1.37e-32!165;CL:0000219!8.11e-11!390;CL:0000134!1.10e-10!358;CL:0002320!3.41e-10!365;CL:0002393!8.57e-09!9;CL:0002397!8.57e-09!9;CL:0002619!8.85e-08!3 | ||
|ontology_enrichment_celltype_v019=CL:0000860;8.97e-114;33!CL:0002057;8.97e-114;33!CL:0000473;3.37e-102;39!CL:0000234;3.37e-102;39!CL:0000576;1.81e-61;48!CL:0000766;2.75e-44;69!CL:0000763;5.00e-17;100!CL:0002087;1.18e-15;104!CL:0000738;7.09e-14;136!CL:0000235;8.14e-14;6!CL:0002393;4.22e-08;6!CL:0002397;4.22e-08;6!CL:0000988;6.49e-07;177 | |||
|ontology_enrichment_celltype_v019_2=CL:0000473,7.16e-130,48;CL:0000234,7.16e-130,48;CL:0000860,8.81e-117,42;CL:0002057,8.81e-117,42;CL:0002194,5.59e-115,59;CL:0000576,5.59e-115,59;CL:0000040,5.59e-115,59;CL:0000559,5.59e-115,59;CL:0002009,4.59e-111,61;CL:0000839,2.66e-102,66;CL:0000557,1.05e-100,67;CL:0000766,2.28e-93,72;CL:0000763,2.12e-60,108;CL:0000049,2.12e-60,108;CL:0002087,2.32e-56,115;CL:0002031,9.19e-54,120;CL:0000738,1.02e-46,136;CL:0002032,1.72e-38,161;CL:0000837,1.72e-38,161;CL:0000037,1.27e-36,168;CL:0000988,1.96e-34,177;CL:0000235,6.86e-14,6;CL:0000134,7.14e-14,354;CL:0002320,1.80e-13,361;CL:0000219,4.79e-13,386;CL:0000048,2.60e-10,427;CL:0000723,4.53e-10,433;CL:0000034,9.26e-10,441 | |||
|ontology_enrichment_development_v019=CL:0002057;9.15e-86;42!CL:0000049;1.19e-16;108 | |||
|ontology_enrichment_disease= | |||
|ontology_enrichment_disease_v019= | |||
|ontology_enrichment_disease_v019_2= | |||
|ontology_enrichment_uberon=UBERON:0002371!2.46e-68!80;UBERON:0002390!2.38e-64!102;UBERON:0003061!2.38e-64!102;UBERON:0001474!1.35e-62!86;UBERON:0002193!8.09e-62!112;UBERON:0002405!2.80e-53!115;UBERON:0004765!3.29e-51!101;UBERON:0001434!3.29e-51!101;UBERON:0002204!1.33e-26!167;UBERON:0003081!1.84e-24!216;UBERON:0002384!1.59e-09!375;UBERON:0000926!7.56e-07!448;UBERON:0004120!7.56e-07!448;UBERON:0006603!7.56e-07!448 | |||
|ontology_enrichment_uberon_v019= | |||
|ontology_enrichment_uberon_v019_2=UBERON:0002371,3.48e-88,76;UBERON:0001474,2.40e-81,82;UBERON:0004765,1.25e-73,90;UBERON:0002405,4.51e-71,93;UBERON:0002390,3.72e-67,98;UBERON:0003061,3.72e-67,98;UBERON:0001434,1.07e-65,100;UBERON:0002193,2.12e-60,108;UBERON:0002204,7.03e-37,167;UBERON:0003081,3.40e-29,203;UBERON:0000926,1.94e-16,315;UBERON:0004120,1.94e-16,315;UBERON:0006603,1.94e-16,315;UBERON:0002384,6.39e-13,371 | |||
|phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.80490002723128,1.08505435357926,0.671746422719773,0.647787332037959,0.515151135268373,1.16318591023652,4.1566353805769,0.727752183563449,5.81072592264212,21.7918980651568,26.0153351551887,7.48000220037591,20.4928565223281,15.6078271726466,27.2349087781929,80.0401007643944,60.9419189674538,2.07066573496865,12.0078706025452,8.53949240891322,19.2832852193669,55.5207216841642,46.032273057531,0.659702600373432,5.98390972864896,1.27867425159808,16.5419266018293,35.7452691555418,30.5182902007832,11.0549412712967,37.5467701262545,31.2751936375368,7.87019353423379,68.8679179296746,35.1273250059382,0,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.39303789839414,1.19662164466979,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,2.80805118167085,1.48631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | |phase1_expression=0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0764134057479513,0,0,0.786728553697808,0,0.309632246632152,0,0,0,0,0,0,1.10799081706375,1.80490002723128,1.08505435357926,0.671746422719773,0.647787332037959,0.515151135268373,1.16318591023652,4.1566353805769,0.727752183563449,5.81072592264212,21.7918980651568,26.0153351551887,7.48000220037591,20.4928565223281,15.6078271726466,27.2349087781929,80.0401007643944,60.9419189674538,2.07066573496865,12.0078706025452,8.53949240891322,19.2832852193669,55.5207216841642,46.032273057531,0.659702600373432,5.98390972864896,1.27867425159808,16.5419266018293,35.7452691555418,30.5182902007832,11.0549412712967,37.5467701262545,31.2751936375368,7.87019353423379,68.8679179296746,35.1273250059382,0,0,0.419317291016752,0.112328631146495,0,0.16072558669708,0,0.19891667719909,0.182664153764634,0,0,0,0,0,0,0,0,0,0,0,0,