FFCP PHASE1:Hg19::chr12:53200945..53200976,-: Difference between revisions
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|id=chr12:53200945..53200976,-
|short_description=p@chr12:53200945..53200976,-
|description=CAGE_peak_at_chr12:53200945..53200976,-
|association_with_transcript=NA
...") |
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{{FFCP | {{FFCP | ||
| | |DHSsupport=supported | ||
| | |DPIdataset=robust | ||
|EntrezGene=NA | |EntrezGene=NA | ||
|GencodeV16b_All_Build2_RSEM10_CPAT_consensus=no_gencodeV16_or_build2_transcript | |||
|HGNC=NA | |HGNC=NA | ||
|TSSclassifier=strong | |||
|UniProt=NA | |UniProt=NA | ||
|association_with_transcript=NA | |||
|cluster_id=chr12:53200945..53200976,- | |||
|coexpression_cluster_id=C60 | |||
|description=CAGE_peak_at_chr12:53200945..53200976,- | |||
|id=chr12:53200945..53200976,- | |||
|ontology_enrichment_celltype=CL:0002368!5.44e-09!13;CL:0002202!8.73e-08!9;CL:0002632!8.73e-08!9 | |||
|ontology_enrichment_celltype_v019= | |||
|ontology_enrichment_celltype_v019_2= | |||
|ontology_enrichment_development_v019=UBERON:0009143;9.99e-30;1!UBERON:0008814;1.54e-15;2!UBERON:0010056;1.54e-15;2 | |||
|ontology_enrichment_disease=DOID:178!8.78e-09!1;DOID:326!8.78e-09!1;DOID:3978!8.78e-09!1;DOID:3394!8.78e-09!1;DOID:5844!8.78e-09!1;DOID:3151!1.18e-08!1;DOID:3149!1.18e-08!1 | |||
|ontology_enrichment_disease_v019=DOID:178;3.64e-29;1!DOID:326;3.64e-29;1!DOID:3978;3.64e-29;1!DOID:3394;3.64e-29;1!DOID:5844;3.64e-29;1!DOID:114;2.55e-15;2!DOID:1287;2.52e-08;4 | |||
|ontology_enrichment_disease_v019_2=DOID:178,4.20e-29,1;DOID:326,4.20e-29,1;DOID:3978,4.20e-29,1;DOID:3394,4.20e-29,1;DOID:5844,4.20e-29,1;DOID:114,2.74e-15,2;DOID:1287,2.61e-08,4 | |||
|ontology_enrichment_uberon=UBERON:0000341!1.35e-15!2;UBERON:0000065!6.58e-12!53;UBERON:0001723!5.32e-11!3;UBERON:0001033!5.32e-11!3;UBERON:0010056!5.32e-11!3;UBERON:0005178!1.49e-09!34;UBERON:0002224!1.49e-09!34;UBERON:0005181!2.96e-09!35;UBERON:0002372!7.01e-09!1;UBERON:0001961!7.01e-09!1;UBERON:0001744!7.01e-09!1;UBERON:0001735!7.01e-09!1;UBERON:0000989!1.48e-08!1;UBERON:0008811!1.48e-08!1;UBERON:0006258!1.48e-08!1;UBERON:0005876!1.48e-08!1;UBERON:0004874!1.48e-08!1;UBERON:0002171!1.84e-08!1;UBERON:0006518!1.84e-08!1;UBERON:0008949!1.84e-08!1;UBERON:0000101!1.84e-08!1;UBERON:0002167!1.84e-08!1;UBERON:0007196!1.96e-08!14;UBERON:0001558!1.96e-08!14;UBERON:0000997!1.98e-08!1;UBERON:0005056!1.98e-08!1;UBERON:0006834!2.29e-08!1;UBERON:0001004!2.49e-08!72;UBERON:0001042!2.69e-07!10;UBERON:0009145!2.69e-07!10;UBERON:0001041!5.33e-07!98;UBERON:0000072!5.44e-07!46 | |||
|ontology_enrichment_uberon_v019=UBERON:0001723;1.80e-38;3!UBERON:0001033;1.80e-38;3!UBERON:0002372;1.78e-29;1!UBERON:0001961;1.78e-29;1!UBERON:0001744;1.78e-29;1!UBERON:0001042;1.78e-29;1!UBERON:0001735;1.78e-29;1!UBERON:0000341;1.15e-15;2!UBERON:0006562;1.78e-15;2!UBERON:0001043;7.42e-11;3!UBERON:0000165;8.05e-10;28 | |||