0.560508562981536,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.324547393654683,1.39303789839414,1.19662164466979,0.238490624305342,0,0.371457501329565,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.272746120590835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.738651018262192,2.80805118167085,1.48631162288728,0,0,0,0,0,0,0.492663237895943,0,0,0,0,0.063497894292169,0.381988425558278,1.17217447210047,0,0,0.600686115687835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,1.2162378064119,2.51128545716063,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.215714200818617,0.106727557803444,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0920809889358963,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.219259876645935,0,0.256450125116389,0,0,0.103041011647722,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.276283915531148,0,0,0,0,0,0,0,0,0,0,0,0.0927680981618513,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.31900115973192,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.296521128680622,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.201550417460179,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0524545881349981,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.496166021811951,0,0,0,0,0.2506898940227,0,0,0,0,0,0.1251909307065,0,0,0.0620964029413835,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.256241518587947,0,0,0,0,0,0,0,0.245772908753719,0,0.19998739585493,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.227662191351298,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.102662806856247,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.399764623699716,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0,0.0918948995348449,0,0,0,0,0,0,0,0.0645889098360061,0.186224142887574,0,0,0,0,0,0.134704106029175,0,0,0,0,0,0,0,0,0,0,0.201273793591026,0 | ||
|short_description=p8@FNIP2 | |short_description=p8@FNIP2 | ||
}} | }} |
Latest revision as of 11:35, 16 September 2015
Short description: | p8@FNIP2 |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_8_at_FNIP2_5end |
Coexpression cluster: | C0_CD14_Eosinophils_Neutrophils_Basophils_CD34_immature_Peripheral |
Association with transcript: | -346bp_to_ENST00000512986_5end |
EntrezGene: | FNIP2 |
HGNC: | 29280 |
UniProt: | D6RFH5 |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
defensive cell | 7.16e-130 | 48 |
phagocyte | 7.16e-130 | 48 |
classical monocyte | 8.81e-117 | 42 |
CD14-positive, CD16-negative classical monocyte | 8.81e-117 | 42 |
monopoietic cell | 5.59e-115 | 59 |
monocyte | 5.59e-115 | 59 |
monoblast | 5.59e-115 | 59 |
promonocyte | 5.59e-115 | 59 |
macrophage dendritic cell progenitor | 4.59e-111 | 61 |
myeloid lineage restricted progenitor cell | 2.66e-102 | 66 |
granulocyte monocyte progenitor cell | 1.05e-100 | 67 |
myeloid leukocyte | 2.28e-93 | 72 |
myeloid cell | 2.12e-60 | 108 |
common myeloid progenitor | 2.12e-60 | 108 |
nongranular leukocyte | 2.32e-56 | 115 |
hematopoietic lineage restricted progenitor cell | 9.19e-54 | 120 |
leukocyte | 1.02e-46 | 136 |
hematopoietic oligopotent progenitor cell | 1.72e-38 | 161 |
hematopoietic multipotent progenitor cell | 1.72e-38 | 161 |
hematopoietic stem cell | 1.27e-36 | 168 |
hematopoietic cell | 1.96e-34 | 177 |
macrophage | 6.86e-14 | 6 |
mesenchymal cell | 7.14e-14 | 354 |
connective tissue cell | 1.80e-13 | 361 |
motile cell | 4.79e-13 | 386 |
multi fate stem cell | 2.60e-10 | 427 |
somatic stem cell | 4.53e-10 | 433 |
stem cell | 9.26e-10 | 441 |
Ontology term | p-value | n |
---|---|---|
bone marrow | 3.48e-88 | 76 |
bone element | 2.40e-81 | 82 |
skeletal element | 1.25e-73 | 90 |
immune system | 4.51e-71 | 93 |
hematopoietic system | 3.72e-67 | 98 |
blood island | 3.72e-67 | 98 |
skeletal system | 1.07e-65 | 100 |
hemolymphoid system | 2.12e-60 | 108 |
musculoskeletal system | 7.03e-37 | 167 |
lateral plate mesoderm | 3.40e-29 | 203 |
mesoderm | 1.94e-16 | 315 |
mesoderm-derived structure | 1.94e-16 | 315 |
presumptive mesoderm | 1.94e-16 | 315 |
connective tissue | 6.39e-13 | 371 |