|ontology_enrichment_uberon_v019_2=UBERON:0001723,1.80e-38,3;UBERON:0001033,1.80e-38,3;UBERON:0010056,1.80e-38,3;UBERON:0002372,1.78e-29,1;UBERON:0001961,1.78e-29,1;UBERON:0001744,1.78e-29,1;UBERON:0001735,1.78e-29,1;UBERON:0001042,4.28e-26,10;UBERON:0009145,4.28e-26,10;UBERON:0006562,8.35e-24,11;UBERON:0000341,1.15e-15,2;UBERON:0001557,3.96e-14,19;UBERON:0000166,2.64e-12,22;UBERON:0001043,7.42e-11,3;UBERON:0009143,7.42e-11,3;UBERON:0000165,1.66e-09,29;UBERON:0000930,1.66e-09,29;UBERON:0007023,3.55e-09,114;UBERON:0000153,8.15e-08,62;UBERON:0007811,8.15e-08,62;UBERON:0000161,8.74e-08,36;UBERON:0008814,2.86e-07,18 | |||
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|short_description=p@chr12:53200945..53200976,- | |||
}} | }} |
Latest revision as of 09:40, 24 July 2015
Short description: | p@chr12:53200945..53200976, - |
---|---|
Species: | Human (Homo sapiens) |
DPI dataset: | Robust |
TSS-like-by-RIKEN-classifier(Yes/No): | Yes |
DHS support(Yes/No): | Yes |
Description: | CAGE_peak_at_chr12:53200945..53200976, - |
Coexpression cluster: | C60_esophagus_tonsil_throat_tongue_uterus_cervix_cervical |
Association with transcript: | NA |
EntrezGene: | NA |
HGNC: | NA |
UniProt: | NA |
Genome view: | ZENBU |
View on UCSC genome browser
CAGE Expression
- Click each plot point to find sample in table
Ontology-based sample term enrichment analysis<b>Summary:</b>This analysis has been performed by utilizing wilcoxon rank sum test.When the number of associated cells/tissues are > n , randomly sampled n cells/tissues are used for P value calculation with rank sum test. this process are repeated several times, and the P values are averaged on the log space <br><b>Analyst:</b> Hideya Kawaji<br><br>link to source dataset<br>data
Ontology term | p-value | n |
---|---|---|
tongue | 1.80e-38 | 3 |
gustatory system | 1.80e-38 | 3 |
future tongue | 1.80e-38 | 3 |
tonsil | 1.78e-29 | 1 |
mucosa-associated lymphoid tissue | 1.78e-29 | 1 |
lymphoid tissue | 1.78e-29 | 1 |
tonsillar ring | 1.78e-29 | 1 |
chordate pharynx | 4.28e-26 | 10 |
pharyngeal region of foregut | 4.28e-26 | 10 |
pharynx | 8.35e-24 | 11 |
throat | 1.15e-15 | 2 |
upper respiratory tract | 3.96e-14 | 19 |
oral opening | 2.64e-12 | 22 |
esophagus | 7.42e-11 | 3 |
esophageal region | 7.42e-11 | 3 |
mouth | 1.66e-09 | 29 |
stomodeum | 1.66e-09 | 29 |
adult organism | 3.55e-09 | 114 |
anterior region of body | 8.15e-08 | 62 |
craniocervical region | 8.15e-08 | 62 |
orifice | 8.74e-08 | 36 |
pharyngeal arch system | 2.86e-07 | 18 |
Ontology term | p-value | n |
---|---|---|
vascular disease | 4.20e-29 | 1 |
ischemia | 4.20e-29 | 1 |
extrinsic cardiomyopathy | 4.20e-29 | 1 |
myocardial ischemia | 4.20e-29 | 1 |
myocardial infarction | 4.20e-29 | 1 |
heart disease | 2.74e-15 | 2 |
cardiovascular system disease | 2.61e-08 | 4 |